Boundaries and clines in the west Eurasian Y-chromosome landscape: Insights from the European part of Russia

American Journal of Physical Anthropology

Volumn 137, Issue 1, 2008, Pages 41-47

  Fechner, Angela ^a   Quinque, Dominique ^a   Rychkov, Sergey ^b   Morozowa, Irina ^b   Naumova, Oksana ^b   Schneider, Yuriy ^b   Willuweit, Sascha ^c   Zhukova, Olga ^b   Roewer, Lutz ^c   Stoneking, Mark ^a   Nasidze, Ivan ^a  

^a MAX PLANCK INSTITUTE FOR EVOLUTIONARY ANTHROPOLOGY   (Germany)

^b VAVILOV INSTITUTE OF GENERAL GENETICS   (Russian Federation)

^c CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

Author keywords

Europe; Russia; Ural region; Y chromosome

Indexed keywords

ARTICLE; CELL LINEAGE; CLIMATE; CONTROLLED STUDY; EASTERN EUROPE; GENE POOL; GEOGRAPHY; HUMAN; MALE; MIGRATION; NORMAL HUMAN; RUSSIAN FEDERATION; SINGLE NUCLEOTIDE POLYMORPHISM; Y CHROMOSOME;

CHROMOSOMES, HUMAN, Y; EUROPEAN CONTINENTAL ANCESTRY GROUP; GENETIC HETEROGENEITY; GENETICS, POPULATION; HAPLOTYPES; HUMANS; MALE; POLYMORPHISM, SINGLE NUCLEOTIDE; RUSSIA; VARIATION (GENETICS);

EID: 50049113902     PISSN: 00029483     EISSN: 10968644     Source Type: Journal    
DOI: 10.1002/ajpa.20838     Document Type: Article

References (35)

1. Balanovsky O, Rootsi S, Pshenichnov A, Kivisild T, Churnosov M, Evseeva I, Pocheshkhova E, Boldyreva M, Yankovsky N, Balanovska E, Villems R. 2008. Two sources of the Russian patrilineal heritage in their Eurasian context. Am J Hum Genet 82:236-250.
2. Barbujani G, Oden NL, Sokal R. 1989. Detecting regions of abrupt change in maps of biological variables. Syst Zool 38:376-389.
3. Cordaux R, Deepa E, Vishwanathan H, Stoneking M. 2004. Genetic evidence for the demie diffusion of agriculture to India. Science 304:1125.
4. Crida A, Manel S. 2007. Wombsoft: an R package that implements the Wombling method to identify genetic boundary. Mol Ecol Notes 7:588-591.
5. ETHNOLOGUE. 2000. www.ethnologue.com.
6. Hammer MF, Horai S. 1995. Y chromosomal DNA variation and the peopling of Japan. Am J Hum Genet 56:951-962.
7. Helgason A, Nicholson J, Sykes B, Hill EW, Bradley DG, Bosnes V, Gulcher JR, Ward R, Stefansson K. 2000. Estimating Scandinavian and Gaelic ancestry in the male settlers of Iceland. Am J Hum Genet 67:697-717.
8. Kasperaviciute D, Kucinskas V, Stoneking M. 2003. Y Chromosome and mitochondrial DNA variation in Lithuanians. Ann Hum Genet 68:438-452.
9. Kayser M, Brauer S, Weiss G, Underhill PA, Roewer L, Schiefenhovel W Stoneking M. 2000. Melanesian origin of Polynesian Y chromosomes. Curr Biol 10:1237-1246.
10. Kayser M, Lao O, Anslinger K, Augustin C, Bargel G, Edelmann J, Elias S, Heinrich M, Henke J, Henke L, Hohoff C, Illing A, Jonkisz A, Kuzniar P, Lebioda A, Lessig R, Lewicki S, Maciejewska A, Monies D, Pawlowski R, Poetsch M, Schmid D, Schmidt U, Schneider P, Stradmann-Bellinghausen B, Szibor R, Wegener R, Wozniak M, Zoledziewska M, Roewer L, Dobosz T, Ploski R. 2005. Significant genetic differentiation between Poland and Germany follows present-day political borders, as revealed by Y-chromosome analysis. Hum Genet 117:428-443.
11. Ke Y, Su B, Song X, Lu D, Chen L, Li H, Qi C, Marzuki S, Deka R, Underhill P, Xiao C, Shriver M, Lell J, Wallace D, Wells RS, Seielstad M, Oefner P, Zhu D, Jin J, Huang W, Chakraborty R, Chen Z, Jin L. 2001. African origin of modern humans in East Asia: a tale of 12,000 Y chromosomes. Science 292:1151-1153.
12. Kharkov V, Stepanov V, Feshchenko S, Borinskaya S, Yankovsky N, Puzyrev V. 2005. Frequencies of Y Chromosome binary haplogroups in Belarussians. Russ J Genet 41:928-931.
13. Lahermo P, Sajantila A, Sistonen P, Lukka M, Aula P, Peltonen L, Savontaus ML. 1996. The genetic relationship between the Finns and the Finnish Saami (Lapps): analysis of nuclear DNA and mtDNA. Am J Hum Genet 58:1309-1322.
14. Lahermo P, Savontaus ML, Sistonen P, Beres J, de Knijff P, Aula P, Sajantila A. 1999. Y chromosomal polymorphisms reveal founding lineages in the Finns and the Saami. Eur J Hum Genet 7:447-458.
15. Lappalainen T, Koivumäki S, Salmela E, Huoponen K, Sistonen P, Savontaus M-L, Lahermo P. 2006. Regional differences among the Finns: a Y-chromosomal perspective. Gene 376:207-215.
16. Malyarchuk B, Derenko MGT, Lunkina ACJ, Rychkov S, Morozova I, Denisova G, Miscicka-Sliwka D. 2004. Differentiation of mitochondrial DNA and Y Chromosomes in Russian populations. Hum Biol 76:877-900.
17. Marjanovic D, Fornarino S, Montagna S, Primorac D, Hadziselimovic R, Vidovic S, Pojskic N, Battaglia V, Achilli A, Drobnic K, Andjelinovic S, Torroni A, Santachiara-Benerecetti A, Semino O. 2005. The peopling of modern Bosnia-Herzegovina: Y-chromosome haplogroups in the three main ethnic groups. Ann Hum Genet 69:757-763.
18. Nasidze I, Ling EY, Quinque D, Dupanloup I, Cordaux R, Rychkov S, Naumova O, Zhukova O, Sarraf-Zadegan N, Naderi GA, Asgary S, Sardas S, Farhud DD, Sarkisian T, Asadov C, Kerimov A, Stoneking M. 2004. Mitochondrial DNA and Y-chromosome variation in the Caucasus. Ann Hum Genet 68:205-221.
19. Nasidze I, Sarkisian T, Kerimov A, Stoneking M. 2003. Testing hypotheses of language replacement in the Caucasus: evidence from the Y-chromosome. Hum Genet 112:255-261.
20. Passarino G, Cavalleri G, Lin A, Cavalli-Sforza L, Borresen-Dale A-L, Underhill P. 2002. Different genetic components in the Norwegian population revealed by the analysis of mtDNA and Y chromosome polymorphisms. Eur J Hum Genet 10:521-529.
21. Raitio M, Lindroos K, Laukkanen M, Pastinen T, Sistonen P, Sajantila A, Syvänen A-C. 2001. Y-Chromosomal SNPs in Finno-ugric-speaking populations analyzed by minisequencing on microarrays. Genome Res 11:471-482.
22. Rootsi S, Magri C, Kivisild T, Benuzzi G, Help H, Bermisheva M, Kutuev I, Barac L, Pericic M, Balanovsky O, Pshenichnov A, Dion D, Grobei M, Zhivotovsky LA, Battaglia V, Achilli A, Al-Zahery N, Parik J, King R, Cinnioglu C, Khusnutdinova E, Rudan P, Balanovska E, Scheffrahn W, Simonescu M, Brehm A, Goncalves R, Rosa A, Moisan JP, Chaventre A, Ferak V, Furedi S, Oefner PJ, Shen P, Beckman L, Mikerezi I, Terzic R, Primorac D, Cambon-Thomsen A, Krumina A, Torroni A, Underhill PA, Santachiara-Benerecetti AS, Villems R, Semino O. 2004. Phylogeography of Y-chromosome haplogroup I reveals distinct domains of prehistoric gene flow in Europe. Am J Hum Genet 75:128-137.
23. Rootsi S, Zhivotovsky L, Baldovic M, Kayser M, Kutuev I, Khusainova R, Bermisheva M, Gubina M, Fedorova S, Ilumae A, Khusnutdinova E, Voevoda M, Osipova L, Stoneking M, Lin A, Ferak V, Parik J, Kivisild T, Underhill P, Villems R. 2007. A counter-clockwise northern route of the Y-chromosome haplogroup N from Southeast Asia towards Europe. Eur J Hum Genet 15:204-211.
24. Rosser ZH, Zerjal T, Hurles ME, Adojaan M, Alavantic D, Amorim A, Amos W, Armenteros M, Arroyo E, Barbujani G, Beckman G, Beckman L, Bertranpetit J, Bosch E, Bradley DG, Brede G, Cooper G, Corte-Real HB, de Knijff P, Decorte R, Dubrova YE, Evgrafov O, Gilissen A, Glisic S, Golge M, Hill EW, Jeziorowska A, Kalaydjieva L, Kayser M, Kivisild T, Kravchenko SA, Krumina A, Kucinskas V, Lavinha J, Livshits LA, Malaspina P, Maria S, McElreavey K, Meitinger TA, Mikelsaar AV, Mitchell RJ, Nafa K, Nicholson J, Norby S, Pandya A, Parik J, Patsalis PC, Pereira L, Peterlin B, Pielberg G, Prata MJ, Previdere C, Roewer L, Rootsi S, Rubinsztein DC, Saillard J, Santos FR, Stefanescu G, Sykes BC, Tolun A, Villems R, Tyler-Smith C, Jobling MA. 2000. Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language. Am J Hum Genet 67:1526-1543.
25. Schneider S, Roessli D, Excoffier L. 2000. Arlequin ver 2.000: a software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland.
26. Semino O, Passarino G, Oefner PJ, Lin AA, Arbuzova S, Beckman LE, de Benedictis G, Francalacci P, Kouvatsi A, Limborska S, Marcikiae M, Mika A, Mika B, Primorac D, Santachiara-Benerecetti AS, Cavalli-Sforza LL, Underhill PA. 2000. The genetic legacy of Paleolithic Homo sapiens in extant Europeans: a Y chromosome perspective. Science 290:1155-1159.
27. Underhill PA, Shen P, Lin AA, Jin L, Passarino G, Yang WH, Kauffman E, Bonne-Tamir B, Bertranpetit J, Francalacci P, Ibrahim M, Jenkins T, Kidd JR, Mehdi SQ, Seielstad MT, Wells RS, Piazza A, Davis RW, Feldman MW, Cavalli-Sforza LL, Oefner PJ. 2000. Y chromosome sequence variation and the history of human populations. Nat Genet 26:358-361.
28. Wells RS, Yuldasheva N, Ruzibakiev R, Underhill PA, Evseeva I, Blue-Smith J, Jin L, Su B, Pitchappan R, Shanmugalakshmi S, Balakrishnan K, Read M, Pearson NM, Zerjal T, Webster MT, Zholoshvili I, Jamarjashvili E, Gambarov S, Nikbin B, Dostiev A, Aknazarov O, Zalloua P, Tsoy I, Kitaev M, Mirrakhimov M, Chariev A, Bodmer WF. 2001. The Eurasian heartland: a continental perspective on Y-chromosome diversity. Proc Natl Acad Sci USA 18:10244-10249.
29. Wilson J, Erlandsson R. 1998. Sexing of human and other primate DNA. Biol Chem 379:1287-1288.
30. Womble W. 1951. Differential systematics. Science 28:315-322.
31. Wozniak M, Grzybowski T, Starzynski J, Marciniak T 2007. Conituity of Y chromosome haplotypes in the populations of southern Poland before and after the Second World War. Forensic Sci Int: Genet 1:134-140.
32. Y-chromosome-consortium. 2002. A nomenclature system for the tree of Human Y-chromosomal binary haplogroups. Genome Res 2:339-348.
33. Yoshimoto K, Iwahana H, Fukuda A, Sano T, Itakura M. 1993. Rare mutations of the GS alpha subunit gene in human endocrine tumors. Mutation detection by polymerase chain reaction-primer-introduced restriction analysis. Cancer 72:1386-1393.
34. Zerjal T, Beckman L, Beckman G, Mikelsaar AV, Krumina A, Kucinskas V, Hurles ME, Tyler-Smith C. 2001. Geographical, linguistic and cultural influences on genetic diversity: Y-Chromosomal distribution in Northern European populations. Mol Biol Evol 18:1077-1087.
35. Zerjal T, Dashnyam B, Pandya A, Kayser M, Roewer L, Santos FR, Schiefenhovel W, Fretwell N, Jobling MA, Harihara S, Shimizu K, Semjidmaa D, Sajantila A, Salo P, Crawford MH, Ginter EK, Evgrafov OV, Tyler-Smith C. 1997. Genetic relationships of Asians and Northern Europeans, revealed by Y-chromosomal DNA analysis. Am J Hum Genet 60:1174-1183.