SoxS regulates the expression of the Salmonella enterica serovar Typhimurium ompW gene

Microbiology

Volumn 155, Issue 8, 2009, Pages 2490-2497

  Gil, F ^a   Hernandez Lucas I ^b   Polanco, R ^a   Pacheco, N ^a   Collao, B ^a   Villareal, J M ^a   Nardocci, G ^a   Calva, G ^b   Saavedra, C P ^a  

^a UNIVERSIDAD ANDRÉS BELLO   (Chile)

^b INSTITUTO DE BIOTECNOLOGÍA   (Mexico)

Author keywords

[No Author keywords available]

Indexed keywords

DEOXYRIBONUCLEASE I; OUTER MEMBRANE PROTEIN; OUTER MEMBRANE PROTEIN W; PARAQUAT; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR SOXS; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CONTROLLED STUDY; DNA FLANKING REGION; DNA FOOTPRINTING; GEL MOBILITY SHIFT ASSAY; GENE EXPRESSION REGULATION; GENE IDENTIFICATION; GENE LOCATION; NONHUMAN; OXIDATIVE STRESS; PRIORITY JOURNAL; PROMOTER REGION; REPORTER GENE; SALMONELLA TYPHIMURIUM; TRANSCRIPTION INITIATION; TRANSCRIPTION INITIATION SITE;

BACTERIAL OUTER MEMBRANE PROTEINS; BACTERIAL PROTEINS; DNA, BACTERIAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ELECTROPHORETIC MOBILITY SHIFT ASSAY; GENE EXPRESSION REGULATION, BACTERIAL; HERBICIDES; PARAQUAT; PROMOTER REGIONS, GENETIC; SALMONELLA TYPHIMURIUM; SEQUENCE ANALYSIS, DNA; TRANS-ACTIVATORS; TRANSCRIPTIONAL ACTIVATION;

SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM;

EID: 69949131704     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.027433-0     Document Type: Article

References (43)

1. Aono, R., Tsukagoshi, N. & Yamamoto, M. (1998). Involvement of outer membrane protein TolC, a possible member of the mar-sox regulon, in maintenance and improvement of organic solvent tolerance of Escherichia coli K-12. J Bacteriol 180, 938-944.
2. Barbosa, T. M. & Levy, S. B. (2000). Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA. J Bacteriol 182, 3467-3474.
3. Benz, R. & Bauer, K. (1988). Permeation of hydrophilic molecules through the outer membrane of Gram-negative bacteria. Eur J Biochem 176, 1-9.
4. Chatfield, S. N., Dorman, C. J., Hayward, C. & Dougan, G. (1991). Role of ompR-dependent genes in Salmonella typhimurium virulence: mutants deficient in both ompC and ompF are attenuated in vivo. Infect Immun 59, 449-452.
5. Cohen, S. P., McMurry, L. M. & Levy, S. B. (1988). marA locus causes decreased expression of OmpF porin in multiple-antibiotic resistant (Mar) mutants of Escherichia coli. J Bacteriol 170, 5416-5422.
6. Datsenko, K. A. & Wanner, B. L. (2000). One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97, 6640-6645.
7. De la Cruz, M. A., Fernández-Mora, M., Guadarrama, C., Flores-Valdez, M. A., Bustamante, V. H., Vázquez, A. & Calva, E. (2007). LeuO antagonizes H-NS and StpA-dependent repression in Salmonella enterica ompS1. Mol Microbiol 66, 727-743.
8. Delihas, N. & Forst, S. (2001). MicF: an antisense RNA gene involved in response of Escherichia coli to global stress factor. J Mol Biol 313, 1-12.
9. Dupont, M., James, C. E., Chevalier, J. & Pagès, J. M. (2007). An early response to environmental stress involves regulation of OmpX and OmpF, two enterobacterial outer membrane pore-forming proteins. Antimicrob Agents Chemother 51, 3190-3198.
10. Fawcett, W. P. & Wolf, R. E., Jr (1994). Purification of a MalE-SoxS fusion protein and identification of the control sites of Escherichia coli superoxide-inducible genes. Mol Microbiol 14, 669-679.
11. Fawcett, W. P. & Wolf, R. E., Jr (1995). Genetic definition of the Escherichia coli zwf 'soxbox', the DNA binding site for SoxS-mediated induction of glucose 6-phosphate dehydrogenase in response to superoxides. J Bacteriol 177, 1742-1750.
12. Gil, F., Ipinza, F., Fuentes, J., Fumeron, R., Villarreal, J. M., Aspée, A., Mora, G. C., Vásquez, C. C. & Saavedra, C. (2007). The ompW (porin) gene mediates methyl viologen (paraquat) efflux in Salmonella enterica serovar Typhimurium. Res Microbiol 158, 529-536.
13. Giró, M., Carrillo, N. & Krapp, A. (2006). Glucose-6-phosphate dehydrogenase and ferredoxin-NADP(H) reductase contribute to damage repair during the soxRS response of Escherichia coli. Microbiology 152, 1119-1128.
14. Greenberg, J. T.,Monach, P. A., Chou, J.H., Josephy, P. D. & Demple, B. (1990). Positive control of a global antioxidant defense regulon activated by superoxide-generating agents in Escherichia coli. Proc Natl Acad Sci U S A 87, 6181-6185.
15. Griffith, K. L. & Wolf, R. E., Jr (2001). Systematic mutagenesis of the DNA binding sites for SoxS in the Escherichia coli zwf and fpr promoters: identifying nucleotides required for DNA binding and transcription activation. Mol Microbiol 40, 1141-1154.
16. Groisman, E. A. & Ochman, H. (1994). How to become a pathogen. Trends Microbiol 2, 289-294.
17. Hassan, H. M. & Fridovich, I. (1979). Paraquat and Escherichia coli. J Biol Chem 254, 10846-10852.
18. Hernández-Lucas, I., Gallego-Hernández, A. L., Encarnación, S., Fernández-Mora, M., Martínez-Batallar, A. G., Salgado, H., Oropeza, R. & Calva, E. (2008). The LysR-type transcriptional regulator LeuO controls the expression of several genes in Salmonella enterica serovar Typhi. J Bacteriol 190, 1658-1670.
19. Ho, E. M., Chang, H. W., Kim, S. I., Kahng, H. Y. & Oh, K. H. (2004). Analysis of TNT (2,4,6-trinitrotoluene)-inducible cellular responses and stress shock proteome in Stenotrophomonas sp. OK-5. Curr Microbiol 49, 346-352.
20. Imlay, J. A. (2008). Cellular defenses against superoxide and hydrogen peroxide. Annu Rev Biochem 77, 755-776.
21. Jeanteur, D., Lakey, J. H. & Pattus, F. (1991). The bacterial porin superfamily: sequence alignment and structure prediction. Mol Microbiol 5, 2153-2164.
22. Klebba, P. E. (2002). Mechanism of maltodextrin transport through LamB. Res Microbiol 153, 417-424.
23. Koebnik, R., Locher, K. P. & Van Gelder, P. (2000). Structure and function of bacterial outer membrane proteins: barrels in a nutshell. Mol Microbiol 37, 239-253.
24. Li, Z. & Demple, B. (1994). SoxS, an activator of superoxide stress genes in Escherichia coli. J Biol Chem 269, 18371-18377.
25. Li, Z. & Demple, B. (1996). Sequence specificity for DNA binding by Escherichia coli SoxS and Rob proteins. Mol Microbiol 20, 937-945.
26. Martin, R. G., Gillette, W. K., Rhee, S. & Rosner, J. L. (1999). Structural requirements for marbox function in transcriptional activation of mar/sox/rob regulon promoters in Escherichia coli: sequence, orientation and spatial relationship to the core promoter. Mol Microbiol 34, 431-441.
27. Martin, R. G., Gillette, W. K. & Rosner, J. L. (2000). Promoter discrimination by the related transcriptional activators MarA and SoxS: differential regulation by differential binding. Mol Microbiol 35, 623-634.
28. Meyer, P. N., Wilmes-Riesenberg, M. R., Stathopoulos, C. & Curtiss, R., III (1998). Virulence of a Salmonella typhimurium OmpD mutant. Infect Immun 66, 387-390.
29. Morimyo, M. (1988). Isolation and characterization of methyl viologen-sensitive mutants of Escherichia coli K-12. J Bacteriol 170, 2136-2142.
30. Nandi, B., Nandy, R. K., Sarkar, A. & Ghose, A. C. (2005). Structural features, properties and regulation of the outer-membrane protein W (OmpW) of Vibrio cholerae. Microbiology 151, 2975-2986.
31. Nikaido, H. (1996). Multidrug efflux pumps of Gram-negative bacteria. J Bacteriol 178, 5853-5859.
32. Paterson, E. S., Boucher, S. E. & Lambert, I. B. (2002). Regulation of the nfsA gene in Escherichia coli by SoxS. J Bacteriol 184, 51-58.
33. Pomposiello, P. J. & Demple, B. (2000). Identification of SoxS-regulated genes in Salmonella enterica serovar Typhimurium. J Bacteriol 182, 23-29.
34. Pomposiello, P. J., Bennik, M. H. J. & Demple, B. (2001). Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. J Bacteriol 183, 3890-3902.
35. Pomposiello, P. J., Koutsolioutsou, A., Carrasco, D. & Demple, B. (2003). SoxRS-regulated expression and genetic analysis of the yggX gene of Escherichia coli. J Bacteriol 185, 6624-6632.
36. Rodríguez-Morales, O., Fernández-Mora, M., Hernández-Lucas, I., Vázquez, A., Puente, J. L. & Calva, E. (2006). Salmonella enterica serovar Typhimurium ompS1 and ompS2 mutants are attenuated for virulence in mice. Infect Immun 74, 1398-1402.
37. Scandalios, J. G. (2002). Oxidative stress responses - what have genome-scale studies taught us? Genome Biol 3, REVIEWS1019.
38. Storz, G. & Imlay, J. A. (1999). Oxidative stress. Curr Opin Microbiol 2, 188-194.
39. van der Straaten, T., Zulianello, L., van Diepen, A., Granger, D. L., Janssen, R. & van Dissel, J. T. (2004). Salmonella enterica serovar Typhimurium RamA, intracellular oxidative stress response, and bacterial virulence. Infect Immun 72, 996-1003.
40. Weiss, M. S., Abele, U., Weckesser, J., Welte, W., Schiltz, E. & Schulz, G. E. (1991). Molecular architecture and electrostatic properties of a bacterial porin. Science 254, 1627-1630.
41. Xu, C., Wang, S., Ren, H., Lin, X. & Wu, L. (2005). Protein analysis on the expression of outer membrane proteins of Vibrio alginolyticus at different sodium concentrations. Proteomics 5, 3142-3152.
42. Yankovskaya, V., Horsefield, R., Törnroth, S., Luna-Chavez, C., Myoshi, H., Léger, C., Byrne, B., Cecchini, G. & Iwata, S. (2003). Architecture of succinate dehydrogenase and reactive oxygen species generation. Science 299, 700-704.
43. Zgurskaya, H. I. & Nikaido, H. (2000). Multidrug resistance mechanism: drug efflux across two membranes. Mol Microbiol 37, 219-225.