Identification of SoxS-regulated genes in Salmonella enterica serovar Typhimurium

Journal of Bacteriology

Volumn 182, Issue 1, 2000, Pages 23-29

  Pomposiello, Pablo J ^a   Demple, Bruce ^a  

^a HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GALACTOSIDASE; NUCLEOTIDE; PARAQUAT; SUPEROXIDE;

ANTIBIOTIC RESISTANCE; ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; GENE ACTIVATION; GENE DISRUPTION; GENE EXPRESSION; GENE INSERTION; GENE LIBRARY; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATIVE STRESS; PRIORITY JOURNAL; SALMONELLA ENTERICA; SALMONELLA TYPHIMURIUM;

NEGIBACTERIA; SALMONELLA ENTERICA; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; SALMONELLA TYPHIMURIUM; TYPHIMURIUM;

EID: 0033989893     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.182.1.23-29.2000     Document Type: Article

References (38)

1. Alekshun, M. N., and S. B. Levy. 1997. Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon. Antimicrob. Agents Chemother. 41:2067-2075.
2. Altshul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
3. Amábile-Cuevas, C. F., and B. Demple. 1991. Molecular characterization of the soxRS genes of Escherichia coli: two genes control a superoxide stress regulon. Nucleic Acids Res. 19:4479-4484.
4. Ariza, R. R., Z. Li, N. Ringstad, and B. Demple. 1995. Activation of multiple antibiotic resistance and binding of stress-inducible promoters by Escherichia coli Rob protein. J. Bacteriol. 177:1655-1661.
5. Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, and K. Strahl (ed.). 1987. Current protocols in molecular biology. John Wiley & Sons, New York, N.Y.
6. Bauer, C. C., L. Scappino, and R. Haselkorn. 1993. Growth of the cyanobacterium Anabaena on molecular nitrogen: NifJ is required when iron is limited. Proc. Natl. Acad. Sci. USA 90:8812-8816.
7. + reductase: activation of E. coli anaerobic ribonucleotide reduction, cloning of the gene (fpr), and overexpression of the protein. J. Bacteriol 175:1590-1595.
8. Blattner, F. R., G. Plunkett III, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
9. Bolivar, F., R. Rodriguez, P. Greene, M. Betlach, H. Heynecker, and H. Boyer. 1977. Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2:95-113.
10. Castilho, B. A., P. Olfson, and M. J. Casabadan. 1984. Plasmid insertion mutagenesis and lac gene fusions with Mini-Mu bacteriophage transposons. J. Bacteriol. 158:488-495.
11. Chou, J. H., J. T. Greenberg, and B. Demple. 1993. Posttranscriptional repression of Escherichia coli OmpF protein in response to redox stress: positive control of the micF antisense RNA by the soxRS locus. J. Bacteriol. 175:1026-1031.
12. Compan, I., and D. Touati. 1993. Interaction of six global transcription regulators in expression of manganese superoxide dismutase in Escherichia coli K-12. J. Bacteriol. 175:1687-1696.
13. Cunningham, R. P., S. M. Saporito, S. G. Spitzer, and B. Weiss. 1986. Endonuclease IV (nfo) mutant of Escherichia coli. J. Bacteriol. 168:1120-1127.
14. De Groote, M. A., U. A. Ochsner, M. U. Shiloh, C. Nathan, J. M. McCord, M. C. Dinauer, S. J. Libby, A. Vazquez-Torres, Y. Xu, and F. C. Fang. 1997. Periplasmic superoxide dismutase protects Salmonella typhimurium from products of phagocyte NADPH-oxidase and nitric oxide synthase. Proc. Natl. Acad. Sci. USA 94:13997-14001.
15. Esterling, L., and N. Delihas. 1994. The regulatory RNA gene micF is present in several species of Gram-negative bacteria and is phylogenetically conserved. Mol. Microbiol. 12:639-646.
16. Fang, F., A. Vazquez-Torres, and Y. Xu. 1997. The transcriptional regulator SoxS is required for resistance of Salmonella typhimurium to paraquat but not for virulence in mice. Infect. Immun. 65:5371-5375.
17. Farrant, J. L., A. Sansone, J. R. Canvin, M. J. Pallen, P. R. Langford, T. S. Wallis, G. Dougan, and J. S. Kroll. 1997 Bacterial copper-and zinc-cofactored superoxide dismutase contributes to the pathogenesis of systemic salmonellosis. Mol. Microbiol. 25:785-796.
18. Hidalgo, E., J. M. Bollinger, T. M. Bradley, C. T. Walsh, and B. Demple. 1995. Binuclear [2Fe-2S] clusters in the Escherichia coli SoxR protein and role of the metal centers in transcription. J. Biol. Chem. 270:20908-20914.
19. Hidalgo, E., and B. Demple. 1997. Adaptive responses to oxidative stress: the soxRS and oxyR regulons, p. 433-450. In E. C. Lin and A. S. Lynch (ed.), Regulation of gene expression in Escherichia coli. R. G. Landes Co., Austin, Tex.
20. Hidalgo, E., H. Ding, and B. Demple. 1997. Redox signal transduction via iron-sulfur clusters in the SoxR transcription factor. Trends Biochem. Sci. 22:207-210.
21. Hughes, K. T., and J. R. Roth. 1988. Transitory cis complementarity: a method for providing transposition functions to defective tranposons. Genetics 119:9-12.
22. Jair, K. W., W. P. Fawcett, N. Fujita, A. Ishihama, and R. E. Wolf, Jr. 1996. Ambidextrous transcriptional activation by SoxS: requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of the Escherichia coli superoxide-inducible genes. Mol. Microbiol. 19:306-317.
23. Li, Z., and B. Demple. 1994. SoxS, an activator of superoxide stress genes in Escherichia coli. Purification and interaction with DNA. J. Biol. Chem. 269: 18371-18377.
24. Liochev, S. I., A. Hausladen, and I. Fridovich. 1999. Nitroreductase A is regulated as a member of the soxRS regulon of Escherichia coli. Proc. Natl. Acad. Sci. USA 96:3537-3539.
25. Ma, D., M. Alberti, C. Lynch, H. Nikaido, and J. E. Hearst. 1996. The local repressor AcrR plays a modulating role in the regulation of acrAB genes by global stress signals. Mol. Microbiol. 19:101-112.
26. Maloy, S. R., V. J. Stewart, and R. K. Taylor. 1996. Genetic analysis of pathogenic bacteria: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N. Y.
27. Miller, J. H. 1992. A short course in bacterial genetics: a laboratory manual and handbook for Escherichia coli and related bacteria. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
28. Morimyo, M. 1988. Isolation and characterization of methyl viologen-sensitive mutants of Escherichia coli K-12. J. Bacteriol. 170:2136-2142.
29. Nikaido, H. 1999. Microdermatology: cell surface in the interaction of microbes with the external world. J. Bacteriol. 181:4-8.
30. Nunoshiba, T., E. Hidalgo, Z. Li, and B. Demple. 1993. Negative autoregulation by the Escherichia coli SoxS protein: a dampening mechanism for the soxRS redox stress response. J. Bacteriol. 175:7492-7494.
31. Oethinger, M., I. W. Podglajen, W. V. Kern, and S. B. Levy. 1998. Overexpression of the marA or soxS regulatory gene in clinical topoisomerase mutants of Escherichia coli. Antimicrob. Agents Chemother. 42:2089-2094.
32. Reznikoff, W., and W. R. McClure. 1986. E. coli promoters, p. 1-33. In W. S. Reznikoff and I. Gold (ed.) Maximizing gene expression. Butterworths Publishers. London, United Kingdom.
33. Reznikoff, W. S. 1992. Catabolite gene activator protein activation of lac transcription. J. Bacteriol. 174:655-658.
34. Seoane, A. S., and S. B. Levy. 1995. Characterization of MarR, the repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli. J. Bacteriol. 177:3414-3419.
35. Sulavik, M. C., M. Dazer, and P. F. Miller. 1997. The Salmonella typhimurium mar Locus: molecular and genetic analyses and assessment of its role in virulence. J. Bacteriol. 179:1857-1866.
36. Tsolis, R. M., A. J. Baumler, and F. Heffron. 1995. Role of Salmonella typhimurium Mn-superoxide dismutase (SodA) in protection against early killing by J774 macrophages. Infect. Immun. 63:1739-1744.
37. Wu, J., and B. Weiss. 1992. Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli. J. Bacteriol. 174:3915-3920.
38. Wu, J., W. R. Dunham, and B. Weiss. 1995. Overproduction and physical characterization of SoxR, a [2Fe-2S] protein that governs an oxidative response regulon in Escherichia coli. J. Biol. Chem. 270:10323-10327.