메뉴 건너뛰기




Volumn 81, Issue 11, 2009, Pages 1887-1894

Diversity of hepatitis B and C viruses in Chile

Author keywords

Coalescence; Genotypes; HBV; HCV; Phylogeny

Indexed keywords

ARTICLE; CHILE; CONTROLLED STUDY; DNA EXTRACTION; GENE FREQUENCY; GENOTYPE; HEPATITIS B; HEPATITIS B VIRUS; HEPATITIS C; HEPATITIS C VIRUS; HUMAN; NUCLEOTIDE SEQUENCE; PREVALENCE; RNA EXTRACTION;

EID: 70350434333     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.21607     Document Type: Article
Times cited : (23)

References (48)
  • 1
    • 0030843415 scopus 로고    scopus 로고
    • Molecular epidemiology of hepatitis B virus in Central America reflected in the genetic variability of the small S gene
    • Arauz-Ruiz P, Norder H, Visoná KA, Magnius LO. 1997. Molecular epidemiology of hepatitis B virus in Central America reflected in the genetic variability of the small S gene. J Infect Dis 176:851-858. (Pubitemid 27411025)
    • (1997) Journal of Infectious Diseases , vol.176 , Issue.4 , pp. 851-858
    • Arauz-Ruiz, P.1    Norder, H.2    Visona, K.A.3    Magnius, L.O.4
  • 2
    • 0036330525 scopus 로고    scopus 로고
    • Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America
    • Arauz-Ruiz P, Norder H, Robertson BH, Magnius LO. 2002. Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America. J Gen Virol 83:2059-2073. (Pubitemid 34846468)
    • (2002) Journal of General Virology , vol.83 , Issue.8 , pp. 2059-2073
    • Arauz-Ruiz, P.1    Norder, H.2    Robertson, B.H.3    Magnius, L.O.4
  • 5
    • 32044466951 scopus 로고    scopus 로고
    • Genetic diversity and evolution of hepatitis C virus in the Latin American region
    • DOI 10.1016/S1386-6532(05)00393-8, PII S1386653205003938
    • Cristina J. 2005. Genetic diversity and evolution of hepatitis C virus in the Latin American region. J Clin Virol 34:1-7. (Pubitemid 43197765)
    • (2005) Journal of Clinical Virology , vol.34 , Issue.SUPPL. 2
    • Cristina, J.1
  • 9
    • 40549121636 scopus 로고    scopus 로고
    • Diversity of hepatitis C virus genotype 1b in Buenos Aires, Argentina: Description of a new cluster associated with response to treatment
    • DOI 10.1002/jmv.21112
    • Di Lello F, García G, Kott V, Sookoian S, Campos R. 2008. Diversity of hepatitis C virus genotype 1b in Buenos Aires, Argentina: Description of a new cluster associated with treatment response. J Med Virol 80:619-627. (Pubitemid 351358559)
    • (2008) Journal of Medical Virology , vol.80 , Issue.4 , pp. 619-627
    • Di Lello, F.1    Garcia, G.2    Kott, V.3    Sookoian, S.4    Campos, R.5
  • 10
    • 0036021407 scopus 로고    scopus 로고
    • Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data
    • Drummond AJ, Geoff J, Nicholls K, Rodrigo AG, Solomon W. 2002. Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data. Genetics 161:1307-1320. (Pubitemid 34831453)
    • (2002) Genetics , vol.161 , Issue.3 , pp. 1307-1320
    • Drummond, A.J.1    Nicholls, G.K.2    Rodrigo, A.G.3    Solomon, W.4
  • 11
    • 17744381574 scopus 로고    scopus 로고
    • Bayesian coalescent inference of past population dynamics from molecular sequences
    • DOI 10.1093/molbev/msi103
    • Drummond AJ, Rambaut A, Shapiro B, Pybus OG. 2005. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 22:1185-1192. (Pubitemid 40577756)
    • (2005) Molecular Biology and Evolution , vol.22 , Issue.5 , pp. 1185-1192
    • Drummond, A.J.1    Rambaut, A.2    Shapiro, B.3    Pybus, O.G.4
  • 13
    • 4644305114 scopus 로고    scopus 로고
    • Hepatitis B virus genotypes: Do they play a role in the outcome of HBV infection?
    • Fung SK, Lok AS. 2004. Hepatitis B virus genotypes: Do they play a role in the outcome of HBV infection? Hepatology 40:790-792.
    • (2004) Hepatology , vol.40 , pp. 790-792
    • Fung, S.K.1    Lok, A.S.2
  • 14
    • 1542409024 scopus 로고    scopus 로고
    • Hepatitis C Virus Isolates from Argentina Disclose a Novel Genotype 1-Associated Restriction Pattern
    • DOI 10.1128/JCM.42.3.1298-1301.2004
    • Gismondi MI, Staendner LH, Grinstein S, Guzmán CA, Preciado MV. 2004. Hepatitis C virus isolates from Argentina disclose a novel genotype 1-associated restriction pattern. J Clin Microbiol 42:1298-1301. (Pubitemid 38332873)
    • (2004) Journal of Clinical Microbiology , vol.42 , Issue.3 , pp. 1298-1301
    • Gismondi, M.I.1    Staendner, L.H.2    Grinstein, S.3    Guzman, C.A.4    Preciado, M.V.5
  • 15
    • 2642646226 scopus 로고    scopus 로고
    • Amplification of full-length hepatitis B virus genomes from samples from patients with low levels of viremia: Frequency and functional consequences of PCR-introduced mutations
    • Günther S, Sommer G, Von Breunig F, Iwanska A, Kalinina T, Sterneck M, Will H. 1998. Amplification of full-length hepatitis B virus genomes from samples from patients with low levels of viremia: Frequency and functional consequences of PCR-introduced mutations. J Clin Microbiol 36:531-538. (Pubitemid 28060325)
    • (1998) Journal of Clinical Microbiology , vol.36 , Issue.2 , pp. 531-538
    • Gunther, S.1    Sommer, G.2    Von Breunig, F.3    Iwanska, A.4    Kalinina, T.5    Sterneck, M.6    Will, H.7
  • 16
    • 0026739607 scopus 로고
    • Signature pattern analysis: A method for assessing viral sequence relatedness
    • Korber B, Myers G. 1992. Signature pattern analysis: A method for assessing viral sequence relatedness. AIDS Res Hum Retroviruses 8:1549-1560.
    • (1992) AIDS Res Hum Retroviruses , vol.8 , pp. 1549-1560
    • Korber, B.1    Myers, G.2
  • 17
    • 13844253602 scopus 로고    scopus 로고
    • The Los Alamos hepatitis C sequence database
    • DOI 10.1093/bioinformatics/bth485
    • Kuiken C, Yusim K, Boykin L, Richardson R. 2005. The Los Álamos Hepatitis C sequence database. Bioinformatics 21:379-384. (Pubitemid 40246609)
    • (2005) Bioinformatics , vol.21 , Issue.3 , pp. 379-384
    • Kuiken, C.1    Yusim, K.2    Boykin, L.3    Richardson, R.4
  • 21
    • 0034808767 scopus 로고    scopus 로고
    • Phylogenetic analysis of the hepatitis B virus (HBV) genotype F including Argentine isolates
    • DOI 10.1007/s007050170066
    • Mbayed VA, Barbini L, López JL, Campos RH. 2001. Phylogenetic analysis of the hepatitis B virus (HBV) genotype F including Argentine isolates. Arch Virol 146:1803-1810. (Pubitemid 32925923)
    • (2001) Archives of Virology , vol.146 , Issue.9 , pp. 1803-1810
    • Mbayed, V.A.1    Barbini, L.2    Lopez, J.L.3    Campos, R.H.4
  • 24
    • 4444350948 scopus 로고    scopus 로고
    • Viral gene sequences reveal the variable history of hepatitis C virus infection among countries
    • DOI 10.1086/422606
    • Nakano T, Lu L, Liu P, Pybus OG. 2004. Viral gene sequences reveal the variable history of hepatitis C virus infection among countries. J Infect Dis 190:1098-1108. (Pubitemid 39186797)
    • (2004) Journal of Infectious Diseases , vol.190 , Issue.6 , pp. 1098-1108
    • Nakano, T.1    Lu, L.2    Liu, P.3    Pybus, O.G.4
  • 25
    • 0028301224 scopus 로고
    • Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes
    • DOI 10.1006/viro.1994.1060
    • Norder H, Couroucé AM, Magnius LO. 1994. Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198:489-503. (Pubitemid 124019485)
    • (1994) Virology , vol.198 , Issue.2 , pp. 489-503
    • Norder, H.1    Courouce, A.-M.2    Magnius, L.O.3
  • 26
    • 32044449223 scopus 로고    scopus 로고
    • HBV epidemiology in Latin America
    • Paraná R, Almeida D. 2005. HBV epidemiology in Latin America. J Clin Virol 34:S130-S133.
    • (2005) J Clin Virol , vol.34
    • Paraná, R.1    Almeida, D.2
  • 27
    • 0037784027 scopus 로고    scopus 로고
    • Mechanisms of antiviral treatment efficacy and failure in chronic hepatitis C
    • DOI 10.1016/S0166-3542(03)00088-3
    • Pawlotsky JM. 2003. Mechanisms of antiviral treatment efficacy and failure in chronic hepatitis C. Antiviral Res 59:1-11. (Pubitemid 36773885)
    • (2003) Antiviral Research , vol.59 , Issue.1 , pp. 1-11
    • Pawlotsky, J.-M.1
  • 28
    • 0842303291 scopus 로고    scopus 로고
    • Pathophysiology of hepatitis C virus infection and related liver disease
    • DOI 10.1016/j.tim.2003.12.005
    • Pawlotsky JM. 2004. Pathophysiology of hepatitis C virus infection and related liver disease. Trends Microbiol 12:96-102. (Pubitemid 38167344)
    • (2004) Trends in Microbiology , vol.12 , Issue.2 , pp. 96-102
    • Pawlotsky, J.-M.1
  • 29
    • 0042831274 scopus 로고    scopus 로고
    • Evolutionary history of hepatitis B virus genotype F: An in-depth analysis of Argentine isolates
    • Piñeiro y Leone FG, Mbayed VA, Campos RH. 2003. Evolutionary history of hepatitis B virus genotype F: An in-depth analysis of Argentine isolates. Virus Genes 27:103-110.
    • (2003) Virus Genes , vol.27 , pp. 103-110
    • Piñeiro Y Leone, F.G.1    Mbayed, V.A.2    Campos, R.H.3
  • 31
    • 23044516393 scopus 로고    scopus 로고
    • Genotypic variability of hepatitis viruses associated with chronic infection and the development of hepatocellular carcinoma
    • DOI 10.1097/01.mcg.0000170770.49394.92
    • Pujol FH, Devesa M. 2005. Genotypic variability of hepatitis viruses associated with chronic infection and the development of hepatocellular carcinoma. J Clin Gastroenterol 39:611-618. (Pubitemid 41061268)
    • (2005) Journal of Clinical Gastroenterology , vol.39 , Issue.7 , pp. 611-618
    • Pujol, F.H.1    Devesa, M.2
  • 32
    • 34247335942 scopus 로고    scopus 로고
    • Replacement of hepatitis C virus genotype 1b by genotype 2 over a 10-year period in Venezuela
    • Pujol FH, Loureiro CL. 2007. Replacement of hepatitis C virus genotype 1b by genotype 2 over a 10-year period in Venezuela. J Clin Gastroenterol 41:518-520.
    • (2007) J Clin Gastroenterol , vol.41 , pp. 518-520
    • Pujol, F.H.1    Loureiro, C.L.2
  • 33
    • 33845767874 scopus 로고    scopus 로고
    • A new algorithm for deduction of hepatitis B surface antigen subtype determinants from the amino acid sequence
    • DOI 10.1159/000096312
    • Purdy MA, Talekar G, Swenson P, Araujo A, Fields H. 2007. A new algorithm for deduction of hepatitis B surface antigen subtype determinants from the amino acid sequence. Intervirology 50:45-51. (Pubitemid 46005271)
    • (2007) Intervirology , vol.50 , Issue.1 , pp. 45-51
    • Purdy, M.A.1    Talekar, G.2    Swenson, P.3    Araujo, A.4    Fields, H.5
  • 34
    • 0036093152 scopus 로고    scopus 로고
    • Primate hepatitis B viruses - Genetic diversity, geography and evolution
    • DOI 10.1002/rmv.348
    • Robertson BH, Margolis HS. 2002. Primate hepatitis B viruses - Genetic diversity, geography and evolution. Rev Med Virol 12:133-141. (Pubitemid 34516944)
    • (2002) Reviews in Medical Virology , vol.12 , Issue.3 , pp. 133-141
    • Robertson, B.H.1    Margolis, H.S.2
  • 35
    • 0028793170 scopus 로고
    • Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning
    • Salminen MO, Carr JK, Burke DS, McCutchan FE. 1995. Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res Hum Retroviruses 11:1423-1425.
    • (1995) AIDS Res Hum Retroviruses , vol.11 , pp. 1423-1425
    • Salminen, M.O.1    Carr, J.K.2    Burke, D.S.3    McCutchan, F.E.4
  • 36
    • 0033793521 scopus 로고    scopus 로고
    • Consequences of recombination on traditional phylogenetic analysis
    • Schierup MH, Hein J. 2000. Consequences of recombination on traditional phylogenetic analysis. Genetics 156:879-879 (Pubitemid 30781816)
    • (2000) Genetics , vol.156 , Issue.2 , pp. 879-891
    • Schierup, M.H.1    Hein, J.2
  • 37
    • 0030625755 scopus 로고    scopus 로고
    • Investigation of the pattern of diversity of hepatitis C virus in relation to times of transmission
    • Simmonds P, Smith DB. 1997. Investigation of the pattern of diversity of hepatitis C virus in relation to times of transmission. J Viral Hepat 4:S69-S74.
    • (1997) J Viral Hepat , vol.4
    • Simmonds, P.1    Smith, D.B.2
  • 38
    • 0033039492 scopus 로고    scopus 로고
    • Structural constraints on RNA virus evolution
    • Simmonds P, Smith B. 1999. Structural constraints on RNA virus evolution. J Virol 7:5787-5794. (Pubitemid 29274865)
    • (1999) Journal of Virology , vol.73 , Issue.7 , pp. 5787-5794
    • Simmonds, P.1    Smith, D.B.2
  • 43
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596-1599. (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 44
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882. (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 45
    • 0034862573 scopus 로고    scopus 로고
    • Diversification of hepatitis C viruses in South America reveals a novel genetic lineage
    • DOI 10.1007/s007050170084
    • Vega I, Colina R, García L, Uriarte R, Mogdasy C, Cristina J. 2001. Diversification of hepatitis C viruses in South America reveals a novel genetic lineage. Arch Virol 146:1623-1629. (Pubitemid 32808519)
    • (2001) Archives of Virology , vol.146 , Issue.8 , pp. 1623-1629
    • Vega, I.1    Colina, R.2    Garcia, L.3    Uriarte, R.4    Mogdasy, C.5    Cristina, J.6
  • 48
    • 0034897826 scopus 로고    scopus 로고
    • A novel approach to detecting and measuring recombination: New insights into evolution in viruses, bacteria, and mitochondria
    • Worobey M. 2001. A novel approach to detecting and measuring recombination: New insights into evolution in viruses, bacteria and mitochondria. Mol Biol Evol 18:1425-1434. (Pubitemid 32735090)
    • (2001) Molecular Biology and Evolution , vol.18 , Issue.8 , pp. 1425-1434
    • Worobey, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.