-
1
-
-
0347625462
-
Status of tumor markers in ovarian cancer screening
-
Bast RC. Status of tumor markers in ovarian cancer screening. J Clin Oncol 2003;21:200-5.
-
(2003)
J Clin Oncol
, vol.21
, pp. 200-205
-
-
Bast, R.C.1
-
2
-
-
30744460160
-
Ovarian cancer in the proteomics era: Diagnosis, prognosis, and therapeutics targets
-
Boyce EA, Kohn EC. Ovarian cancer in the proteomics era: diagnosis, prognosis, and therapeutics targets. Int J Gynecol Cancer 2005;15(Suppl 3):266-73.
-
(2005)
Int J Gynecol Cancer
, vol.15
, Issue.SUPPL. 3
, pp. 266-273
-
-
Boyce, E.A.1
Kohn, E.C.2
-
3
-
-
33745602539
-
Diagnosis and management of epithelial ovarian cancer
-
Bhoola S, Hoskins WJ. Diagnosis and management of epithelial ovarian cancer. Obstet Gynecol 2006;107:1399-410.
-
(2006)
Obstet Gynecol
, vol.107
, pp. 1399-1410
-
-
Bhoola, S.1
Hoskins, W.J.2
-
5
-
-
33745479870
-
Proteomics: A new diagnostic frontier
-
Hortin GL, Jortanl SA, Ritchee, JC Jr, Valdes R Jr, Chan DW. Proteomics: a new diagnostic frontier. Clin Chem 2006;52:1218-22.
-
(2006)
Clin Chem
, vol.52
, pp. 1218-1222
-
-
Hortin, G.L.1
Jortanl, S.A.2
Ritchee Jr, J.C.3
Valdes Jr, R.4
Chan, D.W.5
-
8
-
-
0034828488
-
Proteomics in early detection of cancer
-
Srinivas PR, S. Srivastava S, Hanash S, Wright GL, Proteomics in early detection of cancer. Clin Chem 2001;47:1901-11.
-
(2001)
Clin Chem
, vol.47
, pp. 1901-1911
-
-
Srinivas, P.S.1
Srivastava, S.2
Hanash, S.3
Wright, G.L.4
-
9
-
-
1542329047
-
Serum proteomics in cancer diagnosis and management
-
Rosenblatt KP, Bryant-Greenwood P, Killian JK, Mehta A, Geho D, Espina V, et al. Serum proteomics in cancer diagnosis and management. Annu Rev Med 2004;55:97-112.
-
(2004)
Annu Rev Med
, vol.55
, pp. 97-112
-
-
Rosenblatt, K.P.1
Bryant-Greenwood, P.2
Killian, J.K.3
Mehta, A.4
Geho, D.5
Espina, V.6
-
10
-
-
4143067096
-
Three biomarkers identified from serum proteomic analysis for the detection of early stage ovarian cancer
-
Zheng Z, Bast RC Jr, Yu Y, Li J, Sokoll LJ, Rai AJ, et al. Three biomarkers identified from serum proteomic analysis for the detection of early stage ovarian cancer. Cancer Res 2004;64:5882-90.
-
(2004)
Cancer Res
, vol.64
, pp. 5882-5890
-
-
Zheng, Z.1
Bast Jr, R.C.2
Yu, Y.3
Li, J.4
Sokoll, L.J.5
Rai, A.J.6
-
11
-
-
0036324715
-
Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer
-
Li J, Zheng Z, Rosenzweig J, Wang YY, Chan DW. Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer. Clin Chem 2002;48:1296-1304.
-
(2002)
Clin Chem
, vol.48
, pp. 1296-1304
-
-
Li, J.1
Zheng, Z.2
Rosenzweig, J.3
Wang, Y.Y.4
Chan, D.W.5
-
12
-
-
0037116832
-
Use of proteomic patterns in serum to identify ovarian cancer
-
Petricoin EF, Ardekanl AM, Hitt BA, Levine PJ, Fusaro VA, Steinberg SM, et al. Use of proteomic patterns in serum to identify ovarian cancer. Lancet 2002;359:572-7.
-
(2002)
Lancet
, vol.359
, pp. 572-577
-
-
Petricoin, E.F.1
Ardekanl, A.M.2
Hitt, B.A.3
Levine, P.J.4
Fusaro, V.A.5
Steinberg, S.M.6
-
13
-
-
33745442821
-
The MALDI-TOF mass spectromatric view of the plasma proteome end peptidome
-
Hortin GL. The MALDI-TOF mass spectromatric view of the plasma proteome end peptidome. Clin Chem 2006;52:1223-37.
-
(2006)
Clin Chem
, vol.52
, pp. 1223-1237
-
-
Hortin, G.L.1
-
14
-
-
33745955373
-
Proteomic patterns for cancer diagnosis-promise end challenges
-
Whiteley GR. Proteomic patterns for cancer diagnosis-promise end challenges. Mol BioSyst 2006;2:358-63.
-
(2006)
Mol BioSyst
, vol.2
, pp. 358-363
-
-
Whiteley, G.R.1
-
15
-
-
13844316757
-
Signal in noise: Evaluating reported reproducibility of serum proteomic tests for ovarian cancer
-
Baggerly KA, Morris JS, Edmonson SR, Coombes KR. Signal in noise: evaluating reported reproducibility of serum proteomic tests for ovarian cancer. J Natl Cancer Inst 2005;97:307-9.
-
(2005)
J Natl Cancer Inst
, vol.97
, pp. 307-309
-
-
Baggerly, K.A.1
Morris, J.S.2
Edmonson, S.R.3
Coombes, K.R.4
-
16
-
-
13844315666
-
Importance of communication between producers and consumers of publicly available experimental data
-
Liotta LA, Lowenthal M, Mahta A, Conrads TP, Veenstra TD, Fishman DA, et al. Importance of communication between producers and consumers of publicly available experimental data. J Natl Cancer Inst 2005;97:310-14.
-
(2005)
J Natl Cancer Inst
, vol.97
, pp. 310-314
-
-
Liotta, L.A.1
Lowenthal, M.2
Mahta, A.3
Conrads, T.P.4
Veenstra, T.D.5
Fishman, D.A.6
-
17
-
-
0042367739
-
Point: Proteomic patterns in biological fluids: do they represent the future of cancer diagnostics?
-
Diamandis EP. Point: proteomic patterns in biological fluids: do they represent the future of cancer diagnostics? Clin Chem 2003;49:1272-5.
-
(2003)
Clin Chem
, vol.49
, pp. 1272-1275
-
-
Diamandis, E.P.1
-
18
-
-
31044448275
-
Serum peptidome for cancer detection: Spinning biologic trash into diagnostic gold
-
Liotta LA, Petricoin EF. Serum peptidome for cancer detection: spinning biologic trash into diagnostic gold. J Clin Invest 2006;116:26-30.
-
(2006)
J Clin Invest
, vol.116
, pp. 26-30
-
-
Liotta, L.A.1
Petricoin, E.F.2
-
19
-
-
25444531409
-
Analysis of albumin-associated peptides and proteins from ovarian cancer patients
-
Lowenthal MS, Mehta AI, Frogale K, Bandle RW, Areujo RP, Hood BL, et al. Analysis of albumin-associated peptides and proteins from ovarian cancer patients. Clin Chem 2005;51:1933-45.
-
(2005)
Clin Chem
, vol.51
, pp. 1933-1945
-
-
Lowenthal, M.S.1
Mehta, A.I.2
Frogale, K.3
Bandle, R.W.4
Areujo, R.P.5
Hood, B.L.6
-
20
-
-
33748294174
-
Peptidomics for cancer diagnosis: Present and future
-
Diamandis EP. Peptidomics for cancer diagnosis: present and future. J Proteome Res 2006;9:2079-82.
-
(2006)
J Proteome Res
, vol.9
, pp. 2079-2082
-
-
Diamandis, E.P.1
-
21
-
-
0346364695
-
Characterization of the low molecular weight human serum proteome
-
Tirumalai RS, Chan KC, Prieto DA, Issaq HJ, Conrads TP, Veenstra TD. Characterization of the low molecular weight human serum proteome. Mol Cell Proteomics 2003;2:1096-103.
-
(2003)
Mol Cell Proteomics
, vol.2
, pp. 1096-1103
-
-
Tirumalai, R.S.1
Chan, K.C.2
Prieto, D.A.3
Issaq, H.J.4
Conrads, T.P.5
Veenstra, T.D.6
-
22
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu H, Sadygov RG, Yates JR. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem 2004;76:4193-201.
-
(2004)
Anal Chem
, vol.76
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates, J.R.3
-
23
-
-
12444339443
-
The human serum proteome: Displey of nearly 3700 chromatographically separated protein spots on two-dimensional electrophoresis gels and identification of 325 distinct proteins
-
Pieper R, Gatlin CL, Makusky AJ, Russo PS, Schatz CR, Miller SS, et al. The human serum proteome: displey of nearly 3700 chromatographically separated protein spots on two-dimensional electrophoresis gels and identification of 325 distinct proteins. Proteomics 2003;3:1345-64.
-
(2003)
Proteomics
, vol.3
, pp. 1345-1364
-
-
Pieper, R.1
Gatlin, C.L.2
Makusky, A.J.3
Russo, P.S.4
Schatz, C.R.5
Miller, S.S.6
-
24
-
-
0003206867
-
Toward a human blood serum proteome: Analysis by multidimensional separation coupled with mass spectrometry
-
Adkins JN, Varnum SM, Auberry KJ, Moore RJ, Angell NH, Smith RD, et al. Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry. Mol Cell Proteomics 2002;1:947-55.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 947-955
-
-
Adkins, J.N.1
Varnum, S.M.2
Auberry, K.J.3
Moore, R.J.4
Angell, N.H.5
Smith, R.D.6
-
25
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
Washburn MP, Wolters D, Yates JR III. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotechnol 2001;19:242-7.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 242-247
-
-
Washburn, M.P.1
Wolters, D.2
Yates III, J.R.3
-
26
-
-
0037345828
-
A simple affinity spin tube filter method for removing high-abundant common proteins or enriching low-abundant biomarkers for serum proteomic analysis
-
Wang YY, Cheng P, Chan DW. A simple affinity spin tube filter method for removing high-abundant common proteins or enriching low-abundant biomarkers for serum proteomic analysis. Proteomics 2003;3:243-8.
-
(2003)
Proteomics
, vol.3
, pp. 243-248
-
-
Wang, Y.Y.1
Cheng, P.2
Chan, D.W.3
-
27
-
-
1142291302
-
Biomarker amplification by serum carrier protein binding
-
Mehta AI, Ross S, Lowenthal MS, Fusaro V, Fishman DA, Petricoin EF III, et al. Biomarker amplification by serum carrier protein binding. Dis Markers 2003;19:1-10.
-
(2003)
Dis Markers
, vol.19
, pp. 1-10
-
-
Mehta, A.I.1
Ross, S.2
Lowenthal, M.S.3
Fusaro, V.4
Fishman, D.A.5
Petricoin III, E.F.6
-
28
-
-
25444515944
-
High-resolution serum proteomic profiling of Alzheimer's disease samples reveals disease-specific, carrier-protein-bound mass signatures
-
Lopez MF, Mikulskis A, Kuzdzal S, Bennett D, Kelly J, Golenko E, et al. High-resolution serum proteomic profiling of Alzheimer's disease samples reveals disease-specific, carrier-protein-bound mass signatures. Clin Chem 2005;51:1946-54.
-
(2005)
Clin Chem
, vol.51
, pp. 1946-1954
-
-
Lopez, M.F.1
Mikulskis, A.2
Kuzdzal, S.3
Bennett, D.4
Kelly, J.5
Golenko, E.6
-
29
-
-
3042526342
-
An investigation into the human serum "interactome
-
Zhou M, Lucas DA, Chan KG, Issaq HJ, Petricoin EF III, Liotta LA, et al. An investigation into the human serum "interactome". Electrophoresis 2004;25:1289-98.
-
(2004)
Electrophoresis
, vol.25
, pp. 1289-1298
-
-
Zhou, M.1
Lucas, D.A.2
Chan, K.G.3
Issaq, H.J.4
Petricoin III, E.F.5
Liotta, L.A.6
-
30
-
-
31044436630
-
Differential exoprotease activities confer tumor-specific serum peptidome patterns
-
Villanueva J, Shaffer DR, Philip J, Chaparro CA, Erdjument-Bromage H, Olshen AB, et al. Differential exoprotease activities confer tumor-specific serum peptidome patterns. J Clin Invest 2006;116:271-84.
-
(2006)
J Clin Invest
, vol.116
, pp. 271-284
-
-
Villanueva, J.1
Shaffer, D.R.2
Philip, J.3
Chaparro, C.A.4
Erdjument-Bromage, H.5
Olshen, A.B.6
-
31
-
-
20844448187
-
Direct tandem mass spectrometry reveals limitations in protein profiling experiments for plasma biomarker discovery
-
Koomen JM, Li D, Xiao LC, Liu TC, Coombes KR, Abbruzzese J, et al. Direct tandem mass spectrometry reveals limitations in protein profiling experiments for plasma biomarker discovery. J Proteome Res 2005;4:972-81.
-
(2005)
J Proteome Res
, vol.4
, pp. 972-981
-
-
Koomen, J.M.1
Li, D.2
Xiao, L.C.3
Liu, T.C.4
Coombes, K.R.5
Abbruzzese, J.6
-
32
-
-
34249908736
-
-
Sing T, Sander O, Beerenwinkel N, Lengauer T. ROCR: An R Package for visualizing the performance of scoring classifiers. http://rocr.bioinf.mpi-sb. mpg.de (accessed January 2006).
-
Sing T, Sander O, Beerenwinkel N, Lengauer T. ROCR: An R Package for visualizing the performance of scoring classifiers. http://rocr.bioinf.mpi-sb. mpg.de (accessed January 2006).
-
-
-
-
33
-
-
84948746712
-
Flexible Discriminant Analysis by Optimal Scoring
-
Hastle TJ, Tibshirani R, Buja A. Flexible Discriminant Analysis by Optimal Scoring. J Am Stat Assoc 1994;89:1255-70.
-
(1994)
J Am Stat Assoc
, vol.89
, pp. 1255-1270
-
-
Hastle, T.J.1
Tibshirani, R.2
Buja, A.3
-
34
-
-
25144494760
-
Prediction error estimation: A comparison of resampling methods
-
Molinaro AM, Simon R, Pfeiffer RM. Prediction error estimation: a comparison of resampling methods. Bioinformatics 2005;21:3294-3300.
-
(2005)
Bioinformatics
, vol.21
, pp. 3294-3300
-
-
Molinaro, A.M.1
Simon, R.2
Pfeiffer, R.M.3
-
35
-
-
33746208870
-
A CK2-dependent mechanism for degradation of the PML tumor suppressor
-
Scaglioni PP, Yung TM, Cai LF, Erdjument-Bromage H, Keufman AJ, Singh B, et al. A CK2-dependent mechanism for degradation of the PML tumor suppressor. Cell 2006;126:269-83.
-
(2006)
Cell
, vol.126
, pp. 269-283
-
-
Scaglioni, P.P.1
Yung, T.M.2
Cai, L.F.3
Erdjument-Bromage, H.4
Keufman, A.J.5
Singh, B.6
-
36
-
-
17444383113
-
Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and clCAT with multidimensional liquid chromatography and tandem mass spectrometry
-
DeSouza L, Diehl G, Rodrigues MJ, Guo J, Romaschin AD, Colgan TJ, et al. Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and clCAT with multidimensional liquid chromatography and tandem mass spectrometry. J Proteome Res 2005;4:377-86.
-
(2005)
J Proteome Res
, vol.4
, pp. 377-386
-
-
DeSouza, L.1
Diehl, G.2
Rodrigues, M.J.3
Guo, J.4
Romaschin, A.D.5
Colgan, T.J.6
-
37
-
-
26944433460
-
Identification of differential genes in ovarian cancer using representational difference analysis of cDNA
-
Chen H, Wang M, Wang XY, Gao S, Wang J, Guan XM. Identification of differential genes in ovarian cancer using representational difference analysis of cDNA. Chin Med Sci J 2005;3:185-9.
-
(2005)
Chin Med Sci J
, vol.3
, pp. 185-189
-
-
Chen, H.1
Wang, M.2
Wang, X.Y.3
Gao, S.4
Wang, J.5
Guan, X.M.6
-
38
-
-
19644394534
-
Concentration of histamine in serum and tissues of the primary ductal breast cancers in women
-
Sieja K, Stanosz S, von Mach-Szczypinski J, Olewniczak S, Stanosz M. Concentration of histamine in serum and tissues of the primary ductal breast cancers in women. Breast 2005;14:236-41.
-
(2005)
Breast
, vol.14
, pp. 236-241
-
-
Sieja, K.1
Stanosz, S.2
von Mach-Szczypinski, J.3
Olewniczak, S.4
Stanosz, M.5
-
39
-
-
0345074092
-
Expression of keratin K2e in cutaneous and oral lesions: Association with keratinocyte activation, proliferation, and keratinization
-
Bloor BK, Tidman N, Leigh IM, Odell E, Dogan B, Wollina U, et al. Expression of keratin K2e in cutaneous and oral lesions: association with keratinocyte activation, proliferation, and keratinization. Am J Pathol 2003;162:963-75.
-
(2003)
Am J Pathol
, vol.162
, pp. 963-975
-
-
Bloor, B.K.1
Tidman, N.2
Leigh, I.M.3
Odell, E.4
Dogan, B.5
Wollina, U.6
-
40
-
-
28044455199
-
Altered mRNA expressions of sialyltransferases in ovarian cancers. Wang PH, Lee WL
-
Juang CM, Yang YH, Lo WH, Lai CR, Hsieh SL, Yuan CC. Altered mRNA expressions of sialyltransferases in ovarian cancers. Wang PH, Lee WL, Gynecol Oncol 2005;99:631-9.
-
(2005)
Gynecol Oncol
, vol.99
, pp. 631-639
-
-
Juang, C.M.1
Yang, Y.H.2
Lo WH, L.C.3
Hsieh, S.L.4
Yuan, C.C.5
-
41
-
-
2542568705
-
The human plasma proteome
-
Anderson NL, Polanski M, Pieper R, Gatlin T, Tirumalai RS, Contrads TP, et al. The human plasma proteome. Molec Cell Proteom 2004;3:311-26.
-
(2004)
Molec Cell Proteom
, vol.3
, pp. 311-326
-
-
Anderson, N.L.1
Polanski, M.2
Pieper, R.3
Gatlin, T.4
Tirumalai, R.S.5
Contrads, T.P.6
-
42
-
-
33748454321
-
Mechanisms of cancer-induced thrombosis in cancer
-
Rickles FR. Mechanisms of cancer-induced thrombosis in cancer. Pathophysiol Haemost Thromb 2006;35:103-10.
-
(2006)
Pathophysiol Haemost Thromb
, vol.35
, pp. 103-110
-
-
Rickles, F.R.1
-
43
-
-
30744470421
-
New tumor markers: CA125 and beyond
-
Bast RC Jr, Badgwell D, Lu Z, Marquez R, Rosen D, Liu J, et al. New tumor markers: CA125 and beyond. Int J Gynecol Cancer. 2005;15(Suppl 3):274-81.
-
(2005)
Int J Gynecol Cancer
, vol.15
, Issue.SUPPL. 3
, pp. 274-281
-
-
Bast Jr, R.C.1
Badgwell, D.2
Lu, Z.3
Marquez, R.4
Rosen, D.5
Liu, J.6
-
44
-
-
16844382968
-
Signaling intricacies take center stage in cancer cells
-
Kumar R, Hung M-C. Signaling intricacies take center stage in cancer cells. Cancer Res 2005;65:2511-5.
-
(2005)
Cancer Res
, vol.65
, pp. 2511-2515
-
-
Kumar, R.1
Hung, M.-C.2
-
45
-
-
28444478097
-
Characterization of serum biomarkers for detection of early stage ovarian cancer
-
Kozak KR, Su F, Whitelegge JP, Faull K, Reddy S, Farias-Eisner R. Characterization of serum biomarkers for detection of early stage ovarian cancer. Proteomics 2005;17:4589-96.
-
(2005)
Proteomics
, vol.17
, pp. 4589-4596
-
-
Kozak, K.R.1
Su, F.2
Whitelegge, J.P.3
Faull, K.4
Reddy, S.5
Farias-Eisner, R.6
|