-
1
-
-
33947243522
-
Nucleotide sequence of the gyrA gene of Arcobacter species and characterization of human ciprofloxacin-resistant clinical isolates
-
Abdelbaqi, K., Ménard, A., Prouzet-Mauleon, V., Bringaud, F., Lehours, P. & Mégraud, F. (2007). Nucleotide sequence of the gyrA gene of Arcobacter species and characterization of human ciprofloxacin-resistant clinical isolates. FEMS Immunol Med Microbiol 49, 337-345.
-
(2007)
FEMS Immunol Med Microbiol
, vol.49
, pp. 337-345
-
-
Abdelbaqi, K.1
Ménard, A.2
Prouzet-Mauleon, V.3
Bringaud, F.4
Lehours, P.5
Mégraud, F.6
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0030893297
-
The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera
-
Anzai, Y., Kudo, Y. & Oyaizu, H. (1997). The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera. Int J Syst Bacteriol 47, 249-251.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 249-251
-
-
Anzai, Y.1
Kudo, Y.2
Oyaizu, H.3
-
4
-
-
0031872562
-
Diversity and prevalence of Arcobacter spp. in broiler chickens
-
Atabay, H. I., Corry, J. E. L. & On, S. L. W. (1998). Diversity and prevalence of Arcobacter spp. in broiler chickens. J Appl Microbiol 84, 1007-1016.
-
(1998)
J Appl Microbiol
, vol.84
, pp. 1007-1016
-
-
Atabay, H.I.1
Corry, J.E.L.2
On, S.L.W.3
-
5
-
-
0034802336
-
Halomonas maura sp. nov., a novel moderately halophilic, exopolysaccharide-producing bacterium
-
Bouchotroch, S., Quesada, E., del Moral, A., Llamas, I. & Béjar, V. (2001). Halomonas maura sp. nov., a novel moderately halophilic, exopolysaccharide-producing bacterium. Int J Syst Evol Microbiol 51, 1625-1632.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1625-1632
-
-
Bouchotroch, S.1
Quesada, E.2
del Moral, A.3
Llamas, I.4
Béjar, V.5
-
6
-
-
33645210664
-
Tenacibaculum litoreum sp. nov., isolated from tidal flat sediment
-
Choi, D. H., Kim, Y.-G., Hwang, C. Y., Yi, H., Chun, J. & Cho, B. C. (2006). Tenacibaculum litoreum sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 56, 635-640.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 635-640
-
-
Choi, D.H.1
Kim, Y.-G.2
Hwang, C.Y.3
Yi, H.4
Chun, J.5
Cho, B.C.6
-
7
-
-
33846072878
-
-
Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Bandela, A. M., Cardenas, E., Garrity, G. M. & other authors (2007). The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res 35, D169-D172.
-
Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Bandela, A. M., Cardenas, E., Garrity, G. M. & other authors (2007). The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res 35, D169-D172.
-
-
-
-
8
-
-
19544375446
-
Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter
-
Donachie, S. P., Bowman, J. P., On, S. L. W. & Alam, M. (2005). Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter. Int J Syst Evol Microbiol 55, 1271-1277.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1271-1277
-
-
Donachie, S.P.1
Bowman, J.P.2
On, S.L.W.3
Alam, M.4
-
9
-
-
0034525436
-
A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction
-
Englen, M. D. & Kelley, L. C. (2000). A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the polymerase chain reaction. Lett Appl Microbiol 31, 421-426.
-
(2000)
Lett Appl Microbiol
, vol.31
, pp. 421-426
-
-
Englen, M.D.1
Kelley, L.C.2
-
10
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
11
-
-
84959747425
-
Toward defining the course of evolution: Minimum change for a specific tree topology
-
Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
-
(1971)
Syst Zool
, vol.20
, pp. 406-416
-
-
Fitch, W.M.1
-
12
-
-
0025812508
-
Improved method for phenotypical characterization of marine bacteria
-
Hansen, G. H. & Sørheim, R. (1991). Improved method for phenotypical characterization of marine bacteria. J Microbiol Methods 13, 231-241.
-
(1991)
J Microbiol Methods
, vol.13
, pp. 231-241
-
-
Hansen, G.H.1
Sørheim, R.2
-
13
-
-
16844384716
-
Arcobacter cibarius sp. nov., isolated from broiler carcasses
-
Houf, K., On, S. L. W., Coenye, T., Mast, J., Hoof, J. V. & Vandamme, P. (2005). Arcobacter cibarius sp. nov., isolated from broiler carcasses. Int J Syst Evol Microbiol 55, 713-717.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 713-717
-
-
Houf, K.1
On, S.L.W.2
Coenye, T.3
Mast, J.4
Hoof, J.V.5
Vandamme, P.6
-
14
-
-
25144446363
-
jPHYDIT: A JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences
-
Jeon, Y.-S., Chung, H., Park, S., Hur, I., Lee, J.-H. & Chun, J. (2005). jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences. Bioinformatics 21, 3171-3173.
-
(2005)
Bioinformatics
, vol.21
, pp. 3171-3173
-
-
Jeon, Y.-S.1
Chung, H.2
Park, S.3
Hur, I.4
Lee, J.-H.5
Chun, J.6
-
15
-
-
0000732090
-
Evolution of protein molecules
-
Edited by H. N. Munro. New York: Academic Press
-
Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
-
(1969)
Mammalian Protein Metabolism
, vol.3
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
16
-
-
0025967986
-
Campylobacter butzleri sp. nov. isolated from humans and animals with diarrheal illness
-
Kiehlbauch, J. A., Brenner, D. J., Nicholson, M. A., Baker, C. N., Patton, C. M., Steigerwalt, A. G. & Wachsmuth, I. K. (1991). Campylobacter butzleri sp. nov. isolated from humans and animals with diarrheal illness. J Clin Microbiol 29, 376-385.
-
(1991)
J Clin Microbiol
, vol.29
, pp. 376-385
-
-
Kiehlbauch, J.A.1
Brenner, D.J.2
Nicholson, M.A.3
Baker, C.N.4
Patton, C.M.5
Steigerwalt, A.G.6
Wachsmuth, I.K.7
-
17
-
-
3242810318
-
-
Kumar, S., Tamura, K. & Nei, M. (2004). MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
-
Kumar, S., Tamura, K. & Nei, M. (2004). MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
-
-
-
-
18
-
-
0037215982
-
Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea
-
Kwon, S. W., Kim, J. S., Park, I. C., Yoon, S. H., Park, D. H., Lim, C. K. & Go, S. J. (2003). Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. Int J Syst Evol Microbiol 53, 21-27.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 21-27
-
-
Kwon, S.W.1
Kim, J.S.2
Park, I.C.3
Yoon, S.H.4
Park, D.H.5
Lim, C.K.6
Go, S.J.7
-
19
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
20
-
-
0033637595
-
Arcobacter butzleri, A. skirrowii and A. cryaerophilus - potential emerging human pathogens
-
Mansfield, L. P. & Forsythe, S. J. (2000). Arcobacter butzleri, A. skirrowii and A. cryaerophilus - potential emerging human pathogens. Rev Med Microbiol 11, 161-170.
-
(2000)
Rev Med Microbiol
, vol.11
, pp. 161-170
-
-
Mansfield, L.P.1
Forsythe, S.J.2
-
21
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
22
-
-
0000078756
-
Campylobacter nitrofigilis sp. nov., a nitrogen-fixing bacterium associated with roots of Spartina alterniflora
-
McClung, C. R., Patriquin, D. G. & Davis, R. E. (1983). Campylobacter nitrofigilis sp. nov., a nitrogen-fixing bacterium associated with roots of Spartina alterniflora. Int J Syst Bacteriol 33, 605-612.
-
(1983)
Int J Syst Bacteriol
, vol.33
, pp. 605-612
-
-
McClung, C.R.1
Patriquin, D.G.2
Davis, R.E.3
-
23
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
-
Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.B.3
-
24
-
-
0021809465
-
Taxonomic position of Campylobacter cryaerophila sp. nov
-
Neill, S. D., Campbell, J. N., O'Brien, J. J., Weatherup, S. T. C. & Ellis, W. A. (1985). Taxonomic position of Campylobacter cryaerophila sp. nov. Int J Syst Bacteriol 35, 342-356.
-
(1985)
Int J Syst Bacteriol
, vol.35
, pp. 342-356
-
-
Neill, S.D.1
Campbell, J.N.2
O'Brien, J.J.3
Weatherup, S.T.C.4
Ellis, W.A.5
-
25
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame, C., Higgins, D. G. & Heringa, J. (2000). T-Coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol 302, 205-217.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
26
-
-
0029926479
-
A probability matrix for the identification of campylobacters, helicobacters and allied taxa
-
On, S. L. W., Holmes, B. & Sackin, M. J. (1996). A probability matrix for the identification of campylobacters, helicobacters and allied taxa. J Appl Bacteriol 81, 425-432.
-
(1996)
J Appl Bacteriol
, vol.81
, pp. 425-432
-
-
On, S.L.W.1
Holmes, B.2
Sackin, M.J.3
-
27
-
-
0021926546
-
Rapid urea hydrolysis by gastric campylobacters
-
Owen, R. J., Martin, S. R. & Borman, P. (1985). Rapid urea hydrolysis by gastric campylobacters. Lancet 1, 111.
-
(1985)
Lancet
, vol.1
, pp. 111
-
-
Owen, R.J.1
Martin, S.R.2
Borman, P.3
-
28
-
-
0024991596
-
Evaluation of the indoxyl acetate hydrolysis test for rapid differentiation of Campylobacter, Helicobacter, and Wolinella species
-
Popovic-Uroic, T., Patton, C. M., Nicholson, M. A. & Kiehlbauch, J. A. (1990). Evaluation of the indoxyl acetate hydrolysis test for rapid differentiation of Campylobacter, Helicobacter, and Wolinella species. J Clin Microbiol 28, 2335-2339.
-
(1990)
J Clin Microbiol
, vol.28
, pp. 2335-2339
-
-
Popovic-Uroic, T.1
Patton, C.M.2
Nicholson, M.A.3
Kiehlbauch, J.A.4
-
29
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada, D. & Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics 14, 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
30
-
-
66349124987
-
-
3rd edn, section VI, p, Washington, DC: American Society for Microbiology
-
Reddy, C. A., Beveridge, T. J., Brenznak, J. A., Marzluf, G. A., Schmidt, T. M. & Snyder, L. R. (2007). In Methods for General and Molecular Microbiology, 3rd edn, section VI, p. 957. Washington, DC: American Society for Microbiology.
-
(2007)
Methods for General and Molecular Microbiology
, pp. 957
-
-
Reddy, C.A.1
Beveridge, T.J.2
Brenznak, J.A.3
Marzluf, G.A.4
Schmidt, T.M.5
Snyder, L.R.6
-
31
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Edited by S. Krawetz & S. Misener. Totowa, NJ: Humana Press
-
Rozen, S. & Skaletsky, H. (2000). Primer3 on the WWW for general users and for biologist programmers. In Bioinformatics Methods and Protocols: Methods in Molecular Biology, pp. 365-386. Edited by S. Krawetz & S. Misener. Totowa, NJ: Humana Press.
-
(2000)
Bioinformatics Methods and Protocols: Methods in Molecular Biology
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
32
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
33
-
-
19244383951
-
Differentiation of enteropathogenic Campylobacter
-
Skirrow, M. B. & Benjamin, J. (1980). Differentiation of enteropathogenic Campylobacter. J Clin Pathol 33, 1122.
-
(1980)
J Clin Pathol
, vol.33
, pp. 1122
-
-
Skirrow, M.B.1
Benjamin, J.2
-
34
-
-
0000612080
-
Phenotypic characterization
-
Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
-
Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
35
-
-
77949344593
-
-
Swofford, D. L, 2002, PAUP*: Phylogenetic analysis using parsimony and other methods, version 4. Sunderland, MA: Sinauer Associates
-
Swofford, D. L. (2002). PAUP*: Phylogenetic analysis using parsimony (and other methods), version 4. Sunderland, MA: Sinauer Associates.
-
-
-
-
36
-
-
0029851898
-
Molecular identification of bacteria from a coculture by denaturing gradient gel electrophoresis of 16S ribosomal DNA fragments as a tool for isolation in pure cultures
-
Teske, A., Sigalevich, P., Cohen, Y. & Muyzer, G. (1996). Molecular identification of bacteria from a coculture by denaturing gradient gel electrophoresis of 16S ribosomal DNA fragments as a tool for isolation in pure cultures. Appl Environ Microbiol 62, 4210-4215.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 4210-4215
-
-
Teske, A.1
Sigalevich, P.2
Cohen, Y.3
Muyzer, G.4
-
37
-
-
0025960666
-
Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: Emendation of generic descriptions and proposal of Arcobacter gen. nov
-
Vandamme, P., Falsen, E., Rossau, R., Hoste, B., Segers, P., Tytgat, R. & De Ley, J. (1991). Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: emendation of generic descriptions and proposal of Arcobacter gen. nov. Int J Syst Bacteriol 41, 88-103.
-
(1991)
Int J Syst Bacteriol
, vol.41
, pp. 88-103
-
-
Vandamme, P.1
Falsen, E.2
Rossau, R.3
Hoste, B.4
Segers, P.5
Tytgat, R.6
De Ley, J.7
-
38
-
-
0026637182
-
Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens
-
Vandamme, P., Vancanneyt, M., Pot, B., Mels, L., Hoste, B., Dewettinck, D., Vlaes, L., Van Den Borre, C., Higgins, R. & other authors (1992). Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens. Int J Syst Bacteriol 42, 344-356.
-
(1992)
Int J Syst Bacteriol
, vol.42
, pp. 344-356
-
-
Vandamme, P.1
Vancanneyt, M.2
Pot, B.3
Mels, L.4
Hoste, B.5
Dewettinck, D.6
Vlaes, L.7
Van Den Borre, C.8
Higgins, R.9
-
39
-
-
77949419708
-
-
VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, 2, part C, pp. 1145-1146. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 1145-1146. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
-
-
-
40
-
-
77949413982
-
-
VP emend. Vandamme, Falsen, Rossau, Hoste, Dewettinck, Vlaes, Van Den Borre, Higgins, Hommez, Kersters, Butzler and Goossens 1992b, 355. In Bergey's Manual of Systematic Bacteriology, 2nd edn, 2, part C, pp. 1161-1165. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
VP emend. Vandamme, Falsen, Rossau, Hoste, Dewettinck, Vlaes, Van Den Borre, Higgins, Hommez, Kersters, Butzler and Goossens 1992b, 355. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 1161-1165. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
-
-
|