메뉴 건너뛰기




Volumn 36, Issue 2, 1998, Pages 531-538

Amplification of full-length hepatitis B virus genomes from samples from patients with low levels of viremia: Frequency and functional consequences of PCR-introduced mutations

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; HEPATITIS B SURFACE ANTIGEN; HEPATITIS B(E) ANTIGEN; VIRUS DNA;

EID: 2642646226     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.36.2.531-538.1998     Document Type: Article
Times cited : (83)

References (38)
  • 1
    • 0030905343 scopus 로고    scopus 로고
    • Hepatitis B virus polymerase mutations during antiviral therapy in a patient following liver transplantation
    • Aye, T. T., A. Bartholomeusz, T. Shaw, S. Bowden, A. Breschkin, J. McMillan, P. Angus, and S. Locarnini. 1997. Hepatitis B virus polymerase mutations during antiviral therapy in a patient following liver transplantation. J. Hepatol. 26:1148-1153.
    • (1997) J. Hepatol. , vol.26 , pp. 1148-1153
    • Aye, T.T.1    Bartholomeusz, A.2    Shaw, T.3    Bowden, S.4    Breschkin, A.5    McMillan, J.6    Angus, P.7    Locarnini, S.8
  • 2
    • 0028211009 scopus 로고
    • PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates
    • Barnes, W. M. 1994. PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates. Proc. Natl. Acad. Sci. USA 91:2216-2220.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 2216-2220
    • Barnes, W.M.1
  • 3
    • 0025739370 scopus 로고
    • Fidelity of Thermococcus litoralis DNA polymerase (Vent) in PCR determined by denaturing gradient gel electrophoresis
    • Cariello, N. F., J. A. Swenberg, and T. R. Skopek. 1991. Fidelity of Thermococcus litoralis DNA polymerase (Vent) in PCR determined by denaturing gradient gel electrophoresis. Nucleic Acids Res. 19:4193-4198.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 4193-4198
    • Cariello, N.F.1    Swenberg, J.A.2    Skopek, T.R.3
  • 5
    • 0027014940 scopus 로고
    • Secreted placental alkaline phosphatase as a eukaryotic reporter gene
    • Cullen, B. R., and M. H. Malim. 1992. Secreted placental alkaline phosphatase as a eukaryotic reporter gene. Methods Enzymol. 216:326-368.
    • (1992) Methods Enzymol. , vol.216 , pp. 326-368
    • Cullen, B.R.1    Malim, M.H.2
  • 6
    • 0030917946 scopus 로고    scopus 로고
    • Biological characterization of human immunodeficiency virus type I clones derived from different organs of an AIDS patient by long-range PCR
    • Dittmar, M. T., G. Simmons, Y. Donaldson, P. Simmonds, P. R. Clapham, T. F. Schulz, and R. A. Weiss. 1997. Biological characterization of human immunodeficiency virus type I clones derived from different organs of an AIDS patient by long-range PCR. J. Virol. 71:5140-5147.
    • (1997) J. Virol. , vol.71 , pp. 5140-5147
    • Dittmar, M.T.1    Simmons, G.2    Donaldson, Y.3    Simmonds, P.4    Clapham, P.R.5    Schulz, T.F.6    Weiss, R.A.7
  • 7
    • 0002602003 scopus 로고
    • The fidelity of DNA polymerases used in the polymerase chain reaction
    • M. J. McPherson, P. Quirke, and G. R. Taylor (ed.), Oxford University Press, Oxford, England
    • Eckert, K. A., and T. A. Kunkel. 1991. The fidelity of DNA polymerases used in the polymerase chain reaction, p. 225-244. In M. J. McPherson, P. Quirke, and G. R. Taylor (ed.), PCR: a practical approach. Oxford University Press, Oxford, England.
    • (1991) PCR: A Practical Approach , pp. 225-244
    • Eckert, K.A.1    Kunkel, T.A.2
  • 9
    • 0002167717 scopus 로고
    • Demonstration of the Expand PCR system's greater fidelity and higher yields with a lacI-based PCR fidelity assay
    • Frey, B., and B. Suppmann. 1995. Demonstration of the Expand PCR system's greater fidelity and higher yields with a lacI-based PCR fidelity assay. Biochem. Inf. 2:34-35.
    • (1995) Biochem. Inf. , vol.2 , pp. 34-35
    • Frey, B.1    Suppmann, B.2
  • 10
    • 0018728052 scopus 로고
    • Nucleotide sequence of the hepatitis B genome (subtype ayw) cloned in E. coli
    • Galibert, F., E. Mandart, F. Fitoussi, P. Tiollais, and P. Charnay. 1979. Nucleotide sequence of the hepatitis B genome (subtype ayw) cloned in E. coli. Nature (London) 281:646-650.
    • (1979) Nature (London) , vol.281 , pp. 646-650
    • Galibert, F.1    Mandart, E.2    Fitoussi, F.3    Tiollais, P.4    Charnay, P.5
  • 11
    • 0029610298 scopus 로고
    • Infectious transcripts of tick-borne encephalitis virus, generated in days by RT-PCR
    • Gritsun, T. S., and E. A. Gould. 1995. Infectious transcripts of tick-borne encephalitis virus, generated in days by RT-PCR. Virology 214:611-618.
    • (1995) Virology , vol.214 , pp. 611-618
    • Gritsun, T.S.1    Gould, E.A.2
  • 12
    • 0029786768 scopus 로고    scopus 로고
    • Accumulation and persistence of hepatitis B virus core gene deletion mutants in renal transplant patients are associated with end-stage liver disease
    • Günther, S., S. Baginski, H. Kissel, P. Reinke, D. H. Krüger, H. Will, and H. Meisel. 1996. Accumulation and persistence of hepatitis B virus core gene deletion mutants in renal transplant patients are associated with end-stage liver disease. Hepatology 24:751-758.
    • (1996) Hepatology , vol.24 , pp. 751-758
    • Günther, S.1    Baginski, S.2    Kissel, H.3    Reinke, P.4    Krüger, D.H.5    Will, H.6    Meisel, H.7
  • 13
    • 0029082116 scopus 로고
    • A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients
    • Günther, S., B. C. Li, S. Miska, D. H. Krüger, H. Meisel, and H. Will. 1995. A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients. J. Virol. 69:5437-5444.
    • (1995) J. Virol. , vol.69 , pp. 5437-5444
    • Günther, S.1    Li, B.C.2    Miska, S.3    Krüger, D.H.4    Meisel, H.5    Will, H.6
  • 14
    • 0029914072 scopus 로고    scopus 로고
    • Type, prevalence, and significance of core promoter/enhancer II mutations in hepatitis B viruses from immunosuppressed patients with severe liver disease
    • Günther, S., N. Piwon, A. Iwanska, R. Schilling, H. Meisel, and H. Will. 1996. Type, prevalence, and significance of core promoter/enhancer II mutations in hepatitis B viruses from immunosuppressed patients with severe liver disease. J. Virol. 70:8318-8331.
    • (1996) J. Virol. , vol.70 , pp. 8318-8331
    • Günther, S.1    Piwon, N.2    Iwanska, A.3    Schilling, R.4    Meisel, H.5    Will, H.6
  • 15
    • 0031585536 scopus 로고    scopus 로고
    • Heterogeneity and common features of defective hepatitis B virus genomes derived from spliced pregenomic RNA
    • Günther, S., G. Sommer, A. Iwanska, and H. Will. 1997. Heterogeneity and common features of defective hepatitis B virus genomes derived from spliced pregenomic RNA. Virology 238:363-371.
    • (1997) Virology , vol.238 , pp. 363-371
    • Günther, S.1    Sommer, G.2    Iwanska, A.3    Will, H.4
  • 16
    • 0024373156 scopus 로고
    • Interferon inhibits hepatitis B virus replication in a stable expression system of transfected viral DNA
    • Hayashi, Y., and K. Koike. 1989. Interferon inhibits hepatitis B virus replication in a stable expression system of transfected viral DNA. J. Virol. 63:2936-2940.
    • (1989) J. Virol. , vol.63 , pp. 2936-2940
    • Hayashi, Y.1    Koike, K.2
  • 17
    • 0029590165 scopus 로고
    • Infectious proviral clones of chimpanzee foamy virus (SFVcpz) generated by long PCR reveal close functional relatedness to human foamy virus
    • Herchenröder, O., R. Turek, D. Neumann-Haefelin, A. Rethwilm, and J. Schneider. 1995. Infectious proviral clones of chimpanzee foamy virus (SFVcpz) generated by long PCR reveal close functional relatedness to human foamy virus. Virology 214:685-689.
    • (1995) Virology , vol.214 , pp. 685-689
    • Herchenröder, O.1    Turek, R.2    Neumann-Haefelin, D.3    Rethwilm, A.4    Schneider, J.5
  • 18
    • 0031012987 scopus 로고    scopus 로고
    • High-fidelity PCR amplification of infectious copies of the complete simian virus 40 genome from plasmids and virus-infected cell lysates
    • Lednicky, J. A., S. Jafar, C. Wong, and J. S. Butel. 1997. High-fidelity PCR amplification of infectious copies of the complete simian virus 40 genome from plasmids and virus-infected cell lysates. Gene 184:189-195.
    • (1997) Gene , vol.184 , pp. 189-195
    • Lednicky, J.A.1    Jafar, S.2    Wong, C.3    Butel, J.S.4
  • 19
    • 0029815110 scopus 로고    scopus 로고
    • Selection of mutations in the hepatitis B virus polymerase during therapy of transplant recipients with lamivudine
    • Ling, R., D. Mutimer, N. Ahmed, E. H. Boxall, E. Elias, G. M. Dusheiko, and T. J. Harrison. 1996. Selection of mutations in the hepatitis B virus polymerase during therapy of transplant recipients with lamivudine. Hepatology 24:711-713.
    • (1996) Hepatology , vol.24 , pp. 711-713
    • Ling, R.1    Mutimer, D.2    Ahmed, N.3    Boxall, E.H.4    Elias, E.5    Dusheiko, G.M.6    Harrison, T.J.7
  • 20
    • 0029976492 scopus 로고    scopus 로고
    • Hepatitis B virus variants with core gene deletions in the evolution of chronic hepatitis B infection
    • Marinos, G., F. Torre, S. Günther, M. G. Thomas, H. Will, R. Williams, and N. V. Naoumov. 1996. Hepatitis B virus variants with core gene deletions in the evolution of chronic hepatitis B infection. Gastroenterology 111:183-192.
    • (1996) Gastroenterology , vol.111 , pp. 183-192
    • Marinos, G.1    Torre, F.2    Günther, S.3    Thomas, M.G.4    Will, H.5    Williams, R.6    Naoumov, N.V.7
  • 21
    • 0026598059 scopus 로고
    • Genetic alterations in the gene encoding the major HBsAg: DNA and immunological analysis of recurrent HBsAg derived from monoclonal antibody-treated liver transplant patients
    • McMahon, G., P. H. Ehrlich, Z. A. Moustafa, L. A. McCarthy, D. Dottavio, M. D. Tolpin, P. I. Nadler, and L. Ostberg. 1992. Genetic alterations in the gene encoding the major HBsAg: DNA and immunological analysis of recurrent HBsAg derived from monoclonal antibody-treated liver transplant patients. Hepatology 15:757-766.
    • (1992) Hepatology , vol.15 , pp. 757-766
    • McMahon, G.1    Ehrlich, P.H.2    Moustafa, Z.A.3    McCarthy, L.A.4    Dottavio, D.5    Tolpin, M.D.6    Nadler, P.I.7    Ostberg, L.8
  • 22
    • 0030225455 scopus 로고    scopus 로고
    • Hepatitis B virus replication - An update
    • Nassal, M., and H. Schaller. 1996. Hepatitis B virus replication - an update. J. Viral Hepat. 3:217-226.
    • (1996) J. Viral Hepat. , vol.3 , pp. 217-226
    • Nassal, M.1    Schaller, H.2
  • 23
    • 0028301224 scopus 로고
    • Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes
    • Norder, H., A. M. Courouce, and L. O. Magnius. 1994. Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198:489-503.
    • (1994) Virology , vol.198 , pp. 489-503
    • Norder, H.1    Courouce, A.M.2    Magnius, L.O.3
  • 24
    • 0025739721 scopus 로고
    • Mutations in the precore region of hepatitis B virus DNA in patients with fulminant and severe hepatitis
    • Omata, M., T. Ehata, O. Yokosuka, K. Hosoda, and M. Ohto. 1991. Mutations in the precore region of hepatitis B virus DNA in patients with fulminant and severe hepatitis. N. Engl. J. Med. 324:1699-1704.
    • (1991) N. Engl. J. Med. , vol.324 , pp. 1699-1704
    • Omata, M.1    Ehata, T.2    Yokosuka, O.3    Hosoda, K.4    Ohto, M.5
  • 25
    • 0030979383 scopus 로고    scopus 로고
    • A hepatitis B virus mutant with a new hepatocyte nuclear factor 1 binding site emerging in transplant-transmitted fulminant hepatitis B
    • Pult, I., T. Chouard, S. Wieland, R. Klemenz, M. Yaniv, and H. E. Blum. 1997. A hepatitis B virus mutant with a new hepatocyte nuclear factor 1 binding site emerging in transplant-transmitted fulminant hepatitis B. Hepatology 25:1507-1515.
    • (1997) Hepatology , vol.25 , pp. 1507-1515
    • Pult, I.1    Chouard, T.2    Wieland, S.3    Klemenz, R.4    Yaniv, M.5    Blum, H.E.6
  • 26
    • 0025061039 scopus 로고
    • Mutational analysis of the hepatitis B virus P gene product: Domain structure and RNase H activity
    • Radziwill, G., W. Tucker, and H. Schaller. 1990. Mutational analysis of the hepatitis B virus P gene product: domain structure and RNase H activity. J. Virol. 64:613-620.
    • (1990) J. Virol. , vol.64 , pp. 613-620
    • Radziwill, G.1    Tucker, W.2    Schaller, H.3
  • 27
    • 0025800107 scopus 로고
    • Pregenomic RNA encapsidation analysis of eleven missense and nonsense polymerase mutants of human hepatitis B virus
    • Roychoudhury, S., A. F. Faruqi, and C. Shih. 1991. Pregenomic RNA encapsidation analysis of eleven missense and nonsense polymerase mutants of human hepatitis B virus. J. Virol. 65:3617-3624.
    • (1991) J. Virol. , vol.65 , pp. 3617-3624
    • Roychoudhury, S.1    Faruqi, A.F.2    Shih, C.3
  • 28
    • 0028885704 scopus 로고
    • Recovery of virtually full-length HIV-1 provirus of diverse subtypes from primary virus cultures using the polymerase chain reaction
    • Salminen, M. O., C. Koch, E. Sanders-Buell, P. K. Ehrenberg, N. L. Michael, J. K. Carr, D. S. Burke, and F. E. McCutchan. 1995. Recovery of virtually full-length HIV-1 provirus of diverse subtypes from primary virus cultures using the polymerase chain reaction. Virology 213:80-86.
    • (1995) Virology , vol.213 , pp. 80-86
    • Salminen, M.O.1    Koch, C.2    Sanders-Buell, E.3    Ehrenberg, P.K.4    Michael, N.L.5    Carr, J.K.6    Burke, D.S.7    McCutchan, F.E.8
  • 29
    • 0031048979 scopus 로고    scopus 로고
    • Accumulation of defective viral genomes in peripheral blood mononuclear cells of human immunodeficiency virus type 1-infected individuals
    • Sanchez, G., X. Xu, J. C. Chermann, and I. Hirsch. 1997. Accumulation of defective viral genomes in peripheral blood mononuclear cells of human immunodeficiency virus type 1-infected individuals. J. Virol. 71:2233-2240.
    • (1997) J. Virol. , vol.71 , pp. 2233-2240
    • Sanchez, G.1    Xu, X.2    Chermann, J.C.3    Hirsch, I.4
  • 31
    • 2642617899 scopus 로고    scopus 로고
    • A new class of defective hepatitis B virus genomes with an internal poly(dA) sequence
    • in press
    • Sommer, G., S. Günther, M. Sterneck, S. Otto, and H. Will. A new class of defective hepatitis B virus genomes with an internal poly(dA) sequence. Virology, in press.
    • Virology
    • Sommer, G.1    Günther, S.2    Sterneck, M.3    Otto, S.4    Will, H.5
  • 32
  • 33
    • 0029126735 scopus 로고
    • Generation of entire human papillomavirus genomes by long PCR: Frequency of errors produced during amplification
    • Stewart, A. C., P. E. Gravitt, S. Cheng, and C. M. Wheeler. 1995. Generation of entire human papillomavirus genomes by long PCR: frequency of errors produced during amplification. Genome Res. 5:79-88.
    • (1995) Genome Res. , vol.5 , pp. 79-88
    • Stewart, A.C.1    Gravitt, P.E.2    Cheng, S.3    Wheeler, C.M.4
  • 34
    • 0029973962 scopus 로고    scopus 로고
    • Two types of defective human T-lymphotropic virus type I provirus in adult T-cell leukemia
    • Tamiya, S., M. Matsuoka, K. Etoh, T. Watanabe, S. Kamihira, K. Yamaguchi, and K. Takatsuki. 1996. Two types of defective human T-lymphotropic virus type I provirus in adult T-cell leukemia. Blood 88:3065-3073.
    • (1996) Blood , vol.88 , pp. 3065-3073
    • Tamiya, S.1    Matsuoka, M.2    Etoh, K.3    Watanabe, T.4    Kamihira, S.5    Yamaguchi, K.6    Takatsuki, K.7
  • 35
    • 0029956369 scopus 로고    scopus 로고
    • Long PCR and its application to hepatitis viruses: Amplification of hepatitis A, hepatitis B, and hepatitis C virus genomes
    • Tellier, R., J. Bukh, S. U. Emerson, R. H. Miller, and R. H. Purcell. 1996. Long PCR and its application to hepatitis viruses: amplification of hepatitis A, hepatitis B, and hepatitis C virus genomes. J. Clin. Microbiol. 34:3085-3091.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 3085-3091
    • Tellier, R.1    Bukh, J.2    Emerson, S.U.3    Miller, R.H.4    Purcell, R.H.5
  • 36
    • 0029862966 scopus 로고    scopus 로고
    • Amplification of the full-length hepatitis a virus genome by long reverse transcription-PCR and transcription of infectious RNA directly from the amplicon
    • Tellier, R., J. Bukh, S. U. Emerson, and R. H. Purcell. 1996. Amplification of the full-length hepatitis A virus genome by long reverse transcription-PCR and transcription of infectious RNA directly from the amplicon. Proc. Natl. Acad. Sci. USA 93:4370-4373.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 4370-4373
    • Tellier, R.1    Bukh, J.2    Emerson, S.U.3    Purcell, R.H.4
  • 37
    • 0024282746 scopus 로고
    • Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase
    • Tindall, K. R., and T. A. Kunkel. 1988. Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase. Biochemistry 27:6008-6013.
    • (1988) Biochemistry , vol.27 , pp. 6008-6013
    • Tindall, K.R.1    Kunkel, T.A.2
  • 38
    • 0029817898 scopus 로고    scopus 로고
    • Mutation in HBV RNA-dependent DNA polymerase confers resistance to lamivudine in vivo
    • Tipples, G. A., M. M. Ma, K. P. Fischer, V. G. Bain, N. M. Kneteman, and D. Tyrrell. 1996. Mutation in HBV RNA-dependent DNA polymerase confers resistance to lamivudine in vivo. Hepatology 24:714-717.
    • (1996) Hepatology , vol.24 , pp. 714-717
    • Tipples, G.A.1    Ma, M.M.2    Fischer, K.P.3    Bain, V.G.4    Kneteman, N.M.5    Tyrrell, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.