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Volumn 47, Issue , 2009, Pages 105-131

The biology of viroid-host interactions

Author keywords

Chloroplast; Evolution; Plasmodesmata; Rna replication; Rna silencing; Rna trafficking

Indexed keywords

VIRUS RNA;

EID: 70350220614     PISSN: 00664286     EISSN: None     Source Type: Book Series    
DOI: 10.1146/annurev-phyto-080508-081927     Document Type: Article
Times cited : (255)

References (145)
  • 1
    • 52649140093 scopus 로고    scopus 로고
    • Formation of an. RNA polymerase II preinitiation complex on an. RNA promoter derived from the hepatitis delta virus RNA genome
    • Abrahem A, PelchatM. 2008 Formation of an. RNA polymerase II preinitiation complex on an. RNA promoter derived from the hepatitis delta virus RNA genome. Nucleic Acids Res. 36:5201-5211
    • (2008) Nucleic Acids Res. , vol.36 , pp. 5201-5211
    • Abrahem, A.1    Pelchat, M.2
  • 2
    • 39749083343 scopus 로고    scopus 로고
    • Nuclear targeting by fragmentation of the potato spindle tuber viroid genome
    • Abraitiene A, Zhao Y, Hammond R. 2008 Nuclear targeting by fragmentation of the potato spindle tuber viroid genome. Biochem. Biophys. Res. Commun. 368:470-477
    • (2008) Biochem. Biophys. Res. Commun. , vol.368 , pp. 470-477
    • Abraitiene, A.1    Zhao, Y.2    Hammond, R.3
  • 4
    • 33947543880 scopus 로고    scopus 로고
    • Dynamics of a mobile RNA of potato involved in a long-distance signaling pathway
    • DOI 10.1105/tpc.106.042473
    • Banerjee AK, Chatterjee M, Yu Y, Suh SG, Miller WA, Hannapei DJ. 2006. Dynamics of a mobile RNA of potato involved, in a long-distance signaling padiway. Plant Cell 18:3443-3445 (Pubitemid 46464904)
    • (2006) Plant Cell , vol.18 , Issue.12 , pp. 3443-3457
    • Banerjee, A.K.1    Chatterjee, M.2    Yu, Y.3    Suh, S.-G.4    Miller, W.A.5    Hannapel, D.J.6
  • 5
    • 19244375613 scopus 로고    scopus 로고
    • Viroid processing: Switch from cleavage to ligation is driven by a change from a tetraloop to a loop e conformation
    • DOI 10.1093/emboj/16.3.599
    • Baumstark T, Schröder AR, Riesner D. 1997. Viroid processing: switch from cleavage to ligation is driven by a change from a tetraloop to a loop E conformation. EMBOJ. 16:599-661 (Pubitemid 27067789)
    • (1997) EMBO Journal , vol.16 , Issue.3 , pp. 599-610
    • Baumstark, T.1    Schroder, A.R.W.2    Riesner, D.3
  • 6
    • 0003827689 scopus 로고
    • Ultraviolet light-induced crosslinking reveals a unique region of local tertiaiy structure in potato spindle tuber viroid and HeLa 5S RNA
    • Branch AD, Benenfeld BJ, Robertson HD. 1985 Ultraviolet light-induced crosslinking reveals a unique region of local tertiaiy structure in potato spindle tuber viroid and HeLa 5S RNA. Proc. Natl. Acad. Sci. USA 82:6590-6599
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 6590-6599
    • Branch, A.D.1    Benenfeld, B.J.2    Robertson, H.D.3
  • 7
    • 0021351807 scopus 로고
    • A replication cycle for viroids and other small infectious RNAs
    • Branch AD, Robertson HD. 1984 A replication cycle for viroids and other small infectious RNAs. Science 223:450-455
    • (1984) Science , vol.223 , pp. 450-455
    • Branch, A.D.1    Robertson, H.D.2
  • 8
    • 0242422453 scopus 로고    scopus 로고
    • Subcellular localization and rolling circle replication of peach latent mosaic viroid: Hallmarks of group A viroids
    • Bussière F, Lehoux J, Thompson DA, Skrzeczkowski LJ, Perreault J. 1999. Subcellular localization and rolling circle replication of peach, latent mosaic viroid: hallmarks of group A. viroids. J. Virol. 73:63 53-56 (Pubitemid 29327812)
    • (1999) Journal of Virology , vol.73 , Issue.8 , pp. 6353-6360
    • Bussiere, F.1    Lehoux, J.2    Thompson, D.A.3    Skrzeczkowski, L.J.4    Perreault, J.-P.5
  • 9
    • 37849007348 scopus 로고    scopus 로고
    • Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families
    • Carbonell A, Martinez de Alba AE, Flores R, Gago S. 2008 Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families. Virology 371:44-45
    • (2008) Virology , vol.371 , pp. 44-45
    • Carbonell, A.1    De Martinez Alba, A.E.2    Flores, R.3    Gago, S.4
  • 10
    • 17744364327 scopus 로고    scopus 로고
    • Gardening the genome: DNA methylation in Arabidopsis thaliana
    • Chan SW, Henderson IR, Jacobsen SE. 2005 Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat. Rev. Genet. 6:351-356
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 351-356
    • Chan, S.W.1    Henderson, I.R.2    Jacobsen, S.E.3
  • 11
    • 35348996554 scopus 로고    scopus 로고
    • Specialization and evolution of endogenous small RNA pathways
    • Chapman EJ, Carrington JC. 2007 Specialization and evolution of endogenous small RNA pathways. Nat. Rev. Genet. 8:884-889
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 884-889
    • Chapman, E.J.1    Carrington, J.C.2
  • 12
    • 33846018059 scopus 로고    scopus 로고
    • The fittest versus the flattest: Experimental confirmation of the quasispecies effect with subviral pathogens
    • Codoñer FM, Daròs JA, Solé RV, Elena SF. 2006 The fittest versus the flattest: experimental confirmation of the quasispecies effect with subviral pathogens. PLoS Pathog. 2:e13
    • (2006) PLoS Pathog. , vol.2
    • Codoñer, F.M.1    Daròs, J.A.2    Solé, R.V.3    Elena, S.F.4
  • 13
    • 0034747716 scopus 로고    scopus 로고
    • Natural 2',5'-phosphodiester bonds found at the ligation sites of peach, latent mosaic viroid
    • Côté F, Lévesque D, Perreault JP. 2001 Natural 2',5'-phosphodiester bonds found at the ligation sites of peach, latent mosaic viroid. J. Virol. 7 5:19-22
    • (2001) J. Virol. , vol.75 , pp. 19-22
    • Côté, F.1    Lévesque, D.2    Perreault, J.P.3
  • 14
    • 0031592936 scopus 로고    scopus 로고
    • Peach latent mosaic viroid is locked by a 2'5'-phosphodiester bond produced by in vitro self-ligation
    • DOI 10.1006/jmbi.1997.1355
    • Côté F, Perreault JP. 1997. Peach latent mosaic viroid is locked by a 2',5'-phosphodiester bond, produced by in vitro self-ligation. 7. Mol. Biol. 273:533-534 (Pubitemid 27488797)
    • (1997) Journal of Molecular Biology , vol.273 , Issue.3 , pp. 533-543
    • Cote, F.1    Perreault, J.-P.2
  • 15
    • 0037083859 scopus 로고    scopus 로고
    • A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerheadmediated self-cleavage
    • Daròs JA, Flores R. 2 002 A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerheadmediated self-cleavage. EMBOJ. 21:749-755
    • (2002) EMBOJ. , vol.21 , pp. 749-755
    • Daròs, J.A.1    Flores, R.2
  • 16
    • 2342572422 scopus 로고    scopus 로고
    • Arabidopsis thaliana has the enzymatic machinery for replicating representative viroid species of the family Pospiviroidae
    • DOI 10.1073/pnas.0401090101
    • Daròs JA, Flores R. 2004. Arabidopsis thaliana has the enzymatic machinery for replicating representative viroid species of die family Pospiviroidae. Proc. Natl. Acad. Sci. USA 101:6792-6799 (Pubitemid 38586053)
    • (2004) Proceedings of the National Academy of Sciences of the United States of America , vol.101 , Issue.17 , pp. 6792-6797
    • Daros, J.-A.1    Flores, R.2
  • 17
    • 0142105383 scopus 로고    scopus 로고
    • Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity
    • DOI 10.1093/emboj/cdg530
    • de la Peña M, Gago S, Flores R. 2003. Peripheral regions of natural hammerhead ribozymes gready increase their self-cleavage activity. EMBOJ. 22:5561-5567 (Pubitemid 37279965)
    • (2003) EMBO Journal , vol.22 , Issue.20 , pp. 5561-5570
    • De La Peña, M.1    Gago, S.2    Flores, R.3
  • 18
    • 26444573153 scopus 로고    scopus 로고
    • A short double-stranded RNA motif of Peach latent mosaic viroid contains the initiation and the self-cleavage sites of both polarity strands
    • DOI 10.1128/JVI.79.20.12934-12943.2005
    • Delgado S, Martínez de Alba AE, Hernández C, Flores R. 2005. A short double-stranded RNA motif of peach latent mosaic viroid contains the initiation and the self-cleavage sites of both polarity strands. J Virol. 79:12934-12944 (Pubitemid 41433212)
    • (2005) Journal of Virology , vol.79 , Issue.20 , pp. 12934-12943
    • Delgado, S.1    Martínez De Alba, A.E.2    Hernandez, C.3    Flores, R.4
  • 19
    • 0016202080 scopus 로고
    • Role of deoxyribonucleic acid-ribonucleic acid hybrids in eukaryotes. Synthetic ribo- And deoxyribopolynucleotides as template for yeast ribonucleic acid polymerase B (or II)
    • Dezelee S, Sentenac A, Fromageot P. 1974 Role of deoxyribonucleic acid-ribonucleic acid hybrids in eukaryotes. Synthetic ribo- and deoxyribopolynucleotides as template for yeast ribonucleic acid polymerase B (or II)J. Biol, Chem. 249:5978-5988
    • (1974) J. Biol, Chem. , vol.249 , pp. 5978-5988
    • Dezelee, S.1    Sentenac, A.2    Fromageot, P.3
  • 20
    • 48949089963 scopus 로고    scopus 로고
    • Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis
    • Diaz-Pendon JA, Ding SW. 2008 Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis. Annu. Rev. Phytopathol. 46:303-312
    • (2008) Annu. Rev. Phytopathol. , vol.46 , pp. 303-312
    • Diaz-Pendon, J.A.1    Ding, S.W.2
  • 21
    • 0343666826 scopus 로고
    • Viroid processing: A model involving the central conserved region and hairpin i
    • Diener TO. 1986 Viroid processing: a model involving the central conserved region and hairpin I. Proc. Natl, Acad. Sci. USA 83:58-66
    • (1986) Proc. Natl, Acad. Sci. USA , vol.83 , pp. 58-66
    • Diener, T.O.1
  • 22
    • 0027431086 scopus 로고
    • Mechanism of viroid pathogenesis: Differential activation of the interferon-induced, double-stranded RNA-activated, M(r) 68 000 protein kinase by viroid strains of varying pathogenicity
    • DOI 10.1016/0300-9084(93)90058-Z
    • Diener TO, Hammond RW, Black T, Katze MG. 1993. Mechanism of viroid pathogenesis: differential activation of the interferon-induced, double-stranded RNA-activated, M(r) 68,000 protein kinase by viroid strains of varying pathogenicity. Biochimie 75:533-543 (Pubitemid 23305216)
    • (1993) Biochimie , vol.75 , Issue.7 , pp. 533-538
    • Diener, T.O.1    Hammond, R.W.2    Black, T.3    Katze, M.G.4
  • 24
    • 34547859662 scopus 로고    scopus 로고
    • Control of directional macromolecular trafficking across specific cellular boundaries: A key to integrative plant biology
    • DOI 10.1111/j.1672-9072.2007.00542.x
    • Ding B, Itaya A. 2007. Control of directional macromoleclar trafficking across specific cellular boundaries: a key to integrative plant biology. J. Integr. PlantBiol. 49:1227-1233 (Pubitemid 47261924)
    • (2007) Journal of Integrative Plant Biology , vol.49 , Issue.8 , pp. 1227-1234
    • Ding, B.1    Itaya, A.2
  • 25
    • 33845723170 scopus 로고    scopus 로고
    • Viroid: A useful model for studying the basic principles of infection and RNA biology
    • DOI 10.1094/MPMI-20-0007
    • Ding B, Itaya A. 2007. Viroid: a useful model for studying the basic principles of infection and RNA biology. Mol. Plant-Microbe Interact. 20:7-12 (Pubitemid 44970428)
    • (2007) Molecular Plant-Microbe Interactions , vol.20 , Issue.1 , pp. 7-20
    • Ding, B.1    Itaya, A.2
  • 26
    • 26844577656 scopus 로고    scopus 로고
    • Viroid trafficking: A small RNA makes a big move
    • DOI 10.1016/j.pbi.2005.09.001, PII S1369526605001251
    • Ding B, Itaya A, Zhong X. 2005. Viroid trafficking: a small RNA makes a big move. Curt: Opin, Plant Biol. 8:606-611 (Pubitemid 41446912)
    • (2005) Current Opinion in Plant Biology , vol.8 , Issue.6 , pp. 606-612
    • Ding, B.1    Itaya, A.2    Zhong, X.3
  • 27
    • 0031260005 scopus 로고    scopus 로고
    • Cell-to-cell movement of potato spindle tuber viroid
    • Ding B, Kwon MO, Hammond R, Owens R. 1997. Cell-to-cell movement of potato spindle tuber viroid. Plant J. 12:931-933 (Pubitemid 27484498)
    • (1997) Plant Journal , vol.12 , Issue.4 , pp. 931-936
    • Ding, B.1    Kwon, M.-O.2    Hammond, R.3    Owens, R.4
  • 29
    • 34547587566 scopus 로고    scopus 로고
    • Antiviral Immunity Directed by Small RNAs
    • DOI 10.1016/j.cell.2007.07.039, PII S0092867407009774
    • Ding SW, Voinnet O. 2007. Antiviral immunity directed by small RNAs. Cell 130:413-422 (Pubitemid 47198311)
    • (2007) Cell , vol.130 , Issue.3 , pp. 413-426
    • Ding, S.-W.1    Voinnet, O.2
  • 30
    • 0037062949 scopus 로고    scopus 로고
    • The chemical repertoire of natural ribozymes
    • Doudna JA, Cech TR. 2002 The chemical repertoire of natural ribozymes. Nature 418:222-232
    • (2002) Nature , vol.418 , pp. 222-232
    • Doudna, J.A.1    Cech, T.R.2
  • 31
    • 59649130342 scopus 로고    scopus 로고
    • Structure-function analysis of the ribozymes of chiysandiemum chlorotic mottle viroid: A loop-loop interaction motif conserved in most natural hammerheads
    • Dufour D, de la Peña M, Gago S, Flores R, GallegoJ. 2008 Structure-function analysis of the ribozymes of chiysandiemum chlorotic mottle viroid: a loop-loop interaction motif conserved in most natural hammerheads. Nucleic Acids Res. 37(2):368-378
    • (2008) Nucleic Acids Res. , vol.37 , Issue.2 , pp. 368-378
    • Dufour, D.1    De La Peña, M.2    Gago, S.3    Flores, R.4    Gallego, J.5
  • 32
    • 34347405515 scopus 로고    scopus 로고
    • Existence in vivo of the loop e motif in potato spindle tuber viroid RNA
    • DOI 10.1007/s00705-007-0952-y
    • Eiras M, Kitajima EW, Flores R, Daròs JA. 2007. Existence in vivo of the loop E motif in potato spindle tuber viroid RNA. Arch. Virol. 152:1389-1399 (Pubitemid 47024691)
    • (2007) Archives of Virology , vol.152 , Issue.7 , pp. 1389-1393
    • Eiras, M.1    Kitajima, E.W.2    Flores, R.3    Daros, J.A.4
  • 33
    • 1242339595 scopus 로고    scopus 로고
    • The RITS Complex - A Direct Link between Small RNA and Heterochromatin
    • DOI 10.1016/S1097-2765(04)00057-7
    • Ekwall K. 2004. The RITS complex-A direct link between, small RNA and heterochromatin. Mol. Cell 13:304- (Pubitemid 38229803)
    • (2004) Molecular Cell , vol.13 , Issue.3 , pp. 304-305
    • Ekwall, K.1
  • 34
    • 0023652361 scopus 로고
    • Self-cleaving transcripts of satellite DNA from, the newt
    • Epstein LM, Gall JG. 1987 Self-cleaving transcripts of satellite DNA from, the newt. Cell 48:535-544
    • (1987) Cell , vol.48 , pp. 535-544
    • Epstein, L.M.1    Gall, J.G.2
  • 35
    • 0035890477 scopus 로고    scopus 로고
    • Transcription of potato spindle tuber viroid by RNA polymerase II starts predominantly at two specific sites
    • Feis A, Hu K, Riesner D. 2001. Transcription of potato spindle tuber viroid by RNA polymerase II starts predominantly at two specific sites. Nucleic Ada Res. 29:4589-4599 (Pubitemid 33095019)
    • (2001) Nucleic Acids Research , vol.29 , Issue.22 , pp. 4589-4597
    • Fels, A.1    Hu, K.2    Riesner, D.3
  • 36
    • 0031806709 scopus 로고    scopus 로고
    • Schistosome satellite DNA encodes active hammerhead ribozymes
    • Ferbeyre G, Smith JM, Cedergren R. 1998. Schistosome satellite DNA encodes active hammerhead ribozymes. Mol. Cell Biol. 18:3880-3888 (Pubitemid 28287911)
    • (1998) Molecular and Cellular Biology , vol.18 , Issue.7 , pp. 3880-3888
    • Ferbeyre, G.1    Smith, J.M.2    Cedergren, R.3
  • 37
    • 0034575895 scopus 로고    scopus 로고
    • Avsunviroidae family: Viroids containing hammerhead ribozymes
    • Flores R, Daròs JA, Hernandez C. 2000 Avsunviroidae family: viroids containing hammerhead ribozymes. Adv. VrmRes. 55:271-332
    • (2000) Adv. VrmRes. , vol.55 , pp. 271-332
    • Flores, R.1    Daròs, J.A.2    Hernandez, C.3
  • 38
    • 2542457425 scopus 로고    scopus 로고
    • Viroids: The minimal non-coding RNAs with autonomous replication
    • DOI 10.1016/j.febslet.2004.03.118, PII S0014579304004934
    • Flores R, Delgado S, Gas ME, Carbonell A, Molina D, et al. 2004. Viroids: the minimal noncoding RNAs with, autonomous replication. FEBS Let. 567:42-44 (Pubitemid 38686421)
    • (2004) FEBS Letters , vol.567 , Issue.1 , pp. 42-48
    • Flores, R.1    Delgado, S.2    Gas, M.-E.3    Carbonell, A.4    Molina, D.5    Gago, S.6
  • 40
    • 0023663396 scopus 로고
    • Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites
    • Forster AC, Symons RH. 1987 Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites. Cell 49:211.-212
    • (1987) Cell , vol.49 , pp. 211-212
    • Forster, A.C.1    Symons, R.H.2
  • 41
    • 22244451704 scopus 로고    scopus 로고
    • A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability
    • DOI 10.1261/rna.2230605
    • Gago S, de la Peña M, Flores R. 2005. A kissing-loop interaction in a hammerhead viroid RNA critical forks in vitro folding and in vivo viability. RNA 11:1073-1078 (Pubitemid 40994188)
    • (2005) RNA , vol.11 , Issue.7 , pp. 1073-1083
    • Gago, S.1    De La Peña, M.2    Flores, R.3
  • 42
    • 62149152282 scopus 로고    scopus 로고
    • Extremely high mutation rate of a hammerhead viroid
    • Gago S, Elena SF, Flores R, Sanjuán R. 2009 Extremely high mutation rate of a hammerhead viroid. Science 323:130
    • (2009) Science , vol.323 , pp. 130
    • Gago, S.1    Elena, S.F.2    Flores, R.3    Sanjuán, R.4
  • 43
    • 38749143752 scopus 로고    scopus 로고
    • Processing of nuclear viroids in vivo: An interplay between RNA conformations
    • Gas ME, Hernández C, Flores R, Daròs JA. 2007 Processing of nuclear viroids in vivo: an interplay between RNA conformations. PLoS Pathog. 3:e18
    • (2007) PLoS Pathog. , vol.3
    • Gas, M.E.1    Hernández, C.2    Flores, R.3    Daròs, J.A.4
  • 44
    • 53749103257 scopus 로고    scopus 로고
    • Monomerie linear RNA of citrus exoeortis viroid resulting from processing in vivo has 5'-phosphomonoester and 3'-hydroxyi termini: Implications for die RNase and. RNA ligase involved in replication
    • Gas ME, Molina-Serrano D, Hernández C, Flores R, Daròs JA. 2008 Monomerie linear RNA of citrus exoeortis viroid resulting from processing in vivo has 5'-phosphomonoester and 3'-hydroxyi termini: implications for die RNase and. RNA ligase involved in replication. J. Virol. 82:10, 321-322
    • (2008) J. Virol. , vol.82 , Issue.10 , pp. 321-322
    • Gas, M.E.1    Molina-Serrano, D.2    Hernández, C.3    Flores, R.4    Daròs, J.A.5
  • 45
    • 0032698450 scopus 로고    scopus 로고
    • Translocation of structural P proteins in die phloem
    • Goiecki B, Schulz A, Thompson GA. 1999 Translocation of structural P proteins in die phloem. Plant Cell 11:127-134
    • (1999) Plant Cell , vol.11 , pp. 127-134
    • Goiecki, B.1    Schulz, A.2    Thompson, G.A.3
  • 46
    • 55549113227 scopus 로고    scopus 로고
    • Viroid-induced symptoms in Nicotiana benthamiana plants are dependent on RDR6 activity
    • DOI 10.1104/pp.108.120808
    • Gómez G, Martinez G, Pallas V. 2008. Viroid-induced symptoms in Nicotiana benthamiana plants are dependent on RDR6 activity. Plant Physiol. 148:414-422 (Pubitemid 352847616)
    • (2008) Plant Physiology , vol.148 , Issue.1 , pp. 414-423
    • Gomez, G.1    Martinez, G.2    Pallas, V.3
  • 47
    • 0034984635 scopus 로고    scopus 로고
    • Identification of an in vitro ribonucleoprotein complex between a viroid RNA and a phloem protein from cucumber plants
    • Gómez G, Pallas V. 2001. Identification of an in vitro ribonucleoprotein complex between a viroid RNA and a phloem protein from cucumber plants. Mol. Plant-Microbe Interact. 14:910-911 (Pubitemid 32575669)
    • (2001) Molecular Plant-Microbe Interactions , vol.14 , Issue.7 , pp. 910-913
    • Gomez, G.1    Pallas, V.2
  • 48
    • 4444250154 scopus 로고    scopus 로고
    • A long-distance translocatable phloem protein from cucumber forms a ribonucleoprotein complex in vivo with Hop stunt viroid RNA
    • DOI 10.1128/JVI.78.18.10104-10110.2004
    • Gómez G, Pallas V. 2004. A long-distance transiocatabie phloem protein from cucumber forms a ribonucleoprotein complex in vivo with hop stunt viroid RNA. J. Virol. 78:10104-10111 (Pubitemid 39187128)
    • (2004) Journal of Virology , vol.78 , Issue.18 , pp. 10104-10110
    • Gomez, G.1    Pallas, V.2
  • 49
    • 34548494147 scopus 로고    scopus 로고
    • Mature monomeric forms of Hop stunt viroid resist RNA silencing in transgenic plants
    • DOI 10.1111/j.1365-313X.2007.03203.x
    • Gómez G, Pallas V. 2007. Mature monomelic forms of hop stunt viroid resist RNA silencing in transgenic plants. Plant J. 51:1041-1044 (Pubitemid 47373572)
    • (2007) Plant Journal , vol.51 , Issue.6 , pp. 1041-1049
    • Gomez, G.1    Pallas, V.2
  • 50
    • 12744268487 scopus 로고    scopus 로고
    • Identification of transiocatabie RNA-binding phloem proteins from melon, potential components of the long-distance RNA transport system
    • Gómez G, Torres H, Pallas V. 2005 Identification of transiocatabie RNA-binding phloem proteins from melon, potential components of the long-distance RNA transport system. Plant J. 41:107-111
    • (2005) Plant J. , vol.41 , pp. 107-111
    • Gómez, G.1    Torres, H.2    Pallas, V.3
  • 51
    • 34250673097 scopus 로고    scopus 로고
    • Replication-independent long-distance trafficking by viral RNAs in Nicotiana benthamiana
    • GopinathK, Kao CC. 2007 Replication-independent long-distance trafficking by viral RNAs in Nicotiana benthamiana. Plant Cell 19:1179-1189
    • (2007) Plant Cell , vol.19 , pp. 1179-1189
    • Gopinathk Kao, C.C.1
  • 52
    • 4644307202 scopus 로고    scopus 로고
    • Viroids: Unusual small pathogenic RNAs
    • Góra-Sochacka A. 2004. Viroids: unusual small pathogenic RNAs. Acta, Biochim. Pol, 51:587-660 (Pubitemid 39296915)
    • (2004) Acta Biochimica Polonica , vol.51 , Issue.3 , pp. 587-607
    • Gora-Sochacka, A.1
  • 53
    • 0141905899 scopus 로고    scopus 로고
    • Characterization of the RNA motif responsible for the specific interaction of potato spindle tuber viroid RNA (PSTVd) and the tomato protein Virp1
    • DOI 10.1093/nar/gkg777
    • Gozmanova M, Denti MA, Minkov IN, Tsagris M, Tabler M. 2003. Characterization of the RNA motif responsible for the specific interaction of potato spindle tuber viroid RNA (PSTVd) and the tomato protein Virpl. Nucleic Acids Res. 31:5534-5544 (Pubitemid 37441923)
    • (2003) Nucleic Acids Research , vol.31 , Issue.19 , pp. 5534-5543
    • Gozmanova, M.1    Denti, M.A.2    Minkov, I.N.3    Tsagris, M.4    Tabler, M.5
  • 54
    • 0142123125 scopus 로고    scopus 로고
    • The L box regulan: Lysine sensing by leader RNAs of bacterial lysine biosynthesis genes
    • Grundy FJ, Lehman SC, Henkin TM. 2003 The L box regulan: lysine sensing by leader RNAs of bacterial lysine biosynthesis genes. Ptvc. Natl. Acad. Sci. USA 1.00:1.2057-2076
    • (2003) Ptvc. Natl. Acad. Sci. USA , vol.100 , pp. 12057-2076
    • Grundy, F.J.1    Lehman, S.C.2    Henkin, T.M.3
  • 55
    • 84908313998 scopus 로고    scopus 로고
    • Viroids: New and continuing risks for horticultural and agricultural crops
    • Hammond RW, Owens RA. 2006 Viroids: new and continuing risks for horticultural and agricultural crops. APSnet. http://www.apsnet.org/online/ feature/viroids
    • (2006) APSnet.
    • Hammond, R.W.1    Owens, R.A.2
  • 56
    • 0033838230 scopus 로고    scopus 로고
    • Characterization of a tomato protein kinase gene induced by infection by Potato spindle tuber viroid
    • Hammond RW, Zhao Y. 2000. Characterization of a tomato protein kinase gene induced by infection by potato spindle tuber viroid. Mol. Plant-Microbe Interact. 13:903-911 (Pubitemid 30648038)
    • (2000) Molecular Plant-Microbe Interactions , vol.13 , Issue.9 , pp. 903-910
    • Hammond, R.W.1    Zhao, Y.2
  • 57
    • 17044403824 scopus 로고    scopus 로고
    • Phloem long-distance trafficking of gibberellic acid-insensitive rna regulates leaf development
    • DOI 10.1111/j.1365-313X.2005.02351.x
    • Haywood V, Yu TS, Huang NC, Lucas WJ. 2005. Phloem long-distance trafficking of GIBBERELLIC ACID-INSENSITIVE RNA regulates leaf development. Plant J. 42:49-56 (Pubitemid 40492558)
    • (2005) Plant Journal , vol.42 , Issue.1 , pp. 49-68
    • Haywood, V.1    Yu, T.-S.2    Huang, N.-C.3    Lucas, W.J.4
  • 58
    • 0018788109 scopus 로고
    • Fine structure melting of viroids as studied lay kinetic methods
    • Heneo K, Sanger HL, Riesner D. 1979 Fine structure melting of viroids as studied lay kinetic methods. Nucleic Acids Res. 6:3041-3045
    • (1979) Nucleic Acids Res. , vol.6 , pp. 3041-3045
    • Heneo, K.1    Sanger, H.L.2    Riesner, D.3
  • 59
    • 0023047510 scopus 로고
    • Self-cleavage of plus and minus RNA transcripts of avocado sunbiotch viroid
    • Hutchins CJ, RathjenJP, Forster AC, Symons RH. 1986 Self-cleavage of plus and minus RNA transcripts of avocado sunbiotch viroid. Nucleic Adds Res. 14:3627-3634
    • (1986) Nucleic Adds Res. , vol.14 , pp. 3627-3634
    • Hutchins, C.J.1    Rathjen, J.P.2    Forster, A.C.3    Symons, R.H.4
  • 61
    • 0036800818 scopus 로고    scopus 로고
    • Potato spindle tuber viroid strains of different pathogenicity induces and suppresses expression of common and unique genes in infected tomato
    • Itaya A, Matsuda Y, Gonzales RA, Nelson RS, Ding B. 2002. Potato spindle tuber viroid strains of different pathogenicity induces and suppresses expression of common and unique genes in infected tomato. Mol, Plant-Microbe Interact. 15:990-999 (Pubitemid 35211752)
    • (2002) Molecular Plant-Microbe Interactions , vol.15 , Issue.10 , pp. 990-999
    • Itaya, A.1    Matsuda, Y.2    Gonzales, R.A.3    Nelson, R.S.4    Ding, B.5
  • 62
    • 33947372982 scopus 로고    scopus 로고
    • A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation
    • DOI 10.1128/JVI.02339-06
    • Itaya A, Zhong X, Bundschuh R, Qi Y, Wang Y, et al. 2007. A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNAinduced silencing complex-mediated degradation. J. Virol. 81:2980-2989 (Pubitemid 46447061)
    • (2007) Journal of Virology , vol.81 , Issue.6 , pp. 2980-2994
    • Itaya, A.1    Zhong, X.2    Bundschuh, R.3    Qi, Y.4    Wang, Y.5    Takeda, R.6    Harris, A.R.7    Molina, C.8    Nelson, R.S.9    Ding, B.10
  • 63
    • 0028230578 scopus 로고
    • Complexes of yeast RNA polymerase II and RNA are substrates for TFIIS-induced RNA cleavage
    • Johnson. TL, Chamberlin MJ. 1994 Complexes of yeast RNA polymerase II and RNA are substrates for TFIIS-induced RNA cleavage. Cell 77:21.7-2
    • (1994) Cell , vol.77 , pp. 217-2
    • Johnson, T.L.1    Chamberlin, M.J.2
  • 65
    • 36349017830 scopus 로고    scopus 로고
    • Virp1 is a host protein with a major role in potato spindle tuber viroid infection in Nicotiana plants
    • DOI 10.1128/JVI.00974-07
    • Kalantidis K, Denti MA, Tzortzakaki S, Marinou E, Tabler M, Tsagris M. 2007. Virpl is a host protein with, a major role in potato spindle tuber viroid infection in Nicotiana plants. J. Virol. 81:12872-12878 (Pubitemid 350156924)
    • (2007) Journal of Virology , vol.81 , Issue.23 , pp. 12872-12880
    • Kalantidis, K.1    Denti, M.A.2    Tzortzakaki, S.3    Marinou, E.4    Tabler, M.5    Tsagris, M.6
  • 67
    • 0043009734 scopus 로고    scopus 로고
    • Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity
    • DOI 10.1038/nsb959
    • Khvorova A, Lescoute A, Westhof E, Jayasena SD. 2003. Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity. Nat. Struct. Biol. 10:708-711 (Pubitemid 37052408)
    • (2003) Nature Structural Biology , vol.10 , Issue.9 , pp. 708-712
    • Khvorova, A.1    Lescoute, A.2    Westhof, E.3    Jayasena, S.D.4
  • 69
    • 33744816589 scopus 로고    scopus 로고
    • Transcription of potato spindle tuber viroid by RNA polymerase II starts in the left terminal loop
    • DOI 10.1016/j.virol.2005.11.039, PII S0042682205007890
    • Kolonko N, Bannach O, Aschermann K, Hu KH, Moors M, et al. 2006. Transcription of potato spindle tuber viroid by RNA polymerase II starts in the left terminal loop. Virology 347:392-440 (Pubitemid 44316554)
    • (2006) Virology , vol.347 , Issue.2 , pp. 392-404
    • Kolonko, N.1    Bannach, O.2    Aschermann, K.3    Hu, K.-H.4    Moors, M.5    Schmitz, M.6    Steger, G.7    Riesner, D.8
  • 70
    • 0028810906 scopus 로고
    • Intra- And intermolecular nonenzymatic ligations occur within transcripts derived from the peach latent mosaic viroid
    • Lafontaine D, Beaudry D, Marquis P, Perreault JP. 1995 Intra- and intermolecular nonenzymatic ligations occur within transcripts derived from the peach latent mosaic viroid. Virology 212:705-
    • (1995) Virology , vol.212 , pp. 705
    • Lafontaine, D.1    Beaudry, D.2    Marquis, P.3    Perreault, J.P.4
  • 71
    • 20744457353 scopus 로고    scopus 로고
    • RNA replication without RNA-dependent RNA polymerase: Surprises from hepatitis delta virus
    • Lai MM. 2005 RNA replication without RNA-dependent RNA polymerase: surprises from hepatitis delta virus. J. Virol, 79:7951-7955
    • (2005) J. Virol , vol.79 , pp. 7951-7955
    • Lai, M.M.1
  • 72
    • 36249026527 scopus 로고    scopus 로고
    • Molecular basis of RNA-dependent RNA polymerase II activity
    • DOI 10.1038/nature06290, PII NATURE06290
    • Lehmann E, Brueckner F, Cramer P. 2007. Molecular basis of RNA-dependent RNA polymerase II activity. Nature 450:445-454 (Pubitemid 350126752)
    • (2007) Nature , vol.450 , pp. 445-449
    • Lehmann, E.1    Brueckner, F.2    Cramer, P.3
  • 73
    • 33744807172 scopus 로고    scopus 로고
    • The building blocks and motifs of RNA architecture
    • DOI 10.1016/j.sbi.2006.05.009, PII S0959440X06000807
    • Leontis NB, Lescoute A, Westhof E. 2006. The building blocks and motifs of RNA architecture. Curr. Opin. Struct. Biol. 16:279-288 (Pubitemid 43831653)
    • (2006) Current Opinion in Structural Biology , vol.16 , Issue.3 , pp. 279-287
    • Leontis, N.B.1    Lescoute, A.2    Westhof, E.3
  • 74
    • 0031664960 scopus 로고    scopus 로고
    • The 5S rRNA loop E: Chemical probing and phylogenetic data versus crystal structure
    • DOI 10.1017/S1355838298980566
    • Leontis NB, Westhof E. 1998. The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure. RNA 4:1134-1135 (Pubitemid 28413459)
    • (1998) RNA , vol.4 , Issue.9 , pp. 1134-1153
    • Leontis, N.B.1    Westhof, E.2
  • 75
    • 0025981740 scopus 로고
    • Formation of a thermodynamically metastable structure containing hairpin II is critical for infectivity of potato spindle tuber viroid RNA
    • Loss P, Schmitz M, Steger G, Riesner D. 1991. Formation of a thermodynamically metastable structure containing hairpin II is critical for infectivity of potato spindle tuber viroid RNA. EMBOJ. 10:719-722 (Pubitemid 21905528)
    • (1991) EMBO Journal , vol.10 , Issue.3 , pp. 719-727
    • Loss, P.1    Schmitz, M.2    Steger, G.3    Riesner, D.4
  • 76
    • 33746300537 scopus 로고    scopus 로고
    • Functional analysis of the 5' untranslated region of potexvirus RNA reveals a role in viral replication and cell-to-cell movement
    • Lough Tj, Lee RH, Emerson Sj, Forster RL, Lucas WJ. 2006 Functional analysis of the 5' untranslated region of potexvirus RNA reveals a role in viral replication and cell-to-cell movement. Virology 351:455-456
    • (2006) Virology , vol.351 , pp. 455-456
    • Lough, T.J.1    Lee, R.H.2    Emerson, S.J.3    Forster, R.L.4    Lucas, W.J.5
  • 77
    • 33745954371 scopus 로고    scopus 로고
    • Integrative plant biology: Role of phloem long-distance macromolecular trafficking
    • Lough Tj, Lucas Wj. 2006 Integrative plant biology: role of phloem long-distance macromolecular trafficking. Annu. Rev. Plant Biol. 57:203-213
    • (2006) Annu. Rev. Plant Biol. , vol.57 , pp. 203-213
    • Lough, T.J.1    Lucas, W.J.2
  • 78
    • 36749002070 scopus 로고    scopus 로고
    • Successive accumulation of two size classes of viroid-specific small RNA in potato spindle tuber viroid-infected tomato plants
    • DOI 10.1099/vir.0.83228-0
    • Machida S, Yamahata N, Watanuki H, Owens RA, Sano T. 2007. Successive accumulation of two size classes of viroid-specific small RNA in potato spindle tuber viroid-infected tomato plants. J. Gen. Virol. 88:3452-3455 (Pubitemid 350201857)
    • (2007) Journal of General Virology , vol.88 , Issue.12 , pp. 3452-3457
    • Machida, S.1    Yamahata, N.2    Watanuki, H.3    Owens, R.A.4    Sano, T.5
  • 80
    • 0042887667 scopus 로고    scopus 로고
    • Peach latent mosaic viroid variants inducing peach calico (extreme chlorosis) contain a characteristic insertion that is responsible for this symptomatology
    • DOI 10.1016/S0042-6822(03)00315-5
    • Malfitano M, Di Serio F, Covelli L, Ragozzino A, Hernandez C, Flores R. 2003. Peach latent mosaic viroid variants inducing peach calico (extreme chlorosis) contain a characteristic insertion that is responsible for this symptomatology. Vrology 313:492-550 (Pubitemid 37040689)
    • (2003) Virology , vol.313 , Issue.2 , pp. 492-501
    • Malfitano, M.1    Di Serio, F.2    Covelli, L.3    Ragozzino, A.4    Hernandez, C.5    Flores, R.6
  • 81
    • 0037371444 scopus 로고    scopus 로고
    • Viroid RNA systemic spread may depend on the interaction of a 71-nucleotide bulged hairpin with the host protein VirP1
    • DOI 10.1261/rna.2162203
    • Maniataki E, Martínez de Alba AE, Cesser RS, Tabler M, Tsagris M. 2003. Viroid RNA systemic spread may depend on. the interaction of a 71-nucleotide bulged hairpin with the host protein VirP1. RNA 9:346-355 (Pubitemid 36246173)
    • (2003) RNA , vol.9 , Issue.3 , pp. 346-354
    • Maniataki, E.1    Tabler, M.2    Tsagris, M.3
  • 82
    • 1042302387 scopus 로고    scopus 로고
    • RNAsilencing as related to viroidinduced symptom expression
    • MarkarianN, Li HW, Ding SW, Semancik JS. 2004 RNAsilencing as related to viroidinduced symptom expression. Arch. Virol. 149:39740
    • (2004) Arch. Virol. , vol.149 , pp. 39740
    • Markariann Li, H.W.1    Ding, S.W.2    Semancik, J.S.3
  • 83
    • 34548740745 scopus 로고    scopus 로고
    • Characterization of small RNAs derived from Citrus exocortis viroid (CEVd) in infected tomato plants
    • DOI 10.1016/j.virol.2007.05.011, PII S0042682207003510
    • Martin R, Arenas C, Daròs JA, Covarrubias A, Reyes JL, Chua NIL 2007. Characterization of small RNAs derived from Citrus exocortis viroid (CEVd) in infected tomato plants. Virology 367:1354 (Pubitemid 47432786)
    • (2007) Virology , vol.367 , Issue.1 , pp. 135-146
    • Martin, R.1    Arenas, C.2    Daros, J.-A.3    Covarrubias, A.4    Reyes, J.L.5    Chua, N.-H.6
  • 84
    • 0344564211 scopus 로고    scopus 로고
    • Molecular characterization and genome organization of 7SL RNA genes from hop (Humulm lupulus L)
    • Matoušek J, junker V, Vrba L, Schubert J, Patzak J, Steger G. 1999 Molecular characterization and genome organization of 7SL RNA genes from hop (Humulm lupulus L). Gene 239:173-178
    • (1999) Gene , vol.239 , pp. 173-178
    • Matoušek, J.1    Junker, V.2    Vrba, L.3    Schubert, J.4    Patzak, J.5    Steger, G.6
  • 86
    • 35448962097 scopus 로고    scopus 로고
    • Experimental transmission of Pospiviroid populations to weed species characteristic of potato and hop fields
    • DOI 10.1128/JVI.01165-07
    • MatoušekJ, Orctova L, Ptacekj, PatzakJ, Dědic P, et al. 2007. Experimental transmission of pospiviroid populations to weed species characteristic of potato and hop fields. J. Virol. 81:11, 891-899 (Pubitemid 47628681)
    • (2007) Journal of Virology , vol.81 , Issue.21 , pp. 11891-11899
    • Matousek, J.1    Orctova, L.2    Ptacek, J.3    Patzak, J.4    Dedic, P.5    Steger, G.6    Riesner, D.7
  • 87
    • 49149104481 scopus 로고    scopus 로고
    • Elimination of hop latent viroid upon developmental activation of pollen nucleases
    • Matoušek J, Orctova L, Škopek J, Pesina K, Steger G. 2008 Elimination of hop latent viroid upon developmental activation of pollen nucleases. Biol. Chem. 389:905-911
    • (2008) Biol. Chem. , vol.389 , pp. 905-911
    • Matoušek, J.1    Orctova, L.2    Škopek, J.3    Pesina, K.4    Steger, G.5
  • 88
    • 0034042138 scopus 로고    scopus 로고
    • A low transmissibility of hop latent viroid through a generative phase of Humulu lupultis L
    • Matoušek J, Patzak J. 2000 A low transmissibility of hop latent viroid through a generative phase of Humulu lupultis L. Biol, Plant 43:1454
    • (2000) Biol, Plant , vol.43 , pp. 1454
    • Matoušek, J.1    Patzak, J.2
  • 89
    • 0029426839 scopus 로고    scopus 로고
    • 1.995. the gradual reduction of viroid levels in hop menciones following heat therapy: A possible role for a nuclease degrading dsRNA
    • Matoušek J, Trnena L, Svoboda P, Oriniakova P, Lichtenstein CP 1.995. The gradual reduction of viroid levels in hop menciones following heat therapy: a possible role for a nuclease degrading dsRNA. Biol. Chem. Hoppe Seyler 376:7.15-21
    • Biol. Chem. Hoppe Seyler , vol.376 , Issue.7 , pp. 15-21
    • Matoušek, J.1    Trnena, L.2    Svoboda, P.3    Oriniakova, P.4    Lichtenstein, C.P.5
  • 90
  • 91
    • 0027331132 scopus 로고
    • Pollen and seed-transmitted viruses and viroids
    • Mink GI. 1993 Pollen and seed-transmitted viruses and viroids. Annu. Rev. Phytopathol. 31:37540
    • (1993) Annu. Rev. Phytopathol. , vol.31 , pp. 37540
    • Mink, G.I.1
  • 92
    • 34247102793 scopus 로고    scopus 로고
    • Processing of RNAs of the family Avsunviroidae in Chlamydomonas reinhardtii chloroplasts
    • DOI 10.1128/JVI.02556-06
    • Molina-Serrano D, Suay L, Salvador ML, Flores R, Daros JA. 2007. Processing of RNAs of the family Avsunviroidae in Chlamydomonas reinhardtii chloroplasts. J. Virol. 81:4363-4366 (Pubitemid 46586932)
    • (2007) Journal of Virology , vol.81 , Issue.8 , pp. 4363-4366
    • Molina-Serrano, D.1    Suay, L.2    Salvador, M.L.3    Flores, R.4    Daros, J.-A.5
  • 93
    • 40849083885 scopus 로고    scopus 로고
    • The peach latent mosaic viroid replication initiation site is located at a universal position, that appears to be defined by a conserved sequence
    • Motard J, Bolduc F, Thompson D, Perreault JP. 2008 The peach latent mosaic viroid replication initiation site is located at a universal position, that appears to be defined by a conserved sequence. Virology 373:362-367
    • (2008) Virology , vol.373 , pp. 362-367
    • Motard, J.1    Bolduc, F.2    Thompson, D.3    Perreault, J.P.4
  • 94
    • 0034214286 scopus 로고    scopus 로고
    • Characterization of the initiation sites of both polarity strands of a viroid RNA reveals a motif conserved in sequence and structure
    • Navarro JA, Flores R. 2000. Characterization of the initiation sites of both polarity strands of a viroid RNA reveals a motif conserved in sequence and structure. EMBOJ. 19:2662-2667 (Pubitemid 30323554)
    • (2000) EMBO Journal , vol.19 , Issue.11 , pp. 2662-2670
    • Navarro, J.-A.1    Flores, R.2
  • 95
    • 0034058302 scopus 로고    scopus 로고
    • A chloroplastic RNA polymerase resistant to tagetitoxin is involved in replication of Avocado sunblotch viroid
    • DOI 10.1006/viro.1999.0161
    • Navarro JA, Vera A, Flores R. 2000. A chloroplastic RNA polymerase resistant to tagetitoxin is involved in replication of avocado sunblotch viroid. Virology 268:218-222 (Pubitemid 30131987)
    • (2000) Virology , vol.268 , Issue.1 , pp. 218-225
    • Navarro, J.-A.1    Vera, A.2    Flores, R.3
  • 96
    • 34249002274 scopus 로고    scopus 로고
    • Structural differences within the loop e motif imply alternative mechanisms of viroid processing
    • DOI 10.1261/rna.452307
    • Owens RA, Baumstark T. 2007. Structural differences within the loop E motif imply alternative mechanisms of viroid processing. RNA 13:824-833 (Pubitemid 46799816)
    • (2007) RNA , vol.13 , Issue.6 , pp. 824-834
    • Owens, R.A.1    Baumstark, T.2
  • 97
    • 0034989991 scopus 로고    scopus 로고
    • Possible involvement of the phloem lectin in long-distance viroid movement
    • Owens RA, Blackburn M, Ding B. 2001. Possible involvement of the phloem lectin in long-distance viroid movement. Mol. Plant-Microbe Interact. 14:905- (Pubitemid 32575668)
    • (2001) Molecular Plant-Microbe Interactions , vol.14 , Issue.7 , pp. 905-909
    • Owens, R.A.1    Blackburn, M.2    Ding, B.3
  • 98
    • 0026059364 scopus 로고
    • Effects of random mutagenesis upon potato spindle tuber viroid replication and symptom expression
    • Owens RA, Thompson SM, Steger G. 1991 Effects of random mutagenesis upon potato spindle tuber viroid replication and symptom expression. Virology 185:18-23
    • (1991) Virology , vol.185 , pp. 18-23
    • Owens, R.A.1    Thompson, S.M.2    Steger, G.3
  • 99
    • 0023223241 scopus 로고
    • Potato spindle tuber viroid: Investigation of the long-distance, intra-plant transport route
    • DOI 10.1016/0042-6822(87)90260-1
    • Palukaitis P. 1987. Potato spindle tuber viroid: investigation of the long-distance, intraplant transport route. Virology 158:2394 (Pubitemid 17073088)
    • (1987) Virology , vol.158 , Issue.1 , pp. 239-241
    • Palukaitis, P.1
  • 100
    • 0035368867 scopus 로고    scopus 로고
    • Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing
    • Papaefthimiou I, Hamilton A, Denti M, Baulcombe D, Tsagris M, Tabler M. 2001. Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post- transcriptional gene silencing. Nucleic Acids Res. 29:2395400 (Pubitemid 32514942)
    • (2001) Nucleic Acids Research , vol.29 , Issue.11 , pp. 2395-2400
    • Papaefthimiou, I.1    Hamilton, A.2    Denti, M.3    Baulcombe, D.4    Tsagris, M.5    Tabler, M.6
  • 101
    • 40449139010 scopus 로고    scopus 로고
    • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    • DOI 10.1038/nature06684, PII NATURE06684
    • Parisien M, Major F. 2008. The MC-FoId and MC-Sym pipeline infers RNA structure from sequence data. Nature 452:51-55 (Pubitemid 351355097)
    • (2008) Nature , vol.452 , Issue.7183 , pp. 51-55
    • Parisien, M.1    Major, F.2
  • 102
    • 4544287655 scopus 로고    scopus 로고
    • 1 targets single-stranded regions of nucleic acids independent of sequence or structural motifs
    • DOI 10.1074/jbc.M400105200
    • Park SW, Vepachedu R, Owens RA, Vivanco JM. 2004. The N-glycosidase activity of the ribosome- inactivating protein ME1 targets single-stranded regions of nucleic acids independent of sequence or structural motifs. J. Biol. Chem. 279:34165-34167 (Pubitemid 39318039)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.33 , pp. 34165-34174
    • Park, S.-W.1    Vepachedu, R.2    Owens, R.A.3    Vivanco, J.M.4
  • 103
    • 48249137036 scopus 로고    scopus 로고
    • Pond scum genomics: The genomes of Chlamydomonas and Ostreococcus
    • DOI 10.1105/tpc.107.056556
    • Peers G, Niyogi KK. 2008. Pond scum, genomics: the genomes of Chlamydomonas and Ostreococcus. Plant Cell 20:502- (Pubitemid 352843988)
    • (2008) Plant Cell , vol.20 , Issue.3 , pp. 502-507
    • Peers, G.1    Niyogi, K.K.2
  • 104
    • 0037150071 scopus 로고    scopus 로고
    • Characterization of a viroid-derived RNA promoter for the DNA-dependent RNA polymerase from Escherichia coli
    • DOI 10.1021/bi025595k
    • Pelchat M, Grenier C, Perreault JP. 2002. Characterization of a viroid-derived RNA promoter for the DNA-dependent RNA polymerase from Escherichia coli. Biochemistry 41:6561-6567 (Pubitemid 34526024)
    • (2002) Biochemistry , vol.41 , Issue.20 , pp. 6561-6571
    • Pelchat, M.1    Grenier, C.2    Perreault, J.-P.3
  • 106
    • 32644439149 scopus 로고    scopus 로고
    • Functional hammerhead ribozymes naturally encoded, in the genome of Arabidopsis thaliana
    • Przybilski R, Graf S, Lescoute A, Neilen W, Westhof E, et al. 2005 Functional hammerhead ribozymes naturally encoded, in the genome of Arabidopsis thaliana. Plant Cell 17:1877-1878
    • (2005) Plant Cell , vol.17 , pp. 1877-1878
    • Przybilski, R.1    Graf, S.2    Lescoute, A.3    Neilen, W.4    Westhof, E.5
  • 107
    • 0345376999 scopus 로고    scopus 로고
    • Differential Subnuclear Localization of RNA Strands of Opposite Polarity Derived from an Autonomously Replicating Viroid
    • DOI 10.1105/tpc.016576
    • Qi Y, Ding B. 2003. Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid. Plant Cell 15:2566-2567 (Pubitemid 37470658)
    • (2003) Plant Cell , vol.15 , Issue.11 , pp. 2566-2577
    • Qi, Y.1    Ding, B.2
  • 108
    • 0038457935 scopus 로고    scopus 로고
    • Inhibition of cell growth and shoot development by a specific nucleotide sequence in a noncoding viroid RNA
    • Qi Y, Ding B. 2003. Inhibition of ceil growth and shoot development by a specific nucleotide sequence in a noncoding viroid RNA. Plant Cell 15:13 60-67 (Pubitemid 36715178)
    • (2003) Plant Cell , vol.15 , Issue.6 , pp. 1360-1374
    • Qi, Y.1    Ding, B.2
  • 109
    • 20244379991 scopus 로고    scopus 로고
    • Direct role of a viroid RNA motif in mediating directional RNA trafficking accross a specific cellular boundary
    • DOI 10.1105/tpc.021980
    • Qi Y, Pelissier T, Itaya A, Hunt E, Wassenegger M, Ding B. 2004. Direct role of a viroid. RNA motif in mediating directional RNA trafficking across a specific cellular boundary. Plant Cell 16:1741-1745 (Pubitemid 38908773)
    • (2004) Plant Cell , vol.16 , Issue.7 , pp. 1741-1752
    • Qi, Y.1    Pelissier, T.2    Itaya, A.3    Hunt, E.4    Wassenegger, M.5    Ding, B.6
  • 110
    • 0027215283 scopus 로고
    • Multiple pathways of reversion in viroids for conservation of structural elements
    • Qu F, Heinrich C, Loss P, Steger G, Tien P, Riesner D. 1993. Multiple pathways of reversion in viroids for conservation of structural elements. EMBOJ. 12:2129-2133 (Pubitemid 23157728)
    • (1993) EMBO Journal , vol.12 , Issue.5 , pp. 2129-2139
    • Qu, F.1    Heinrich, C.2    Loss, P.3    Steger, G.4    Tien, P.5    Riesner, D.6
  • 112
    • 33645376746 scopus 로고    scopus 로고
    • The subviral RNA database: A toolbox for viroids, the hepatitis delta virus and satellite RNAs research
    • Rocheieau L, Peichat M. 2006 The subviral RNA database: a toolbox for viroids, the hepatitis delta virus and satellite RNAs research, BMC Microbiol, 6:2
    • (2006) BMC Microbiol , vol.6 , pp. 2
    • Rocheieau, L.1    Peichat, M.2
  • 114
    • 30344431506 scopus 로고    scopus 로고
    • Variants of Peach latent mosaic viroid inducing peach calico: Uneven distribution in infected plants and requirements of the insertion containing the pathogenecity determinant
    • DOI 10.1099/vir.0.81356-0
    • Rodio ME, Delgado S, Flores R, Di Serio F. 2006. Variants of peach latent mosaic viroid inducing peach calico: uneven distribution in infected plants and requirements of the insertion containing the pathogenicity determinant. J. Gen. Virol. 87:2314 (Pubitemid 43056962)
    • (2006) Journal of General Virology , vol.87 , Issue.1 , pp. 231-240
    • Rodio, M.-E.1    Delgado, S.2    Flores, R.3    Di Serio, F.4
  • 116
    • 34347327212 scopus 로고    scopus 로고
    • Selection for robustness in mutagenized RNA viruses
    • DOI 10.1371/journal.pgen.0030093
    • Sanjuan R, Cuevas JM, Furio V, Holmes EC, Moya A. 2007. Selection for robustness in mutagenized RNA viruses. PLoS Genet. 3:e9 (Pubitemid 47015854)
    • (2007) PLoS Genetics , vol.3 , Issue.6 , pp. 939-946
    • Sanjuan, R.1    Cuevas, J.M.2    Furio, V.3    Holmes, E.C.4    Moya, A.5
  • 118
    • 3042760984 scopus 로고    scopus 로고
    • Accumulation of short interfering RNAs characteristic of RNA silencing precedes recovery of tomato plants from severe symptoms of Potato spindle tuber viroid infection
    • DOI 10.1007/s10327-003-0083-6
    • Sano T, Matsuura Y. 2004. Accumulation of short interfering RNAs characteristic of RNA silencing precedes recovery of tomato plants from severe symptoms of potato spindle tuber viroid infection. J. Gen. Plant Pathol, 70:50-55 (Pubitemid 38871707)
    • (2004) Journal of General Plant Pathology , vol.70 , Issue.1 , pp. 50-53
    • Sano, T.1    Matsuura, Y.2
  • 119
    • 0035676435 scopus 로고    scopus 로고
    • Sequence diversity among avocado sunbiotch viroids isolated from single avocado trees
    • Schnell Rj, Kuhn DN, Olano CT, Quintanilla WE. 2001 Sequence diversity among avocado sunbiotch viroids isolated from single avocado trees. Phytoparasitica 29:451-456
    • (2001) Phytoparasitica , vol.29 , pp. 451-456
    • Schnell, R.J.1    Kuhn, D.N.2    Olano, C.T.3    Quintanilla, W.E.4
  • 120
    • 0001510299 scopus 로고
    • Correlation between structure and padiogenicity of potato spindle tuber viroid (PSTV)
    • Sclinölzer M, Haas B, Ramm K, Hofmann IT, Sänger ITL. 1985 Correlation between structure and padiogenicity of potato spindle tuber viroid (PSTV). EMBO J. 4:2181-2189
    • (1985) EMBO J. , vol.4 , pp. 2181-2189
    • Sclinölzer, M.1    Haas, B.2    Ramm, K.3    Hofmann, I.T.4    Sänger, I.T.L.5
  • 121
    • 0036682130 scopus 로고    scopus 로고
    • Detection and analysis of hairpin II, an essential metastable structural element in viroid replication intermediates
    • Schröder AR, Riesner D. 2002. Detection and analysis of hairpin II, an essential metastable structural element in viroid replication intermediates. Nucleic Adds Res. 30:3349-3355 (Pubitemid 34845931)
    • (2002) Nucleic Acids Research , vol.30 , Issue.15 , pp. 3349-3359
    • Schroder, A.R.W.1    Riesner, D.2
  • 122
    • 67449108522 scopus 로고    scopus 로고
    • RNAi-mediated resistance to potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct
    • Schwind. N, Zwiebel M, Itaya A, Ding B, Wang M-B, et al. 2009 RNAi-mediated resistance to potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct. Mol. Plant Pathol. In pres
    • (2009) Mol. Plant Pathol. in Pres
    • Schwind, N.1    Zwiebel, M.2    Itaya, A.3    Ding, B.4    Wang, M.-B.5
  • 123
    • 56049101131 scopus 로고    scopus 로고
    • A single nucleotide change in Hop stunt viroid modulates citrus cachexia symptoms
    • Serra P, Gago S, Duran-Vila N. 2008 A single nucleotide change in Hop stunt viroid modulates citrus cachexia symptoms. VtrmRes. 1.38:130-133
    • (2008) VtrmRes. , vol.138 , pp. 130-133
    • Serra, P.1    Gago, S.2    Duran-Vila, N.3
  • 124
    • 58149119365 scopus 로고    scopus 로고
    • Characterization of the siRNAs associated with peach latent mosaic viroid infection
    • St-Pierre P, Hassen IF, Thompson D, Perreault JP. 2008 Characterization of the siRNAs associated with peach latent mosaic viroid infection. Virology 383(2): 1.78-8
    • (2008) Virology , vol.383 , Issue.2 , pp. 178-8
    • St-Pierre, P.1    Hassen, I.F.2    Thompson, D.3    Perreault, J.P.4
  • 125
    • 0030774006 scopus 로고    scopus 로고
    • Transcription and translation in chloroplasts
    • Stern. DS, Higgs DC, Yang J. 1997 Transcription and translation in chloroplasts. Trends Plant Sci. 2:308-311
    • (1997) Trends Plant Sci. , vol.2 , pp. 308-311
    • Stern, D.S.1    Higgs, D.C.2    Yang, J.3
  • 126
    • 0242298623 scopus 로고    scopus 로고
    • An mRNA structure in bacteria that controls gene expression by binding lysine
    • DOI 10.1101/gad.1140003
    • Sudarsan N, Wickiser JK, Nakamura S, Ebert MS, Breaker RR. 2003. An mRNA structure in bacteria that controls gene expression by binding lysine. Genes Dev. 17:2688-2689 (Pubitemid 37363073)
    • (2003) Genes and Development , vol.17 , Issue.21 , pp. 2688-2697
    • Sudarsan, N.1    Wickiser, J.K.2    Nakamura, S.3    Ebert, M.S.4    Breaker, R.R.5
  • 127
    • 3042720856 scopus 로고    scopus 로고
    • Viroids: Petite RNA pathogens with distinguished talents
    • DOI 10.1016/j.tplants.2004.05.007, PII S1360138504001347
    • Tabler M, Tsagris M. 2004. Viroids: petite RNA pathogens with distinguished talents. Trends Plant Sci. 9:3394 (Pubitemid 38871433)
    • (2004) Trends in Plant Science , vol.9 , Issue.7 , pp. 339-348
    • Tabler, M.1    Tsagris, M.2
  • 129
    • 0022432038 scopus 로고
    • Eleven new sequence variants of citrus exocortis viroid and the correlation of sequence with padiogenicity
    • Visvader J, Symons RH. 1985 Eleven new sequence variants of citrus exocortis viroid and the correlation of sequence with padiogenicity. Nucleic Acids Res. 13:2907-2912
    • (1985) Nucleic Acids Res. , vol.13 , pp. 2907-2912
    • Visvader, J.1    Symons, R.H.2
  • 130
    • 0001506807 scopus 로고
    • Replication of in vitro constructed, viroid mutants: Location of the patliogenicity-moduiating domain of citrus exocortis viroid
    • Visvader JE, Symons RIT. 1986 Replication of in vitro constructed, viroid mutants: location of the patliogenicity-moduiating domain of citrus exocortis viroid. EMBOJ. 5:2051-2055
    • (1986) EMBOJ. , vol.5 , pp. 2051-2055
    • Visvader, J.E.1    Symons, R.I.T.2
  • 131
    • 1842587524 scopus 로고    scopus 로고
    • Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing
    • DOI 10.1111/j.1365-313X.2004.02029.x
    • Vogt U, Pelissier T, Putz A, Razvi F, Fischer R, Wássenegger M. 2004. Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing. Plant J. 38:107-111 (Pubitemid 38448448)
    • (2004) Plant Journal , vol.38 , Issue.1 , pp. 107-118
    • Vogt, U.1    Pelissier, T.2    Putz, A.3    Razvi, F.4    Fischer, R.5    Wassenegger, M.6
  • 132
    • 12144291576 scopus 로고    scopus 로고
    • On the role of RNA silencing in the padiogenicity and evolution of viroids and viral satellites
    • Wang MB, Bian XY, Wu LM, Liu LX, Smith NA, et al. 2004 On the role of RNA silencing in the padiogenicity and evolution of viroids and viral satellites. Proc. Natl. Acad. Sci. USA 101:3275-3278
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 3275-3278
    • Wang, M.B.1    Bian, X.Y.2    Wu, L.M.3    Liu, L.X.4    Smith, N.A.5
  • 133
    • 33846783260 scopus 로고    scopus 로고
    • Evidence for the existence of the loop e motif of Potato spindle tuber viroid in vivo
    • DOI 10.1128/JVI.01781-06
    • Wang Y, Zhong X, Itaya A, Ding B. 2007. Evidence for the existence of the loop E motif of potato spindle tuber viroid in vivo. J. Virol. 81:2074-2077 (Pubitemid 46214480)
    • (2007) Journal of Virology , vol.81 , Issue.4 , pp. 2074-2077
    • Wang, Y.1    Zhong, X.2    Itaya, A.3    Ding, B.4
  • 134
    • 0028031830 scopus 로고
    • RNA-directed de novo methylation of genomic sequences in plants
    • DOI 10.1016/0092-8674(94)90119-8
    • WasseneggerM, Heimes S, Riedel L, Sanger ITL. 1994. RNA-directed de novo methylation of genomic sequences in plants. Cell 76:567-576 (Pubitemid 24064176)
    • (1994) Cell , vol.76 , Issue.3 , pp. 567-576
    • Wassenegger, M.1    Heimes, S.2    Riedel, L.3    Sanger, H.L.4
  • 135
    • 0029109065 scopus 로고
    • A tomato cDNA encodes a protein homologous to the eukaryotíc ribosomal protein S25
    • Werner R, Guitton MC, Mühlbach HP. 1995 A tomato cDNA encodes a protein homologous to the eukaryotíc ribosomal protein S25. Plant Physiol. Biochem. 33:373-377
    • (1995) Plant Physiol. Biochem. , vol.33 , pp. 373-377
    • Werner, R.1    Guitton, M.C.2    Mühlbach, H.P.3
  • 136
    • 0035913336 scopus 로고    scopus 로고
    • Evolution of digital organisms at high mutation rates leads to survival of the flattest
    • DOI 10.1038/35085569
    • Wilke CO, Wang JL, Ofria C, Lenski RE, Adami C. 2001. Evolution of digital organisms at high mutation rates leads to survival of the flattest. Nature 412-331-3 (Pubitemid 32691846)
    • (2001) Nature , vol.412 , pp. 331-333
    • Wilke, C.O.1    Wang, J.L.2    Ofria, C.3    Lenski, R.E.4    Adami, C.5
  • 139
    • 0029941783 scopus 로고    scopus 로고
    • Cloning and characterization of extended hammerheads from a diverse set of caudate amphibians
    • DOI 10.1016/0378-1119(96)00126-6
    • Zhang Y, Epstein LM. 1996. Cloning and characterization of extended hammerheads from, a diverse set of caudate amphibians. Gene 172:183-189 (Pubitemid 26190051)
    • (1996) Gene , vol.172 , Issue.2 , pp. 183-190
    • Zhang, Y.1    Epstein, L.M.2
  • 140
    • 0034982093 scopus 로고    scopus 로고
    • Use of a vector based on Potato virus X in a whole plant assay to demonstrate nuclear targeting of potato spindle tuber viroid
    • Zhao Y, Owens RA, Hammond RW. 2001. Use of a vector based on potato virus X in a whole plant assay to demonstrate nuclear targeting of potato spindle tuber viroid. J. Gen, Virol. 82:1491-1499 (Pubitemid 32519781)
    • (2001) Journal of General Virology , vol.82 , Issue.6 , pp. 1491-1497
    • Zhao, Y.1    Owens, R.A.2    Hammond, R.W.3
  • 141
    • 43549096950 scopus 로고    scopus 로고
    • A genomic map of viroid RNA motifs critical for replication and systemic trafficking
    • DOI 10.1105/tpc.107.056606
    • Zhong X, Archual AI, Amin AA, Ding B. 2008. A genomic map of viroid RNA motifs critical for replication and systemic trafficking. Plant Cell 20:354 (Pubitemid 352844032)
    • (2008) Plant Cell , vol.20 , Issue.1 , pp. 35-47
    • Zhong, X.1    Archual, A.J.2    Amin, A.A.3    Ding, B.4
  • 142
    • 33748648811 scopus 로고    scopus 로고
    • Tertiary structural and functional analyses of Loop e motif in viroid RNA reveal its essential role in RNA.-templated RNA replication by the nuclear transcription machinery
    • Zhong X, Leontis NB, Qian S, Itaya A, Qi Y, et al, 2006 Tertiary structural and functional analyses of Loop E motif in viroid RNA reveal its essential role in RNA.-templated RNA replication by the nuclear transcription machinery. J. Virol. 80:8566-8568
    • (2006) J. Virol. , vol.80 , pp. 8566-8568
    • Zhong, X.1    Leontis, N.B.2    Qian, S.3    Itaya, A.4    Qi, Y.5
  • 143
    • 34548068007 scopus 로고    scopus 로고
    • Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking
    • DOI 10.1038/sj.emboj.7601812, PII 7601812
    • Zhong X, Tao X, Stombaugh J, Leontis N, Ding B. 2007. Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking. EMBOJ. 26:38364 (Pubitemid 47295879)
    • (2007) EMBO Journal , vol.26 , Issue.16 , pp. 3836-3846
    • Zhong, X.1    Tao, X.2    Stombaugh, J.3    Leontis, N.4    Ding, B.5
  • 144
    • 0035916011 scopus 로고    scopus 로고
    • Cellular basis of potato spindle tuber viroid systemic movement
    • DOI 10.1006/viro.2000.0724
    • Zhu Y, Green L, Woo Y-M, Owens R, Ding B. 2001. Cellular basis of potato spindle tuberviroid systemic movement. Virology 279:69-77 (Pubitemid 34161000)
    • (2001) Virology , vol.279 , Issue.1 , pp. 69-77
    • Zhu, Y.1    Green, L.2    Woo, Y.-M.3    Owens, R.4    Ding, B.5
  • 145
    • 0036740829 scopus 로고    scopus 로고
    • Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic
    • Zhu Y, Qi Y, Xun Y, Owens R, Ding B. 2002 Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic. Plant Physiol. 130:1384
    • (2002) Plant Physiol. , vol.130 , pp. 1384
    • Zhu, Y.1    Qi, Y.2    Xun, Y.3    Owens, R.4    Ding, B.5


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