-
1
-
-
0026743341
-
The electron-transport proteins of hydroxylating bacterial dioxygenases
-
Mason J.R., and Cammack R. The electron-transport proteins of hydroxylating bacterial dioxygenases. Annu. Rev. Microbiol. 46 (1992) 277-305
-
(1992)
Annu. Rev. Microbiol.
, vol.46
, pp. 277-305
-
-
Mason, J.R.1
Cammack, R.2
-
2
-
-
0000843661
-
Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation
-
Nojiri H., and Omori T. Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation. Biosci. Biotechnol. Biochem. 66 (2002) 2001-2016
-
(2002)
Biosci. Biotechnol. Biochem.
, vol.66
, pp. 2001-2016
-
-
Nojiri, H.1
Omori, T.2
-
3
-
-
0002557598
-
Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases
-
Muller F. (Ed), CRC Press, Boca Raton, FL
-
Batie C.J., Ballou D.P., and Correll C.C. Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases. In: Muller F. (Ed). Chemistry and Biochemistry of Flavoenzymes vol. 3 (1991), CRC Press, Boca Raton, FL 543-556
-
(1991)
Chemistry and Biochemistry of Flavoenzymes
, vol.3
, pp. 543-556
-
-
Batie, C.J.1
Ballou, D.P.2
Correll, C.C.3
-
5
-
-
58149094956
-
Carbazole metabolism by pseudomonads
-
Ramos J.-L., and Filloux A. (Eds), Springer, New York, NY
-
Nojiri H., and Omori T. Carbazole metabolism by pseudomonads. In: Ramos J.-L., and Filloux A. (Eds). Pseudomonas vol. 5 (2007), Springer, New York, NY 107-145
-
(2007)
Pseudomonas
, vol.5
, pp. 107-145
-
-
Nojiri, H.1
Omori, T.2
-
6
-
-
19944426997
-
Divergent structures of carbazole degradative car operons isolated from gram-negative bacteria
-
Inoue K., Widada J., Nakai S., Endoh T., Urata M., Ashikawa Y., et al. Divergent structures of carbazole degradative car operons isolated from gram-negative bacteria. Biosci. Biotechnol. Biochem. 68 (2004) 1467-1480
-
(2004)
Biosci. Biotechnol. Biochem.
, vol.68
, pp. 1467-1480
-
-
Inoue, K.1
Widada, J.2
Nakai, S.3
Endoh, T.4
Urata, M.5
Ashikawa, Y.6
-
7
-
-
15744395874
-
Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel gram-positive carbazole-degrading bacterium
-
Inoue K., Habe H., Yamane H., Omori T., and Nojiri H. Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel gram-positive carbazole-degrading bacterium. FEMS Microbiol. Lett. 245 (2005) 145-153
-
(2005)
FEMS Microbiol. Lett.
, vol.245
, pp. 145-153
-
-
Inoue, K.1
Habe, H.2
Yamane, H.3
Omori, T.4
Nojiri, H.5
-
8
-
-
0030744612
-
Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10
-
Sato S., Nam J.-W., Kasuga K., Nojiri H., Yamane H., and Omori T. Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. J. Bacteriol. 179 (1997) 4850-4858
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4850-4858
-
-
Sato, S.1
Nam, J.-W.2
Kasuga, K.3
Nojiri, H.4
Yamane, H.5
Omori, T.6
-
9
-
-
33646561203
-
Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177
-
Inoue K., Habe H., Yamane H., and Nojiri H. Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177. Appl. Environ. Microbiol. 72 (2006) 3321-3329
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3321-3329
-
-
Inoue, K.1
Habe, H.2
Yamane, H.3
Nojiri, H.4
-
10
-
-
33646562479
-
Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate
-
Urata M., Uchimura H., Noguchi H., Sakaguchi T., Takemura T., Eto K., et al. Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate. Appl. Environ. Microbiol. 72 (2006) 3198-3205
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3198-3205
-
-
Urata, M.1
Uchimura, H.2
Noguchi, H.3
Sakaguchi, T.4
Takemura, T.5
Eto, K.6
-
11
-
-
22444433648
-
Structure of the terminal oxygenase component of angular dioxygenase, carbazole 1,9a-dioxygenase
-
Nojiri H., Ashikawa Y., Noguchi H., Nam J.-W., Urata M., Fujimoto Z., et al. Structure of the terminal oxygenase component of angular dioxygenase, carbazole 1,9a-dioxygenase. J. Mol. Biol. 351 (2005) 355-370
-
(2005)
J. Mol. Biol.
, vol.351
, pp. 355-370
-
-
Nojiri, H.1
Ashikawa, Y.2
Noguchi, H.3
Nam, J.-W.4
Urata, M.5
Fujimoto, Z.6
-
12
-
-
13944256249
-
Crystal structure of the ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system
-
Nam J.-W., Noguchi H., Fujimoto Z., Mizuno H., Ashikawa Y., Abo M., et al. Crystal structure of the ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system. Proteins 58 (2005) 779-789
-
(2005)
Proteins
, vol.58
, pp. 779-789
-
-
Nam, J.-W.1
Noguchi, H.2
Fujimoto, Z.3
Mizuno, H.4
Ashikawa, Y.5
Abo, M.6
-
13
-
-
33845229149
-
Electron transfer complex formation between oxygenase and ferredoxin components in Rieske nonheme iron oxygenase system
-
Ashikawa Y., Fujimoto Z., Noguchi H., Habe H., Omori T., Yamane H., and Nojiri H. Electron transfer complex formation between oxygenase and ferredoxin components in Rieske nonheme iron oxygenase system. Structure 14 (2006) 1779-1789
-
(2006)
Structure
, vol.14
, pp. 1779-1789
-
-
Ashikawa, Y.1
Fujimoto, Z.2
Noguchi, H.3
Habe, H.4
Omori, T.5
Yamane, H.6
Nojiri, H.7
-
14
-
-
0036947146
-
Purification and characterization of carbazole 1,9a-dioxygenase, a three-component dioxygenase system of Pseudomonas resinovorans strain CA10
-
Nam J.-W., Nojiri H., Noguchi H., Uchimura H., Yoshida T., Habe H., et al. Purification and characterization of carbazole 1,9a-dioxygenase, a three-component dioxygenase system of Pseudomonas resinovorans strain CA10. Appl. Environ. Microbiol. 68 (2002) 5882-5890
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5882-5890
-
-
Nam, J.-W.1
Nojiri, H.2
Noguchi, H.3
Uchimura, H.4
Yoshida, T.5
Habe, H.6
-
15
-
-
0021895134
-
Purification and properties of ferredoxinTOL. A component of toluene dioxygenase from Pseudomonas putida F1
-
Subramanian V., Liu T.-N., Yeh W.-K., Serdar C.M., Wrackett L.P., and Gibson D.T. Purification and properties of ferredoxinTOL. A component of toluene dioxygenase from Pseudomonas putida F1. J. Biol. Chem. 260 (1985) 2355-2363
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 2355-2363
-
-
Subramanian, V.1
Liu, T.-N.2
Yeh, W.-K.3
Serdar, C.M.4
Wrackett, L.P.5
Gibson, D.T.6
-
16
-
-
0028865344
-
Purification and characterization of the Comamonas testosteroni B-356 biphenyl dioxygenase components
-
Hurtubise Y., Barriault D., Powlowski J., and Sylvestre M. Purification and characterization of the Comamonas testosteroni B-356 biphenyl dioxygenase components. J. Bacteriol. 177 (1995) 6610-6618
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6610-6618
-
-
Hurtubise, Y.1
Barriault, D.2
Powlowski, J.3
Sylvestre, M.4
-
17
-
-
0033024795
-
Functionality of biphenyl 2,3-dioxygenase components in naphthalene 1,2-dioxygenase
-
Barriault D., and Sylvestre M. Functionality of biphenyl 2,3-dioxygenase components in naphthalene 1,2-dioxygenase. Appl. Microbiol. Biotechnol. 51 (1999) 592-597
-
(1999)
Appl. Microbiol. Biotechnol.
, vol.51
, pp. 592-597
-
-
Barriault, D.1
Sylvestre, M.2
-
18
-
-
0021378817
-
An investigation of the iron-sulphur proteins of benzene dioxygenase from Pseudomonas putida by electron-spin-resonance spectroscopy
-
Geary P.J., Saboowalla F., Patil D., and Cammack R. An investigation of the iron-sulphur proteins of benzene dioxygenase from Pseudomonas putida by electron-spin-resonance spectroscopy. Biochem. J. 217 (1984) 667-673
-
(1984)
Biochem. J.
, vol.217
, pp. 667-673
-
-
Geary, P.J.1
Saboowalla, F.2
Patil, D.3
Cammack, R.4
-
19
-
-
0035830420
-
Characterization of BphF, a Rieske-type ferredoxin with a low reduction potential
-
Couture M.M.J., Colbert C.L., Babini E., Rosell F.I., Bolin J.T., and Eltis L.D. Characterization of BphF, a Rieske-type ferredoxin with a low reduction potential. Biochemistry 40 (2001) 84-92
-
(2001)
Biochemistry
, vol.40
, pp. 84-92
-
-
Couture, M.M.J.1
Colbert, C.L.2
Babini, E.3
Rosell, F.I.4
Bolin, J.T.5
Eltis, L.D.6
-
20
-
-
33846687102
-
Redox and functional analysis of the Rieske ferredoxin component of the toluene 4-monooxygenase
-
Elsen N.L., Moe L.A., McMartin L.A., and Fox B.G. Redox and functional analysis of the Rieske ferredoxin component of the toluene 4-monooxygenase. Biochemistry 46 (2007) 976-986
-
(2007)
Biochemistry
, vol.46
, pp. 976-986
-
-
Elsen, N.L.1
Moe, L.A.2
McMartin, L.A.3
Fox, B.G.4
-
22
-
-
0031574021
-
Biological identity and diversity in photosynthesis and respiration: structure of the lumen-side domain of the chloroplast Rieske protein
-
Carrell C.J., Zhang H., Cramer W.A., and Smith J.L. Biological identity and diversity in photosynthesis and respiration: structure of the lumen-side domain of the chloroplast Rieske protein. Structure 5 (1997) 1613-1625
-
(1997)
Structure
, vol.5
, pp. 1613-1625
-
-
Carrell, C.J.1
Zhang, H.2
Cramer, W.A.3
Smith, J.L.4
-
23
-
-
0034480510
-
A cluster exposed: structure of the Rieske ferredoxin from biphenyl dioxygenase and the redox properties of Rieske Fe-S proteins
-
Colbert C.L., Couture M.M.J., Eltis L.D., and Bolin J.T. A cluster exposed: structure of the Rieske ferredoxin from biphenyl dioxygenase and the redox properties of Rieske Fe-S proteins. Structure 8 (2000) 1267-1278
-
(2000)
Structure
, vol.8
, pp. 1267-1278
-
-
Colbert, C.L.1
Couture, M.M.J.2
Eltis, L.D.3
Bolin, J.T.4
-
24
-
-
34047222146
-
Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1
-
Ferraro D.J., Brown E.N., Yu C.-L., Parales R.E., Gibson D.T., and Ramaswamy S. Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1. BMC Struct. Biol. 7 (2007) 10
-
(2007)
BMC Struct. Biol.
, vol.7
, pp. 10
-
-
Ferraro, D.J.1
Brown, E.N.2
Yu, C.-L.3
Parales, R.E.4
Gibson, D.T.5
Ramaswamy, S.6
-
25
-
-
34548836830
-
Molecular mechanism of the redox-dependent interaction between NADH-dependent ferredoxin reductase and Rieske-type [2Fe-2S] ferredoxin
-
Senda M., Kishigami S., Kimura S., Fukuda M., Ishida T., and Senda T. Molecular mechanism of the redox-dependent interaction between NADH-dependent ferredoxin reductase and Rieske-type [2Fe-2S] ferredoxin. J. Mol. Biol. 373 (2007) 382-400
-
(2007)
J. Mol. Biol.
, vol.373
, pp. 382-400
-
-
Senda, M.1
Kishigami, S.2
Kimura, S.3
Fukuda, M.4
Ishida, T.5
Senda, T.6
-
26
-
-
0029055861
-
Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 Å resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis
-
Fukuyama K., Ueki N., Nakamura H., Tsukihara T., and Matsubara H. Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 Å resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis. J. Biochem. 117 (1995) 1017-1023
-
(1995)
J. Biochem.
, vol.117
, pp. 1017-1023
-
-
Fukuyama, K.1
Ueki, N.2
Nakamura, H.3
Tsukihara, T.4
Matsubara, H.5
-
27
-
-
0038746890
-
High-resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: analysis and comparison
-
Hunsicker-Wang L.M., Heine A., Chen Y., Luna E.P., Todaro T., Zhang Y.M., et al. High-resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: analysis and comparison. Biochemistry 42 (2003) 7303-7317
-
(2003)
Biochemistry
, vol.42
, pp. 7303-7317
-
-
Hunsicker-Wang, L.M.1
Heine, A.2
Chen, Y.3
Luna, E.P.4
Todaro, T.5
Zhang, Y.M.6
-
28
-
-
33846263979
-
Atomic resolution structures of Rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters
-
Kolling D.J., Brunzelle J.S., Lhee S., Crofts A.R., and Nair S.K. Atomic resolution structures of Rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters. Structure 15 (2007) 29-38
-
(2007)
Structure
, vol.15
, pp. 29-38
-
-
Kolling, D.J.1
Brunzelle, J.S.2
Lhee, S.3
Crofts, A.R.4
Nair, S.K.5
-
29
-
-
12144264228
-
Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex
-
Skjeldal L., Peterson F.C., Doreleijers J.F., Moe L.S., Pikus J.D., Volkman B.F., et al. Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex. J. Biol. Inorg. Chem. 9 (2004) 945-953
-
(2004)
J. Biol. Inorg. Chem.
, vol.9
, pp. 945-953
-
-
Skjeldal, L.1
Peterson, F.C.2
Doreleijers, J.F.3
Moe, L.S.4
Pikus, J.D.5
Volkman, B.F.6
-
30
-
-
33646551769
-
Structure of T4moC, the Rieske-type ferredoxin component of toluene 4-monooxygenase
-
Moe L.A., Bingman C.A., Wesenberg G.E., Phillips Jr. G.N., and Fox B.G. Structure of T4moC, the Rieske-type ferredoxin component of toluene 4-monooxygenase. Acta Crystallogr., Sect. D: Biol. Crystallogr. 62 (2006) 476-482
-
(2006)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.62
, pp. 476-482
-
-
Moe, L.A.1
Bingman, C.A.2
Wesenberg, G.E.3
Phillips Jr., G.N.4
Fox, B.G.5
-
31
-
-
33845499915
-
Crystallization and preliminary X-ray diffraction studies of the terminal oxygenase component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
-
Inoue K., Ashikawa Y., Usami Y., Noguchi H., Fujimoto Z., Yamane H., and Nojiri H. Crystallization and preliminary X-ray diffraction studies of the terminal oxygenase component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177. Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun. 62 (2006) 1212-1214
-
(2006)
Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun.
, vol.62
, pp. 1212-1214
-
-
Inoue, K.1
Ashikawa, Y.2
Usami, Y.3
Noguchi, H.4
Fujimoto, Z.5
Yamane, H.6
Nojiri, H.7
-
32
-
-
4444337310
-
Crystal structure of the terminal oxygenase component of biphenyl dioxygenase derived from Rhodococcus sp. strain RHA1
-
Furusawa Y., Nagarajan V., Tanokura M., Masai E., Fukuda M., and Senda T. Crystal structure of the terminal oxygenase component of biphenyl dioxygenase derived from Rhodococcus sp. strain RHA1. J. Mol. Biol. 342 (2004) 1041-1052
-
(2004)
J. Mol. Biol.
, vol.342
, pp. 1041-1052
-
-
Furusawa, Y.1
Nagarajan, V.2
Tanokura, M.3
Masai, E.4
Fukuda, M.5
Senda, T.6
-
33
-
-
0032524127
-
Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenase
-
Kauppi B., Lee K., Carredano E., Parales R.E., Gibson D.T., Eklund H., and Ramaswamy S. Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenase. Structure 6 (1998) 571-586
-
(1998)
Structure
, vol.6
, pp. 571-586
-
-
Kauppi, B.1
Lee, K.2
Carredano, E.3
Parales, R.E.4
Gibson, D.T.5
Eklund, H.6
Ramaswamy, S.7
-
34
-
-
0033523919
-
Natural engineering principles of electron tunnelling in biological oxidation-reduction
-
Page C.C., Moser C.C., Chen X., and Dutton P.L. Natural engineering principles of electron tunnelling in biological oxidation-reduction. Nature 402 (1999) 47-52
-
(1999)
Nature
, vol.402
, pp. 47-52
-
-
Page, C.C.1
Moser, C.C.2
Chen, X.3
Dutton, P.L.4
-
35
-
-
34848903250
-
Crystallization and preliminary crystallographic analysis of the ferredoxin component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
-
Inoue K., Ashikawa Y., Usami Y., Noguchi H., Fujimoto Z., Yamane H., and Nojiri H. Crystallization and preliminary crystallographic analysis of the ferredoxin component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177. Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun. 63 (2007) 855-857
-
(2007)
Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun.
, vol.63
, pp. 855-857
-
-
Inoue, K.1
Ashikawa, Y.2
Usami, Y.3
Noguchi, H.4
Fujimoto, Z.5
Yamane, H.6
Nojiri, H.7
-
36
-
-
34249951772
-
Crystallization and preliminary X-ray diffraction studies of the ferredoxin reductase component in the Rieske nonhaem iron oxygenase system carbazole 1,9a-dioxygenase
-
Ashikawa Y., Uchimura H., Fujimoto Z., Inoue K., Noguchi H., Yamane H., and Nojiri H. Crystallization and preliminary X-ray diffraction studies of the ferredoxin reductase component in the Rieske nonhaem iron oxygenase system carbazole 1,9a-dioxygenase. Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun. 63 (2007) 499-502
-
(2007)
Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun.
, vol.63
, pp. 499-502
-
-
Ashikawa, Y.1
Uchimura, H.2
Fujimoto, Z.3
Inoue, K.4
Noguchi, H.5
Yamane, H.6
Nojiri, H.7
-
37
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
40
-
-
0032790081
-
XtalView/Xfit-A versatile program for manipulating atomic coordinates and electron density
-
McRee D.E. XtalView/Xfit-A versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125 (1999) 156-165
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
41
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
Collaborative Computational Project, Number 4
-
Collaborative Computational Project, Number 4. The CCP4 suite: programs for protein crystallography. Acta Crystallogr., Sect. D: Biol. Crystallogr. 50 (1994) 760-763
-
(1994)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
42
-
-
3543012707
-
Crystallography and NMR system: a new software suite for macromolecular structure determination
-
Brünger A.D., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., et al. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr., Sect. D: Biol. Crystallogr. 54 (1998) 905-921
-
(1998)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.D.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
-
43
-
-
0003683544
-
-
Oxford Molecular Ltd., Oxford, UK
-
Laskowski R.R., MacArthur M.W., Moss D.S., and Thornton J.M. PROCHECK v.2.: Programs to Check the Stereochemical Quality of Protein Structures (1992), Oxford Molecular Ltd., Oxford, UK
-
(1992)
PROCHECK v.2.: Programs to Check the Stereochemical Quality of Protein Structures
-
-
Laskowski, R.R.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
45
-
-
0037441653
-
Structure validation by Cα geometry: φ{symbol}, ψ and Cβ deviation
-
Lovell S.C., Davis I.W., Arendall III W.B., de Bakker P.I.W., Word J.M., Prisant M.G., et al. Structure validation by Cα geometry: φ{symbol}, ψ and Cβ deviation. Proteins 50 (2003) 437-450
-
(2003)
Proteins
, vol.50
, pp. 437-450
-
-
Lovell, S.C.1
Davis, I.W.2
Arendall III, W.B.3
de Bakker, P.I.W.4
Word, J.M.5
Prisant, M.G.6
-
47
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm L., and Park J. DaliLite workbench for protein structure comparison. Bioinformatics 16 (2000) 566-567
-
(2000)
Bioinformatics
, vol.16
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
48
-
-
0031715982
-
Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
-
Shindyalov I.N., and Bourne P.E. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng. 11 (1998) 739-747
-
(1998)
Protein Eng.
, vol.11
, pp. 739-747
-
-
Shindyalov, I.N.1
Bourne, P.E.2
-
50
-
-
0345832301
-
ClusPro: an automated docking and discrimination method for the prediction of protein complexes
-
Comeau S.R., Gatchell D.W., Vajda S., and Camacho C.J. ClusPro: an automated docking and discrimination method for the prediction of protein complexes. Bioinformatics 20 (2004) 45-50
-
(2004)
Bioinformatics
, vol.20
, pp. 45-50
-
-
Comeau, S.R.1
Gatchell, D.W.2
Vajda, S.3
Camacho, C.J.4
-
51
-
-
0037080244
-
Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: applications to the molecular systems and geometric objects
-
Rocchia W., Sricharan S., Nicholls A., Alexov E., Chabrera A., and Honig B. Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: applications to the molecular systems and geometric objects. J. Comp. Chem. 23 (2002) 128-137
-
(2002)
J. Comp. Chem.
, vol.23
, pp. 128-137
-
-
Rocchia, W.1
Sricharan, S.2
Nicholls, A.3
Alexov, E.4
Chabrera, A.5
Honig, B.6
-
52
-
-
0026434593
-
Protein electron transfer rates set by the bridging secondary and tertiary structure
-
Bertan D.N., Betts J.N., and Onuchic J.N. Protein electron transfer rates set by the bridging secondary and tertiary structure. Science 252 (1991) 1285-1288
-
(1991)
Science
, vol.252
, pp. 1285-1288
-
-
Bertan, D.N.1
Betts, J.N.2
Onuchic, J.N.3
|