A proteomic workflow for discovery of serum carrier protein-bound biomarker candidates of alcohol abuse using LC-MS/MS

Electrophoresis

Volumn 30, Issue 12, 2009, Pages 2207-2214

  Lai, Xianyin ^a   Liangpunsakul, Suthat ^a   Crabb, David W ^a   Ringham, Heather N ^a   Witzmann, Frank A ^a  

^a INDIANA UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Alcohol abuse; Biomarker; MS MS; Proteomics; Serum carrier protein

Indexed keywords

AMINO ACIDS; BODY FLUIDS; DIAGNOSIS; MOLECULAR BIOLOGY; PROTEINS;

ALCOHOL ABUSE; ALCOHOL DEPENDENCES; BOUND PROTEINS; CARRIER PROTEINS; HIGH CONFIDENCE; LC-MS-MS; MS/MS; PROTEOMICS; SERUM CARRIER PROTEIN; WORK-FLOWS;

BIOMARKERS;

APOLIPOPROTEIN; BIOLOGICAL MARKER; CARRIER PROTEIN; GELSOLIN; GLYCOPROTEIN; HEMOPEXIN; HISTIDINE RICH GLYCOPROTEIN; IMMUNOGLOBULIN; PLASMA KALLIKREIN; SELENOPROTEIN P; SEROTRANSFERRIN; TETRANECTIN; TRANSFERRIN; UNCLASSIFIED DRUG; VITRONECTIN;

ADULT; ALCOHOL ABUSE; ALCOHOLISM; ANALYTIC METHOD; ARTICLE; BLOOD ANALYSIS; CONTROLLED STUDY; DISEASE MARKER; FEMALE; HUMAN; LIQUID CHROMATOGRAPHY; MAJOR CLINICAL STUDY; MALE; MASS SPECTROMETRY; PROTEIN ANALYSIS; PROTEOMICS; QUALITATIVE ANALYSIS; QUANTITATIVE ANALYSIS; SEX DIFFERENCE;

EID: 69449104538     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200800775     Document Type: Article

References (32)

1. Li, T. K., Hewitt, B. G., Grant, B. F., Addiction 2007, 102, 1522-1530.
2. Room, R., Babor, T., Rehm, J., Lancet 2005, 365, 519-530.
3. Mathurin, P., Liver Transpl. 2005, 11, S21-S24.
4. Ewing, J. A., J. Am. Med. Assoc. 1984, 252, 1905-1907.
5. Saunders, J. B., Aasland, O. G., Babor, T. F., de la Fuente, J. R., Grant, M., Addiction 1993, 88, 791-804.
6. Ferguson, L., Ries, R., Russo, J., J. Addict. Dis. 2003, 22, 79-90.
7. Peterson, K., Alcohol Res. Health 2004, 28, 30-37.
8. Ahn, W. S., Park, S. P., Bae, S. M., Lee, J. M., Namkoong, S. E., Nam, G. H., Cho, Y. L. et al., Cancer Sci. 2005, 96, 197-201.
9. Conigrave, K. M., Degenhardt, L. J., Whitfield, J. B., Saunders, J. B., Helander, A., Tabakoff, B., Grp, W. I. S. et al., Alcohol. Clin. Exp. Res. 2002, 26, 332-339.
10. Petricoin, E. F., Ornstein, D. K., Liotta, L. A., Urol. Oncol. 2004, 22, 322-328.
11. Kasinathan, C., Vrana, K., Beretta, L., Thomas, P., Gooch, R., Worst, T., Walker, S. et al., Alcohol. Clin. Exp. Res. 2004, 28, 228-232.
12. Nomura, F., Tomonaga, T., Sogawa, K., Ohashi, T., Nezu, M., Sunaga, M., Kondo, N. et al., Proteomics 2004, 4, 1187-1194.
13. Wu, D., Tomonaga, T., Sogawa, K., Satoh, M., Sunaga, M., Nezu, M., Oh-Ishi, M. et al., Alcohol. Clin. Exp. Res. 2007, 31, S67-S71.
14. Faber, M. J., Agnetti, G., Bezstarosti, K., Lankhuizen, I. M., Dalinghaus, M., Guarnieri, C., Caldarera, C. M. et al., Cell Biochem. Biophys. 2006, 44, 11-29.
15. Seibert, V., Wiesner, A., Buschmann, T., Meuer, J., Pathol. Res. Pract. 2004, 200, 83-94.
16. Bradford, M. M., Anal. Biochem. 1976, 72, 248-254.
17. Lai, X. Y., Bacalla, R. L., Blazer-Yost, B. L., Hong, D., Mason, S. B., Witzmann, F. A. et al., Proteomics Clin. Appl. 2008, 2, 1140-1152.
18. Keller, A., Nesvizhskii, A. I., Kolker, E., Aebersold, R., Anal. Chem. 2002, 74, 5383-5392.
19. Nesvizhskii, A. I., Keller, A., Kolker, E., Aebersold, R., Anal. Chem. 2003, 75, 4646-4658.
20. Boyle, E. I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J. M., Sherlock, G. et al., Bioinformatics 2004, 20, 3710-3715.
21. Liu, H., Sadygov, R. G., Yates, J. R., III, Anal. Chem. 2004, 76, 4193-4201.
22. Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P. et al., Nat. Genet. 2000, 25, 25-29.
23. Jimenez, C. R., Piersma, S., Pham, T. V., Biomark. Med. 2007, 1, 541-565.
24. Lopez, M. F., Mikulskis, A., Kuzdzal, S., Golenko, E., Petricoin, E. F., 3rd, Liotta, L. A., Patton, W. F. et al., Clin. Chem. 2007, 53, 1067-1074.
25. Kikuchi, S., Honda, K., Handa, Y., Kato, H., Yamashita, K., Umaki, T., Shitashige, M. et al., Cancer Sci. 2007, 98, 822-829.
26. Cowen, E. W., Liu, C. W., Steinberg, S. M., Kang, S., Vonderheid, E. C., Kwak, H. S., Booher, S. et al., Br. J. Dermatol. 2007, 157, 946-953.
27. Lopez, M. F., Mikulskis, A., Kuzdzal, S., Bennett, D. A., Kelly, J., Golenko, E., DiCesare, J. et al., Clin. Chem. 2005, 51, 1946-1954.
28. McClain, C. J., Shedlofsky, S., Barve, S., Hill, D. B., Alcohol Health Res. World 1997, 21, 317-320.
29. Zakhari, S., Li, T. K., Hepatology 2007, 46, 2032-2039.
30. Anderson, N. L., Anderson, N. G., Mol. Cell. Proteomics 2002, 1, 845-867.
31. Tirumalai, R. S., Chan, K. C., Prieto, D. A., Issaq, H. J., Conrads, T. P., Veenstra, T. D., Mol. Cell. Proteomics 2003, 2, 1096-1103.
32. Kwiatkowski, D. J., Curr. Opin. Cell Biol. 1999, 11, 103-108.