Y-Chromosome distribution within the geo-linguistic landscape of northwestern Russia

European Journal of Human Genetics

Volumn 17, Issue 10, 2009, Pages 1260-1273

  Mirabal, Sheyla ^a   Regueiro, Maria ^a   Cadenas, Alicia M ^a   Cavalli Sforza, L Luca ^b   Underhill, Peter A ^b   Verbenko, Dmitry A ^c   Limborska, Svetlana A ^c   Herrera, Rene J ^a  

^a FLORIDA INTERNATIONAL UNIVERSITY   (United States)

^b STANFORD UNIVERSITY   (United States)

^c INSTITUTE OF MOLECULAR GENETICS   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; ETHNIC GROUP; GENE LOCUS; GENE MUTATION; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; HUMAN; LINGUISTICS; MALE; POPULATION GENETIC STRUCTURE; PRIORITY JOURNAL; RUSSIAN FEDERATION; SINGLE NUCLEOTIDE POLYMORPHISM; Y CHROMOSOME;

CHROMOSOMES, HUMAN, Y; ETHNIC GROUPS; GENETICS, POPULATION; GENOTYPE; GEOGRAPHY; HAPLOTYPES; HUMANS; LINGUISTICS; MUTATION; PHYLOGENY; POLYMORPHISM, GENETIC; POLYMORPHISM, SINGLE NUCLEOTIDE; RUSSIA; SIBERIA; TIME FACTORS;

EID: 70349611529     PISSN: 10184813     EISSN: 14765438     Source Type: Journal    
DOI: 10.1038/ejhg.2009.6     Document Type: Article

References (58)

1. Pavlov P, Roebroeks W, Svedsen JI: The Pleistocene colonization of northeastern Europe: A report on recent research. J Hum Evol 2004; 47: 3-17.
2. Otte M: The northwestern European Plain around 18 000 BP; In Soffer O, Gamble C (eds): The World at 18 000 BP. Unwin Hyman: London, 1990, Vol 1, pp 54-68.
3. Torroni A, Bandelt H, D'Urbano L et al: MtDNA analysis reveals a major late Paleolithic population expansion from southwestern to northeastern Europe. Am J Hum Genet 1998; 62: 1137-1152.
4. Lappalainen T, Koivumaki S, Salmela E, Huoponen K, Sistonen P, Savontaus ML, Lahermo P: Regional differenAes among the Finns: a Y-chromosomal perspective. Gene 2006; 376: 207-215.
5. Simchenko YuB: Early ethnogenesis of ethnic groups of the Ural language family from transpolar and circumpolar Eurasia; In Gurvich IS (ed): Ethnogenez narodov severa. Moscow: Nauka, 1980, pp 11-27.
6. Sajantila A, Lahermo P, Anttinen T et al: Genes and languages in Europe: An analysis of mitochondrial lineages. Genome Res 1995; 5: 42-52.
7. Malyarchuk BA: Differentiation of the mitochondrial subhaplogroup U4 in the populations of Eastern Europe, Ural, and Western Siberia: implication to the genetic history of the Uralic populations. Genetika 2004; 40: 1281-1287.
8. Verbenko DA, Knjazev AN, Mikulich AI, Khusnutdinova EK, Bebyakova NA, Limborska SA: Variability of the 3′APOB minisatellite locus in eastern Slavonic populations. Hum Hered 2005; 60: 10-18.
9. Verbenko DA, Slominsky PA, Spitsyn VA et al: Polymorphisms at locus D1S80 and other hypervariable regions in the analysis of Eastern European ethnic group relationships. Ann Hum Biol 2006; 33: 570-584.
10. Khrunin A, Verbenko D, Nikitina K, Limborska S: Regional differences in the genetic variability of Finno-Ugric speaking Komi populations. Am J Hum Bio 2007; 19: 741-750.
11. Khrunin AV, Tarskaia LA, Spitsyn VA, Lylova OI, Bebyakova NA, Mikulich AI, Limborska SA: P53 polymorphismsCin Russia and Belarus: correlation of the 2-1-1 haplotype frequency with longitude. Mol Genet Genomics 2005; 272: 666-672.
12. Wells RS, Yuldasheva N, Ruzibakiev R et al: The Eurasian heartland: A continental perspective on Y-chromosomal diversity. Proc Natl Acad USA 2001; 98: 10244-10249.
13. Semino O, Passarino G, Oefner PJ et al: The genetic legacy of Paleolithic Homo sapiens sapiens in extant Europeans: A Y chromosome perspective. Science 2000; 290: 1155-1159.
14. Zerjal T, Dashnyam B, Pandya A et al: Genetic relationships of Asians and Northern Europeans, revealed by Y-chromosomal DNA analysis. Am J Hum Genet 1997; 60: 1174-1183.
15. Rootsi S, Zhivotovsky LA, Baldovic M et al: A counter-clockwise northern route of the Y-chromosome haplogroup N from Southeast Asia towards Europe. Eur J Hum Genet 2007; 15: 211-405.
16. Xue Y, Zerjal T, Ban W et al: Male demography in East Asia: a north-south contrast in human population expansion times. Genetics 2006; 172: 2431-2439.
17. Guglielmino CR, Piazza A, Menozzi P, Cavalli-Sforza LL: Uralic genes in Europe. Am J Phys Anthropol 1990; 83: 57-68.
18. Sengupta S, Zhivotovsky LA, King R et al: Polarity and temporality of high-resolution Y-chromosome distributions in India identify both indigenous and exogenous expansions and reveals minor genetic influence of Central Asian pastoralists. Am J Hum Genet 2006; 78: 202-221.
19. Niitemaa V, Hovi K: Baltian Historia (Jyväskylä). Helsinki, Finland, 1991, pp 272-276.
20. Harvey RG, Tills D, Warlow A et al: Genetic affinities of the Balts. A study of blood groups, serum proteins and enzymes of Lithuanians in the United Kingdom. Man (N. S.) 1983; 18: 535-552.
21. Rudiger L, Edelmann J: Population data of Y-chromosomal STRs in Lithuanian, Latvian and Estonian males. Forensic Sci Int 2001; 120: 223-225.
22. Rebala K, Mikulich AI, Tsybovsky IS et al: Y-STR variation among Slavs: Evidence for the Slavic homeland in the Middle Dnieper Basin. J Hum Genet 2007; 52: 406-414.
23. Balanovsky O, Rootsi S, Pshenichnov A et al: Two sources of the Russian patrilineal heritage in their Eurasian context. Am J of Hum Genet 2008; 82: 236-250.
24. Malyarchuk BA, Grzybowski T, Derenko MV et al: Mitochondrial DNA variability in Poles and Russians. Ann Hum Genet 2002; 66: 261-283.
25. Belyaeva O, Bermisheva M, Khrunin A et al: Mitochondrial DNA variations in Russian and Belorussian populations. Hum Biol 2003; 75: 647-660.
26. Khar'kov VN, Stepanov VA, Borinskaya SA et al: Gene pool structure of Eastern Ukrainians as inferred from the Y-chromosome haplogroups. Russ J Genet 2004; 40: 326-331.
27. Khrunin AV, Bebiakova NA, Ivanov VP, Solodilova MA, Limborskaia SA: Polymorphism of Y-chromosomal microsatellites in Russian populations from the northern and southern Russia as exemplified by the populations of Kursk and Arkhangelsk Oblast. Russ J Genet 2005; 41: 922-927.
28. Das K, Mastana SS: Genetic variation of three VNTR loci in three tribal populations of Orissa, India. Ann Hum Biol 2003; 30: 237-249.
29. Rosser ZH, Zerjal T, Hurles ME, Adojaan M et al: Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language. Am J Hum Genet 2000; 67: 1526-1543.
30. Nasidze I, Sarkisian T, Kerimov A, Toneking M: Testing hypotheses of language replacement in the Caucasus: Evidence from the Y chromosome. Hum Genet 2003; 112: 255-261.
31. Nasidze I, Ling EYS, Quinque D et al: Mitochondrial DNA and Y-chromosome variation in the Caucasus. Ann Hum Genet 2004; 68 205-222.
32. Al-Zahery N, Semino O, Benuzzi G et al: Y-chromosome and mtDNA polymorphisms in Iraq, a crossroad of the early human dispersal and of post-Neolithic migrations. Mol Phylogenet Evol 2003; 28: 458-472.
33. Cinnioǧlu C, King R, Kivisild R et al: Excavating Y-chromosome haplotype strata in Anatolia. Hum Genet 2004; 114: 127-148.
34. Regueiro M, Cadenas AM, Gayden T, Underhill PA, Herrera RJ: Iran: tricontinental nexus for Y-chromosome driven migration. Hum Hered 2006; 61: 132-143.
35. Karafet T, Xu L, Du R et al: Paternal population history of East Asia: Sources, patterns, and microevolutionary processes. Am J Hum Genet 2001; 69: 615-628.
36. Derenko M, Malyarhuk B, Denisova GA et al: Contrasting patterns of Y-chromosome variation in South Siberian populations from Baikal and Altai-Sayan regions. Hum Genet 2006; 118: 591-604.
37. Antunez-de-Mayolo G, Antunez-de-Mayolo A, Antunez-de-Mayolo P et al Phylogenetics of Worldwide populations as determined by polymorphic Alu insertions. Electrophoresis 2002; 23: 3346-3356.
38. Cadenas AM, Zhivotovsky LA, Cavalli-Sforza LL, Underhill PA, Herrera RJ: Y chromosome diversity characterizes the Gulf of Oman. Eur J Hum Genet 2008; 16: 374-386.
39. Gayden T, Cadenas AM, Regueiro M et al: The Himalayas as a directional barrier to gene flow. Am J Hum Genet 2007; 80: 884-894.
40. Hammer MF, Horai S: Y chromosomal DNA variation and the peopling of Japan. Am J Hum Genet 1995; 56: 951-962.
41. Underhill PA, Passarino G, Lin AA et al: The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations. Ann Hum Genet 2001; 65: 43-62.
42. Kayser M, Krawczak M, Excoffier L et al: An extensive analysis of Y-chromosomal microsatellite haplotypes in globally dispersed human populations. Am J Hum Genet 2001; 68: 990-1018.
43. Zhivotovsky LA, Underhill PA, Cinnioǧlu C et al: The effective mutation rate at Y chromosome short tandem repeats, with application to human population divergence time. Am J Hum Genet 2004; 74: 50-61.
44. Fenner JN: Cross-cultural estimation of the human generation interval for use in genetics-based population divergence studies. Am J Phys Ant 2005; 128: 415-423.
45. Röhl A: Network 2.0b. A program package for phylogenetic networks. Mathematisches Seminar, Universität Hamburg; Available at http://www.fluxus-engineering.com, 1997.
46. Luis JR, Rowold DJ, Regueiro M et al: The Levant versus the Horn of Africa: Evidence for bidirectional corridors of human migrations. Am J Hum Genet 2004; 74: 532-544.
47. Rohlf F: NTSYSpc. Setauket, NY: Exter Publishing, 2002.
48. Guo S, Thompson E: Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 1992; 48: 361-372.
49. Schneider S, Kueffer JM, Roessli D, Excoffler L: Arlequin v. 2.000: A Software for Population Genetics Data Analysis. Geneva: Genetics and Biometry Laboratory, University of Geneva, 2000.
50. Fechner A, Quinque D, Rychkov S et al: Boundaries and clines in the West Eurasian Y-chromosome landscape: Insights from the European part of Russia. Am J Phys Ant 2008; 137: 41-47.
51. Kasperaviciute D, Kucinskas V, Stoneking M: Y chromosome and mitochondrial DNA variation in Lithuanians. Ann Hum Genet 2004; 68: 438-452.
52. Laitinen V, Lahermo P, Sistonen P, Savontaus ML: Y-chromosomal diversity suggests that Baltic males share common Finno-Ugric-speaking forefathers. Hum Hered 2002; 53: 68-78.
53. Pericic M, Barac L, Klaric IM et al: High-resolution phylogenetic analysis of Southeastern Europe traces major episodes of paternal gene flow among Slavic populations. Mol Biol Evol 2005; 22: 1964-1975.
54. Nasidze I, Quinque D, Dupanloup I, Cordaux R, Kokshunova L, Stoneking M: Genetic evidence for the Mongolian ancestry of Kalmyks. Am J Phys Anthropol 2005; 128: 846-854.
55. Bulayeva K, Jorde LB, Ostler C, Watkins S, Bulayev O, Harpending H: Genetics and population history of Caucasus populations. Hum Biol 2003; 75: 837-853.
56. Gimbutas M: Proto-Indo-Turopean culture: the Kurgan culture during the 5th to the 3rd millennia BC; In Cardona G, Koenigswald HM, Senn A (eds): Indo-European and Indo-Europeans. Philadelphia: University of Pennsylvania Press, 1970, pp 155-198.
57. Savel'eva EA (ed): Atlas of the Komi Republic. Moscow: Dizain. Moscow: Inter'er Kartographiya, 2001, pp 552.
58. Kayser M, Brauer S, Cordaux R et al: Melanesian and Asian origins of Polynesians: MtDNA and Y chromosome gradients across the Pacific. Mol Biol Evol 2006; 23: 2234-2244.