메뉴 건너뛰기




Volumn 72, Issue 5, 2006, Pages 3198-3205

Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate

Author keywords

[No Author keywords available]

Indexed keywords

BIOCONVERSION; CATALYSIS; ELECTRON TRANSITIONS; GENETIC ENGINEERING; SUBSTRATES;

EID: 33646562479     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.72.5.3198-3205.2006     Document Type: Article
Times cited : (33)

References (42)
  • 2
    • 0014398462 scopus 로고
    • Molecular geometry and carcinogenic activity of aromatic compounds
    • Arcos, J. C., and M. F. Argus. 1968. Molecular geometry and carcinogenic activity of aromatic compounds. New perspectives. Adv. Cancer Res. 11:305-471.
    • (1968) New Perspectives. Adv. Cancer Res. , vol.11 , pp. 305-471
    • Arcos, J.C.1    Argus, M.F.2
  • 3
    • 0034127014 scopus 로고    scopus 로고
    • A second [2Fe-2S] ferredoxin from Sphingomonas sp. strain RW1 can function as an electron donor for the dioxin dioxygenase
    • Armengaud, J., J. Gaillard, and K. N. Timmis. 2000. A second [2Fe-2S] ferredoxin from Sphingomonas sp. strain RW1 can function as an electron donor for the dioxin dioxygenase. J. Bacteriol. 182:2238-2244.
    • (2000) J. Bacteriol. , vol.182 , pp. 2238-2244
    • Armengaud, J.1    Gaillard, J.2    Timmis, K.N.3
  • 4
    • 0031859323 scopus 로고    scopus 로고
    • Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: Catabolic genes dispersed on the genome
    • Armengaud, J., B. Happe, and K. N. Timmis. 1998. Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: catabolic genes dispersed on the genome. J. Bacteriol. 180:3954-3966.
    • (1998) J. Bacteriol. , vol.180 , pp. 3954-3966
    • Armengaud, J.1    Happe, B.2    Timmis, K.N.3
  • 5
    • 0030789487 scopus 로고    scopus 로고
    • Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1
    • Armengaud, J., and K. N. Timmis. 1997. Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1. Eur. J. Biochem. 247:833-842.
    • (1997) Eur. J. Biochem. , vol.247 , pp. 833-842
    • Armengaud, J.1    Timmis, K.N.2
  • 7
    • 0002557598 scopus 로고
    • Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases
    • F. Muller (ed.), CRC Press, Boca Raton, Fla.
    • Batie, C. J., D. P. Ballou, and C. C. Correll. 1991. Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases, p. 543-556. In F. Muller (ed.), Chemistry and biochemistry of flavoenzymes, vol. 3. CRC Press, Boca Raton, Fla.
    • (1991) Chemistry and Biochemistry of Flavoenzymes , vol.3 , pp. 543-556
    • Batie, C.J.1    Ballou, D.P.2    Correll, C.C.3
  • 9
    • 0037150032 scopus 로고    scopus 로고
    • Sphingomonas sp. strain KA1, carrying a carbazole dioxygenase gene homologue, degrades chlorinated dibenzo-p-dioxins in soil
    • Habe, H., Y. Ashikawa, Y. Saiki, T. Yoshida, H. Nojiri, and T. Omori. 2002. Sphingomonas sp. strain KA1, carrying a carbazole dioxygenase gene homologue, degrades chlorinated dibenzo-p-dioxins in soil. FEMS Microbiol. Lett. 211:43-49.
    • (2002) FEMS Microbiol. Lett. , vol.211 , pp. 43-49
    • Habe, H.1    Ashikawa, Y.2    Saiki, Y.3    Yoshida, T.4    Nojiri, H.5    Omori, T.6
  • 10
    • 27744566414 scopus 로고    scopus 로고
    • The fluorene catabolic linear plasmid in Terrabacter sp. strain DBF63 carries the β-ketoadipate pathway genes, pcaRHGBDCFIJ, also found in proteobacteria
    • Habe, H., J.-S. Chung, A. Ishida, K. Kasuga, K. Ide, T. Takemura, H. Nojiri, H. Yamane, and T. Omori. 2005. The fluorene catabolic linear plasmid in Terrabacter sp. strain DBF63 carries the β-ketoadipate pathway genes, pcaRHGBDCFIJ, also found in proteobacteria. Microbiology 151:3713-3722.
    • (2005) Microbiology , vol.151 , pp. 3713-3722
    • Habe, H.1    Chung, J.-S.2    Ishida, A.3    Kasuga, K.4    Ide, K.5    Takemura, T.6    Nojiri, H.7    Yamane, H.8    Omori, T.9
  • 11
    • 0029742571 scopus 로고    scopus 로고
    • Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene
    • Hauschild, J. E., E. Masai, K. Sugiyama, T. Hatta, K. Kimbara, M. Fukuda, and K. Yano. 1996. Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene. Appl. Environ. Microbiol. 62:2940-2946.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2940-2946
    • Hauschild, J.E.1    Masai, E.2    Sugiyama, K.3    Hatta, T.4    Kimbara, K.5    Fukuda, M.6    Yano, K.7
  • 13
    • 15744395874 scopus 로고    scopus 로고
    • Diversity of carbazole-degrading bacteria having the car gene cluster: Isolation of a novel gram-positive carbazole-degrading bacterium
    • Inoue, K., H. Habe, H. Yamane, T. Omori, and H. Nojiri. 2005. Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel gram-positive carbazole-degrading bacterium. FEMS Microbiol. Lett. 245:145-153.
    • (2005) FEMS Microbiol. Lett. , vol.245 , pp. 145-153
    • Inoue, K.1    Habe, H.2    Yamane, H.3    Omori, T.4    Nojiri, H.5
  • 16
    • 0037139234 scopus 로고    scopus 로고
    • Mutagenic profiles of carbazole in the male germ cells of Swiss albino mice
    • Jha, A. M., and M. K. Bharti. 2002. Mutagenic profiles of carbazole in the male germ cells of Swiss albino mice. Mutat. Res. 500:97-101.
    • (2002) Mutat. Res. , vol.500 , pp. 97-101
    • Jha, A.M.1    Bharti, M.K.2
  • 17
    • 0034799210 scopus 로고    scopus 로고
    • Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63
    • Kasuga, K., H. Habe, J.-S. Chung, T. Yoshida, H. Nojiri, H. Yamane, and T. Omori. 2001. Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63. Biochem. Biophys. Res. Commun. 283:195-204.
    • (2001) Biochem. Biophys. Res. Commun. , vol.283 , pp. 195-204
    • Kasuga, K.1    Habe, H.2    Chung, J.-S.3    Yoshida, T.4    Nojiri, H.5    Yamane, H.6    Omori, T.7
  • 18
    • 0036400672 scopus 로고    scopus 로고
    • Isolation and characterization of Sphingomonas sp. GTIN11 capable of carbazole metabolism in petroleum
    • Kilbane, J. J., II, A. Daram, J. Abbasian, and K. J. Kayser. 2002. Isolation and characterization of Sphingomonas sp. GTIN11 capable of carbazole metabolism in petroleum. Biochem. Biophys. Res. Commun. 297:242-248.
    • (2002) Biochem. Biophys. Res. Commun. , vol.297 , pp. 242-248
    • Kilbane II, J.J.1    Daram, A.2    Abbasian, J.3    Kayser, K.J.4
  • 19
    • 0035432127 scopus 로고    scopus 로고
    • Multiplicity of aromatic ring hydroxylation dioxygenase genes in a strong PCB degrader, Rhodococcus sp. strain RHA1, demonstrated by denaturing gradient gel electrophoresis
    • Kitagawa, W., A. Suzuki, T. Hoaki, E. Masai, and M. Fukuda. 2001. Multiplicity of aromatic ring hydroxylation dioxygenase genes in a strong PCB degrader, Rhodococcus sp. strain RHA1, demonstrated by denaturing gradient gel electrophoresis. Biosci. Biotechnol. Biochem. 65:1907-1911.
    • (2001) Biosci. Biotechnol. Biochem. , vol.65 , pp. 1907-1911
    • Kitagawa, W.1    Suzuki, A.2    Hoaki, T.3    Masai, E.4    Fukuda, M.5
  • 20
    • 0024848664 scopus 로고
    • Cloning and nucleotide sequences of NADH-putidaredoxin reductase gene (camA) and putidaredoxin gene (camB) involved in cytochrome P-450cam hydroxylase of Pseudomonas putida
    • Koga, H., E. Yamaguchi, L. Matsunaga, H. Aramaki, and T. Horiuchi. 1989. Cloning and nucleotide sequences of NADH-putidaredoxin reductase gene (camA) and putidaredoxin gene (camB) involved in cytochrome P-450cam hydroxylase of Pseudomonas putida. J. Biochem. 106:831-836.
    • (1989) J. Biochem. , vol.106 , pp. 831-836
    • Koga, H.1    Yamaguchi, E.2    Matsunaga, L.3    Aramaki, H.4    Horiuchi, T.5
  • 21
    • 0033912879 scopus 로고    scopus 로고
    • Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4)
    • Laemmli, C. M., J. H. Leveau, A. J. Zehnder, and J. R. van der Meer. 2000. Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4). J. Bacteriol. 182:1465-1472.
    • (2000) J. Bacteriol. , vol.182 , pp. 1465-1472
    • Laemmli, C.M.1    Leveau, J.H.2    Zehnder, A.J.3    Van Der Meer, J.R.4
  • 22
    • 0031039131 scopus 로고    scopus 로고
    • The bphDEF meta-cleavage pathway genes involved in biphenyl/ polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphABC genes in Rhodococcus sp. strain RHA1
    • Masai, E., K. Sugiyama, N. Iwashita, S. Shimizu, J. E. Hauschild, T. Hatta, K. Kimbara, K. Yano, and M. Fukuda. 1997. The bphDEF meta-cleavage pathway genes involved in biphenyl/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphABC genes in Rhodococcus sp. strain RHA1. Gene 187:141-149.
    • (1997) Gene , vol.187 , pp. 141-149
    • Masai, E.1    Sugiyama, K.2    Iwashita, N.3    Shimizu, S.4    Hauschild, J.E.5    Hatta, T.6    Kimbara, K.7    Yano, K.8    Fukuda, M.9
  • 23
    • 0033387054 scopus 로고    scopus 로고
    • Complete analysis of genes and enzymes for gamma-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26
    • Nagata, Y., K. Miyauchi, and M. Takagi. 1999. Complete analysis of genes and enzymes for gamma-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26. J. Ind. Microbiol. Biotechnol. 23:380-390.
    • (1999) J. Ind. Microbiol. Biotechnol. , vol.23 , pp. 380-390
    • Nagata, Y.1    Miyauchi, K.2    Takagi, M.3
  • 24
    • 0028950304 scopus 로고
    • Degradation of the thiocarbamate herbicide EPTC (S-ethyl dipropylcarbamothiolate) and biosafening by Rhodococcus sp. strain NI86/21 involve an inducible cytochrome P-450 system and aldehyde dehydrogenase
    • Nagy, I., G. Schoofs, F. Compernolle, P. Proost, J. Vanderleyden, and R. de Mot. 1995. Degradation of the thiocarbamate herbicide EPTC (S-ethyl dipropylcarbamothiolate) and biosafening by Rhodococcus sp. strain NI86/21 involve an inducible cytochrome P-450 system and aldehyde dehydrogenase. J. Bacteriol. 177:676-687.
    • (1995) J. Bacteriol. , vol.177 , pp. 676-687
    • Nagy, I.1    Schoofs, G.2    Compernolle, F.3    Proost, P.4    Vanderleyden, J.5    De Mot, R.6
  • 25
    • 0036947146 scopus 로고    scopus 로고
    • Purification and characterization of carbazole 1,9a-dioxygenase, a three-component dioxygenase system of Pseudomonas resinovorans strain CA10
    • Nam, J.-W., H. Nojiri, H. Noguchi, H. Uchimura, T. Yoshida, H. Habe, H. Yamane, and T. Omori. 2002. Purification and characterization of carbazole 1,9a-dioxygenase, a three-component dioxygenase system of Pseudomonas resinovorans strain CA10. Appl. Environ. Microbiol. 68:5882-5890.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5882-5890
    • Nam, J.-W.1    Nojiri, H.2    Noguchi, H.3    Uchimura, H.4    Yoshida, T.5    Habe, H.6    Yamane, H.7    Omori, T.8
  • 26
    • 0001878070 scopus 로고
    • Characterization of wood-preserving coal-tar creosote by gas-liquid chromatography
    • Nestler, F. H. M. 1974. Characterization of wood-preserving coal-tar creosote by gas-liquid chromatography. Anal. Chem. 46:46-53.
    • (1974) Anal. Chem. , vol.46 , pp. 46-53
    • Nestler, F.H.M.1
  • 28
    • 0000843661 scopus 로고    scopus 로고
    • Molecular bases of aerobic bacterial degradation of dioxins: Involvement of angular dioxygenation
    • Nojiri, H., and T. Omori. 2002. Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation. Biosci. Biotechnol. Biochem. 66:2001-2016.
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 2001-2016
    • Nojiri, H.1    Omori, T.2
  • 29
    • 0034981075 scopus 로고    scopus 로고
    • Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10
    • Nojiri, H., H. Sekiguchi, K. Maeda, M. Urata, S. Nakai, T. Yoshida, H. Habe, and T. Omori. 2001. Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10. J. Bacteriol. 183:3663-3679.
    • (2001) J. Bacteriol. , vol.183 , pp. 3663-3679
    • Nojiri, H.1    Sekiguchi, H.2    Maeda, K.3    Urata, M.4    Nakai, S.5    Yoshida, T.6    Habe, H.7    Omori, T.8
  • 30
    • 0024109524 scopus 로고
    • The presence of two complete homologous meta pathway operons on TOL plasmid pWW53
    • Osborne, D. J., R. W. Pickup, and P. A. Williams. 1988. The presence of two complete homologous meta pathway operons on TOL plasmid pWW53. J. Gen. Microbiol. 134:2965-2975.
    • (1988) J. Gen. Microbiol. , vol.134 , pp. 2965-2975
    • Osborne, D.J.1    Pickup, R.W.2    Williams, P.A.3
  • 31
    • 0037826062 scopus 로고    scopus 로고
    • The role of active-site residues in naphthalene dioxygenase
    • Parales, R. E. 2003. The role of active-site residues in naphthalene dioxygenase. J. Ind. Microbiol. Biotechnol. 30:271-278.
    • (2003) J. Ind. Microbiol. Biotechnol. , vol.30 , pp. 271-278
    • Parales, R.E.1
  • 32
    • 0025257597 scopus 로고
    • Putidaredoxin reductase and putidaredoxin. Cloning, sequence determination and heterologous expression of the proteins
    • Peterson, J. A., M. C. Lorence, and B. Amarneh. 1990. Putidaredoxin reductase and putidaredoxin. Cloning, sequence determination and heterologous expression of the proteins. J. Biol. Chem. 265:6066-6073.
    • (1990) J. Biol. Chem. , vol.265 , pp. 6066-6073
    • Peterson, J.A.1    Lorence, M.C.2    Amarneh, B.3
  • 33
    • 0037423712 scopus 로고    scopus 로고
    • Identification of three novel salicylate 1-hydroxylases involved in the phenanthrene degradation of Sphingobium sp. strain P2
    • Pinyakong, O., H. Habe, T. Yoshida, H. Nojiri, and T. Omori. 2003. Identification of three novel salicylate 1-hydroxylases involved in the phenanthrene degradation of Sphingobium sp. strain P2. Biochem. Biophys. Res. Commun. 301:350-357.
    • (2003) Biochem. Biophys. Res. Commun. , vol.301 , pp. 350-357
    • Pinyakong, O.1    Habe, H.2    Yoshida, T.3    Nojiri, H.4    Omori, T.5
  • 36
    • 0030744612 scopus 로고    scopus 로고
    • Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10
    • Sato, S., J.-W. Nam, K. Kasuga, H. Nojiri, H. Yamane, and T. Omori. 1997. Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. J. Bacteriol. 179:4850-4858.
    • (1997) J. Bacteriol. , vol.179 , pp. 4850-4858
    • Sato, S.1    Nam, J.-W.2    Kasuga, K.3    Nojiri, H.4    Yamane, H.5    Omori, T.6
  • 37
    • 0017575205 scopus 로고
    • Purification and properties of pyrazon dioxygenase from pyrazon-degrading bacteria
    • Sauber, K., C. Fröhner, G. Rosenberg, J. Eberspächer, and F. Lingens. 1977. Purification and properties of pyrazon dioxygenase from pyrazon-degrading bacteria. Eur. J. Biochem. 74:89-97.
    • (1977) Eur. J. Biochem. , vol.74 , pp. 89-97
    • Sauber, K.1    Fröhner, C.2    Rosenberg, G.3    Eberspächer, J.4    Lingens, F.5
  • 38
    • 0141869098 scopus 로고    scopus 로고
    • Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida
    • Sevrioukova, I. F., C. Garcia, H. Li, B. Bhaskar, and T. L. Poulos. 2003. Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida. J. Mol. Biol. 333:377-392.
    • (2003) J. Mol. Biol. , vol.333 , pp. 377-392
    • Sevrioukova, I.F.1    Garcia, C.2    Li, H.3    Bhaskar, B.4    Poulos, T.L.5
  • 39
    • 0036950947 scopus 로고    scopus 로고
    • Detailed comparison between the substrate specificities of two angular dioxygenases, dibenzofuran 4,4a-dioxygenase from Terrabacter sp. and carbazole 1,9a-dioxygenase from Pseudomonas resinovorans
    • Takagi, T., H. Nojiri, T. Yoshida, H. Habe, and T. Omori. 2002. Detailed comparison between the substrate specificities of two angular dioxygenases, dibenzofuran 4,4a-dioxygenase from Terrabacter sp. and carbazole 1,9a-dioxygenase from Pseudomonas resinovorans. Biotechnol. Lett. 24:2099-2106.
    • (2002) Biotechnol. Lett. , vol.24 , pp. 2099-2106
    • Takagi, T.1    Nojiri, H.2    Yoshida, T.3    Habe, H.4    Omori, T.5
  • 40
    • 0027203859 scopus 로고
    • The Pseudomonas putida ML2 plasmid-encoded genes for benzene dioxygenase are unusual in codon usage and low G+C content
    • Tan, H. M., H. Y. Tang, C. L. Joanou, N. H. Abdel-Wahab, and J. R. Mason. 1993. The Pseudomonas putida ML2 plasmid-encoded genes for benzene dioxygenase are unusual in codon usage and low G+C content. Gene 130:33-39.
    • (1993) Gene , vol.130 , pp. 33-39
    • Tan, H.M.1    Tang, H.Y.2    Joanou, C.L.3    Abdel-Wahab, N.H.4    Mason, J.R.5
  • 41
    • 6044272942 scopus 로고    scopus 로고
    • The complete sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation
    • Vedler, E., M. Vahter, and A. Heinaru. 2004. The complete sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation. J. Bacteriol. 186:7161-7174.
    • (2004) J. Bacteriol. , vol.186 , pp. 7161-7174
    • Vedler, E.1    Vahter, M.2    Heinaru, A.3
  • 42
    • 0031779621 scopus 로고    scopus 로고
    • Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1
    • Yamada, A., H. Kishi, K. Sugiyama, T. Hatta, K. Nakamura, E. Masai, and M. Fukuda. 1998. Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1. Appl. Environ. Microbiol. 64:2006-2012.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2006-2012
    • Yamada, A.1    Kishi, H.2    Sugiyama, K.3    Hatta, T.4    Nakamura, K.5    Masai, E.6    Fukuda, M.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.