-
1
-
-
0035193362
-
Exoribonucleases and their multiple roles in RNA metabolism
-
Deutscher MP Li Z (2001) Exoribonucleases and their multiple roles in RNA metabolism. Prog Nucleic Acid Res Mol biology 66, 67 105.
-
(2001)
Prog Nucleic Acid Res Mol Biology
, vol.66
, pp. 67-105
-
-
Deutscher, M.P.1
Li, Z.2
-
2
-
-
0030877826
-
A decade of protein engineering on ribonuclease T1 - Atomic dissection of the enzyme-substrate interactions
-
Steyaert J (1997) A decade of protein engineering on ribonuclease T1 - atomic dissection of the enzyme-substrate interactions. Eur J Biochem/FEBS 247, 1 11.
-
(1997)
Eur J Biochem/FEBS
, vol.247
, pp. 1-11
-
-
Steyaert, J.1
-
3
-
-
0034817217
-
Deciphering the mechanism of RNase T1
-
Loverix S Steyaert J (2001) Deciphering the mechanism of RNase T1. Methods Enzymol 341, 305 323.
-
(2001)
Methods Enzymol
, vol.341
, pp. 305-323
-
-
Loverix, S.1
Steyaert, J.2
-
4
-
-
0020473605
-
Specific protein-nucleic acid recognition in ribonuclease T1-2′-guanylic acid complex: An X-ray study
-
Heinemann U Saenger W (1982) Specific protein-nucleic acid recognition in ribonuclease T1-2′-guanylic acid complex: an X-ray study. Nature 299, 27 31.
-
(1982)
Nature
, vol.299
, pp. 27-31
-
-
Heinemann, U.1
Saenger, W.2
-
6
-
-
0027142366
-
The complex between ribonuclease T1 and 3′GMP suggests geometry of enzymic reaction path. An X-ray study
-
Heydenreich A, Koellner G, Choe HW, Cordes F, Kisker C, Schindelin H, Adamiak R, Hahn U Saenger W (1993) The complex between ribonuclease T1 and 3′GMP suggests geometry of enzymic reaction path. An X-ray study. Eur J Biochem/FEBS 218, 1005 1012.
-
(1993)
Eur J Biochem/FEBS
, vol.218
, pp. 1005-1012
-
-
Heydenreich, A.1
Koellner, G.2
Choe, H.W.3
Cordes, F.4
Kisker, C.5
Schindelin, H.6
Adamiak, R.7
Hahn, U.8
Saenger, W.9
-
7
-
-
0027531753
-
Functional interactions among the His40, Glu58 and His92 catalysts of ribonuclease T1 as studied by double and triple mutants
-
Steyaert J Wyns L (1993) Functional interactions among the His40, Glu58 and His92 catalysts of ribonuclease T1 as studied by double and triple mutants. J Mol Biol 229, 770 781.
-
(1993)
J Mol Biol
, vol.229
, pp. 770-781
-
-
Steyaert, J.1
Wyns, L.2
-
8
-
-
0346217622
-
Chemical modifications and kinetic study of ribonuclease Sa active site
-
Both V, Witzel HH. Zelinkova E (1982) Chemical modifications and kinetic study of ribonuclease Sa active site. Gen Physiol Biophys 2, 261 277.
-
(1982)
Gen Physiol Biophys
, vol.2
, pp. 261-277
-
-
Both, V.1
Witzel, H.H.2
Zelinkova, E.3
-
9
-
-
0022759136
-
The number and role of histidine residues in the active site of guanyloribonuclease Sa
-
Kery V, Both V, Sevcik J Zelinka J (1986) The number and role of histidine residues in the active site of guanyloribonuclease Sa. Gen Physiol Biophys 5, 405 414.
-
(1986)
Gen Physiol Biophys
, vol.5
, pp. 405-414
-
-
Kery, V.1
Both, V.2
Sevcik, J.3
Zelinka, J.4
-
10
-
-
0000446384
-
Determination and restrained least-squares refinement of the structures of ribonuclease Sa and its complex with 3′-guanylic acid at 1.8 A resolution
-
Sevcik J, Dodson EJ Dodson GG (1991) Determination and restrained least-squares refinement of the structures of ribonuclease Sa and its complex with 3′-guanylic acid at 1.8 A resolution. Acta Crystallogr B 47 (Pt 2, 240 253.
-
(1991)
Acta Crystallogr B 47 (Pt
, vol.2
, pp. 240-253
-
-
Sevcik, J.1
Dodson, E.J.2
Dodson, G.G.3
-
11
-
-
0024501923
-
Kinetic characterization of the recombinant ribonuclease from Bacillus amyloliquefaciens (barnase) and investigation of key residues in catalysis by site-directed mutagenesis
-
Mossakowska DE, Nyberg K Fersht AR (1989) Kinetic characterization of the recombinant ribonuclease from Bacillus amyloliquefaciens (barnase) and investigation of key residues in catalysis by site-directed mutagenesis. Biochemistry 28, 3843 3850.
-
(1989)
Biochemistry
, vol.28
, pp. 3843-3850
-
-
Mossakowska, D.E.1
Nyberg, K.2
Fersht, A.R.3
-
12
-
-
0028004435
-
Mutational analysis of the active site of RNase of Bacillus intermedius (BINASE)
-
Yakovlev GI, Moiseyev GP, Struminskaya NK, Borzykh OA, Kipenskaya LV, Znamenskaya LV, LEschinskaya IB, Chernokalskaya EB Hartley B (1994) Mutational analysis of the active site of RNase of Bacillus intermedius (BINASE). FEBS Lett 354, 305 306.
-
(1994)
FEBS Lett
, vol.354
, pp. 305-306
-
-
Yakovlev, G.I.1
Moiseyev, G.P.2
Struminskaya, N.K.3
Borzykh, O.A.4
Kipenskaya, L.V.5
Znamenskaya, L.V.6
Leschinskaya, I.B.7
Chernokalskaya, E.B.8
Hartley, B.9
-
13
-
-
0033626550
-
Mechanism of RNase T1: Concerted triester-like phosphoryl transfer via a catalytic three-centered hydrogen bond
-
Loverix S, Winqvist A, Stromberg R Steyaert J (2000) Mechanism of RNase T1: concerted triester-like phosphoryl transfer via a catalytic three-centered hydrogen bond. Chem Biol 7, 651 658.
-
(2000)
Chem Biol
, vol.7
, pp. 651-658
-
-
Loverix, S.1
Winqvist, A.2
Stromberg, R.3
Steyaert, J.4
-
14
-
-
0024297213
-
Three-dimensional structure of the ribonuclease T1 2′-GMP complex at 1.9-A resolution
-
Arni R, Heinemann U, Tokuoka R Saenger W (1988) Three-dimensional structure of the ribonuclease T1 2′-GMP complex at 1.9-A resolution. J Biol Chem 263, 15358 15368.
-
(1988)
J Biol Chem
, vol.263
, pp. 15358-15368
-
-
Arni, R.1
Heinemann, U.2
Tokuoka, R.3
Saenger, W.4
-
15
-
-
0030894595
-
Additivity of protein-guanine interactions in ribonuclease T1
-
Loverix S, Doumen J Steyaert J (1997) Additivity of protein-guanine interactions in ribonuclease T1. J Biol Chem 272, 9635 9639.
-
(1997)
J Biol Chem
, vol.272
, pp. 9635-9639
-
-
Loverix, S.1
Doumen, J.2
Steyaert, J.3
-
16
-
-
0027520474
-
Structure and dynamics of barnase complexed with 3′-GMP studied by NMR spectroscopy
-
Meiering EM, Bycroft M, Lubienski MJ Fersht AR (1993) Structure and dynamics of barnase complexed with 3′-GMP studied by NMR spectroscopy. Biochemistry 72, 10975 10987.
-
(1993)
Biochemistry
, vol.72
, pp. 10975-10987
-
-
Meiering, E.M.1
Bycroft, M.2
Lubienski, M.J.3
Fersht, A.R.4
-
17
-
-
0036014773
-
The structure of substrate-free microbial ribonuclease binase and of its complexes with 3′GMP and sulfate ions
-
Polyakov KM, Lebedev AA, Okorokov AL, Panov KI, Schulga AA, Pavlovsky AG, Karpeisky MY Dodson GG (2002) The structure of substrate-free microbial ribonuclease binase and of its complexes with 3′GMP and sulfate ions. Acta Crystallogr 58, 744 750.
-
(2002)
Acta Crystallogr
, vol.58
, pp. 744-750
-
-
Polyakov, K.M.1
Lebedev, A.A.2
Okorokov, A.L.3
Panov, K.I.4
Schulga, A.A.5
Pavlovsky, A.G.6
Karpeisky, M.Y.7
Dodson, G.G.8
-
18
-
-
0029920488
-
Site-directed mutagenesis of the base recognition loop of ribonuclease from Bacillus intermedius (binase)
-
Okorokov AL, Panov KI, Kolbanovskaya EYu, Karpeisky MYa, Polyakov KM, Wilkinson AJ Dodson GG (1996) Site-directed mutagenesis of the base recognition loop of ribonuclease from Bacillus intermedius (binase). FEBS Lett 384, 143 146.
-
(1996)
FEBS Lett
, vol.384
, pp. 143-146
-
-
Okorokov, A.L.1
Panov, K.I.2
Eyu, K.3
Mya, K.4
Polyakov, K.M.5
Wilkinson, A.J.6
Dodson, G.G.7
-
19
-
-
28844491827
-
Molecular basis for nucleotide-binding specificity: Role of the exocyclic amino group 'N2' in recognition by a guanylyl-ribonuclease
-
Schrift GL, Waldron TT, Timmons MA, Ramaswamy S, Kearney WR Murphy KP (2006) Molecular basis for nucleotide-binding specificity: role of the exocyclic amino group 'N2' in recognition by a guanylyl-ribonuclease. J Mol Biol 355, 72 84.
-
(2006)
J Mol Biol
, vol.355
, pp. 72-84
-
-
Schrift, G.L.1
Waldron, T.T.2
Timmons, M.A.3
Ramaswamy, S.4
Kearney, W.R.5
Murphy, K.P.6
-
20
-
-
0014459676
-
Biosyntéza extracelulárnej ribonukleázy a nešpecifickej fosfodiesterázy kmewňom Strptomyces aureofaciens
-
Zelinková E Zelinka J (1969) Biosyntéza extracelulárnej ribonukleázy a nešpecifickej fosfodiesterázy kmewňom Strptomyces aureofaciens. Biologia 24, 459 463.
-
(1969)
Biologia
, vol.24
, pp. 459-463
-
-
Zelinková, E.1
Zelinka, J.2
-
21
-
-
0026783393
-
Cloning and sequencing of the gene encoding a ribonuclease from Streptomyces aureofaciens CCM3239
-
Homerova D, Holländerova Z, Kormanec J Sevcik J (1992) Cloning and sequencing of the gene encoding a ribonuclease from Streptomyces aureofaciens CCM3239. Gene 119, 147 148.
-
(1992)
Gene
, vol.119
, pp. 147-148
-
-
Homerova, D.1
Holländerova, Z.2
Kormanec, J.3
Sevcik, J.4
-
22
-
-
0032169596
-
Recognition of RNase Sa by the inhibitor barstar: Structure of the complex at 1.7 A resolution
-
Sevcik J, Urbanikova L, Dauter Z Wilson KS (1998) Recognition of RNase Sa by the inhibitor barstar: structure of the complex at 1.7 A resolution. Acta Crystallogr 54, 954 963.
-
(1998)
Acta Crystallogr
, vol.54
, pp. 954-963
-
-
Sevcik, J.1
Urbanikova, L.2
Dauter, Z.3
Wilson, K.S.4
-
23
-
-
0000232426
-
Complex of ribonuclease from Streptomyces aureofaciens with 2′-GMP at 1.7 A resolution
-
Sevcik J, Hill CP, Dauter Z Wilson KS (1993) Complex of ribonuclease from Streptomyces aureofaciens with 2′-GMP at 1.7 A resolution. Acta Crystallogr 49, 257 271.
-
(1993)
Acta Crystallogr
, vol.49
, pp. 257-271
-
-
Sevcik, J.1
Hill, C.P.2
Dauter, Z.3
Wilson, K.S.4
-
24
-
-
0027293405
-
Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate
-
Sevcik J, Zegers I, Wyns L, Dauter Z Wilson KS (1993) Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate. Eur J Biochem/FEBS 216, 301 305.
-
(1993)
Eur J Biochem/FEBS
, vol.216
, pp. 301-305
-
-
Sevcik, J.1
Zegers, I.2
Wyns, L.3
Dauter, Z.4
Wilson, K.S.5
-
25
-
-
13144249171
-
Conformational stability and thermodynamics of folding of ribonucleases Sa, Sa2 and Sa3
-
Pace CN, Hebert EJ, Shaw KL, Schell D, Both V, Krajcikova D, Sevcik J, Wilson KS, Dauter Z, Hartley RW et al. (1998) Conformational stability and thermodynamics of folding of ribonucleases Sa, Sa2 and Sa3. J Mol Biol 279, 271 286.
-
(1998)
J Mol Biol
, vol.279
, pp. 271-286
-
-
Pace, C.N.1
Hebert, E.J.2
Shaw, K.L.3
Schell, D.4
Both, V.5
Krajcikova, D.6
Sevcik, J.7
Wilson, K.S.8
Dauter, Z.9
Hartley, R.W.10
-
26
-
-
0035860350
-
Tyrosine hydrogen bonds make a large contribution to protein stability
-
Pace CN, Horn G, Hebert EJ, Bechert J, Shaw K, Urbanikova L, Scholtz JM Sevcik J (2001) Tyrosine hydrogen bonds make a large contribution to protein stability. J Mol Biol 312, 393 404.
-
(2001)
J Mol Biol
, vol.312
, pp. 393-404
-
-
Pace, C.N.1
Horn, G.2
Hebert, E.J.3
Bechert, J.4
Shaw, K.5
Urbanikova, L.6
Scholtz, J.M.7
Sevcik, J.8
-
27
-
-
10044295190
-
Contribution of single tryptophan residues to the fluorescence and stability of ribonuclease Sa
-
Alston RW, Urbanikova L, Sevcik J, Lasagna M, Reinhart GD, Scholtz JM Pace CN (2004) Contribution of single tryptophan residues to the fluorescence and stability of ribonuclease Sa. Biophys J 87, 4036 4047.
-
(2004)
Biophys J
, vol.87
, pp. 4036-4047
-
-
Alston, R.W.1
Urbanikova, L.2
Sevcik, J.3
Lasagna, M.4
Reinhart, G.D.5
Scholtz, J.M.6
Pace, C.N.7
-
28
-
-
19644364347
-
Ribonuclease Sa conformational stability studied by NMR-monitored hydrogen exchange
-
Laurents DV, Scholtz JM, Rico M, Pace CN Bruix M (2005) Ribonuclease Sa conformational stability studied by NMR-monitored hydrogen exchange. Biochemistry 44, 7644 7655.
-
(2005)
Biochemistry
, vol.44
, pp. 7644-7655
-
-
Laurents, D.V.1
Scholtz, J.M.2
Rico, M.3
Pace, C.N.4
Bruix, M.5
-
29
-
-
0035882568
-
Solution structure and dynamics of ribonuclease Sa
-
Laurents D, Perez-Canadillas JM, Santoro J, Rico M, Schell D, Pace CN Bruix M (2001) Solution structure and dynamics of ribonuclease Sa. Proteins 44, 200 211.
-
(2001)
Proteins
, vol.44
, pp. 200-211
-
-
Laurents, D.1
Perez-Canadillas, J.M.2
Santoro, J.3
Rico, M.4
Schell, D.5
Pace, C.N.6
Bruix, M.7
-
30
-
-
0036784623
-
Changing the net charge from negative to positive makes ribonuclease Sa cytotoxic
-
Ilinskaya ON, Dreyer F, Mitkevich VA, Shaw KL, Pace CN Makarov AA (2002) Changing the net charge from negative to positive makes ribonuclease Sa cytotoxic. Protein Sci 11, 2522 2525.
-
(2002)
Protein Sci
, vol.11
, pp. 2522-2525
-
-
Ilinskaya, O.N.1
Dreyer, F.2
Mitkevich, V.A.3
Shaw, K.L.4
Pace, C.N.5
Makarov, A.A.6
-
31
-
-
0141746380
-
Contribution of active site residues to the activity and thermal stability of ribonuclease Sa
-
Yakovlev GI, Mitkevich VA, Shaw KL, Trevino S, Newsom S, Pace CN Makarov AA (2003) Contribution of active site residues to the activity and thermal stability of ribonuclease Sa. Protein Sci 12, 2367 2373.
-
(2003)
Protein Sci
, vol.12
, pp. 2367-2373
-
-
Yakovlev, G.I.1
Mitkevich, V.A.2
Shaw, K.L.3
Trevino, S.4
Newsom, S.5
Pace, C.N.6
Makarov, A.A.7
-
32
-
-
16644374645
-
Crystal structure reveals two alternative conformations in the active site of ribonuclease Sa2
-
Sevcik J, Dauter Z Wilson KS (2004) Crystal structure reveals two alternative conformations in the active site of ribonuclease Sa2. Acta Crystallogr 60, 1198 1204.
-
(2004)
Acta Crystallogr
, vol.60
, pp. 1198-1204
-
-
Sevcik, J.1
Dauter, Z.2
Wilson, K.S.3
-
33
-
-
0031281857
-
Purification of ribonucleases Sa, Sa2, and Sa3 after expression in Escherichia coli
-
Hebert EJ, Grimsley GR, Hartley RW, Horn G, Schell D, Garcia S, Both V, Sevcik J Pace CN (1997) Purification of ribonucleases Sa, Sa2, and Sa3 after expression in Escherichia coli. Protein Express Purif 11, 162 168.
-
(1997)
Protein Express Purif
, vol.11
, pp. 162-168
-
-
Hebert, E.J.1
Grimsley, G.R.2
Hartley, R.W.3
Horn, G.4
Schell, D.5
Garcia, S.6
Both, V.7
Sevcik, J.8
Pace, C.N.9
-
34
-
-
0347635412
-
Cytotoxicity of RNases is increased by cationization and counteracted by K(Ca) channels
-
Ilinskaya ON, Koschinski A, Mitkevich VA, Repp H, Dreyer F, Pace CN Makarov AA (2004) Cytotoxicity of RNases is increased by cationization and counteracted by K(Ca) channels. Biochem Biophys Res Commun 314, 550 554.
-
(2004)
Biochem Biophys Res Commun
, vol.314
, pp. 550-554
-
-
Ilinskaya, O.N.1
Koschinski, A.2
Mitkevich, V.A.3
Repp, H.4
Dreyer, F.5
Pace, C.N.6
Makarov, A.A.7
-
35
-
-
0000560808
-
Molrep: An automated program for molecular replacement
-
Vagin A Teplyakov A (1997) Molrep: an automated program for molecular replacement. J Appl Crystallogr 30, 1022 1035.
-
(1997)
J Appl Crystallogr
, vol.30
, pp. 1022-1035
-
-
Vagin, A.1
Teplyakov, A.2
-
36
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov GN, Vagin AA Dodson EJ (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr 53, 240 255.
-
(1997)
Acta Crystallogr
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
37
-
-
0028287089
-
Subsite binding in an RNase: Structure of a barnase-tetranucleotide complex at 1.76-A resolution
-
Buckle AM Fersht AR (1994) Subsite binding in an RNase: structure of a barnase-tetranucleotide complex at 1.76-A resolution. Biochemistry 33, 1644 1653.
-
(1994)
Biochemistry
, vol.33
, pp. 1644-1653
-
-
Buckle, A.M.1
Fersht, A.R.2
-
38
-
-
0036024513
-
Atomic resolution data reveal flexibility in the structure of RNase Sa
-
Sevcik J, Lamzin VS, Dauter Z Wilson KS (2002) Atomic resolution data reveal flexibility in the structure of RNase Sa. Acta Crystallogr 58, 1307 1313.
-
(2002)
Acta Crystallogr
, vol.58
, pp. 1307-1313
-
-
Sevcik, J.1
Lamzin, V.S.2
Dauter, Z.3
Wilson, K.S.4
-
39
-
-
0026723477
-
Effect of active site residues in barnase on activity and stability
-
Meiering EM, Serrano L Fersht AR (1992) Effect of active site residues in barnase on activity and stability. J Mol Biol 225, 585 589.
-
(1992)
J Mol Biol
, vol.225
, pp. 585-589
-
-
Meiering, E.M.1
Serrano, L.2
Fersht, A.R.3
-
40
-
-
0031979619
-
Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography
-
Zegers I, Loris R, Dehollander G, Fattah Haikal A, Poortmans F, Steyaert J Wyns L (1998) Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography. Nat Struct Biol 5, 280 283.
-
(1998)
Nat Struct Biol
, vol.5
, pp. 280-283
-
-
Zegers, I.1
Loris, R.2
Dehollander, G.3
Fattah Haikal, A.4
Poortmans, F.5
Steyaert, J.6
Wyns, L.7
-
41
-
-
0026751045
-
Barnase has subsites that give rise to large rate enhancements
-
Day AG, Parsonage D, Ebel S, Brown T Fersht AR (1992) Barnase has subsites that give rise to large rate enhancements. Biochemistry 31, 6390 6395.
-
(1992)
Biochemistry
, vol.31
, pp. 6390-6395
-
-
Day, A.G.1
Parsonage, D.2
Ebel, S.3
Brown, T.4
Fersht, A.R.5
-
42
-
-
0025947177
-
Subsite interactions of ribonuclease T1: Asn36 and Asn98 accelerate GpN transesterification through interactions with the leaving nucleoside N
-
Steyaert J, Haikal AF, Wyns L Stanssens P (1991) Subsite interactions of ribonuclease T1: Asn36 and Asn98 accelerate GpN transesterification through interactions with the leaving nucleoside N. Biochemistry 30, 8666 8670.
-
(1991)
Biochemistry
, vol.30
, pp. 8666-8670
-
-
Steyaert, J.1
Haikal, A.F.2
Wyns, L.3
Stanssens, P.4
-
43
-
-
0032542062
-
Contribution of a conserved asparagine to the conformational stability of ribonucleases Sa, Ba, and T1
-
DOI 10.1021/bi9815243
-
Hebert EJ, Giletto A, Sevcik J, Urbanikova L, Wilson KS, Dauter Z Pace CN (1998) Contribution of a conserved asparagine to the conformational stability of ribonucleases Sa, Ba, and T1. Biochemistry 37, 16192 16200. (Pubitemid 28536255)
-
(1998)
Biochemistry
, vol.37
, Issue.46
, pp. 16192-16200
-
-
Hebert, E.J.1
Giletto, A.2
Sevcik, J.3
Urbanikova, L.4
Wilson, K.S.5
Dauter, Z.6
Pace, C.N.7
-
44
-
-
19044396470
-
Crystallization and preliminary X-ray analysis of complex RNase Sa′ with 3′-GMP and 2′,3′-GCPT
-
Hlinková V, Urbániková Ľ ševč ík J (2002) Crystallization and preliminary X-ray analysis of complex RNase Sa′ with 3′-GMP and 2′,3′-GCPT. Biologia 57, 823 826.
-
(2002)
Biologia
, vol.57
, pp. 823-826
-
-
Hlinková, V.1
Ľ, U.2
Ševčík, J.3
-
45
-
-
0038116629
-
Choice of data-collection parameters based on statistic modelling
-
Popov AN Bourenkov GP (2003) Choice of data-collection parameters based on statistic modelling. Acta Crystallogr 59, 1145 1153.
-
(2003)
Acta Crystallogr
, vol.59
, pp. 1145-1153
-
-
Popov, A.N.1
Bourenkov, G.P.2
-
46
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski ZM Minor W (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276, 307 326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.M.1
Minor, W.2
-
47
-
-
0001897686
-
Assessment of phase accuracy by cross validation: The free R value. Methods and applications
-
Brunger AT (1993) Assessment of phase accuracy by cross validation: the free R value. Methods and applications. Acta Crystallogr 49, 24 36.
-
(1993)
Acta Crystallogr
, vol.49
, pp. 24-36
-
-
Brunger, A.T.1
-
48
-
-
0030809260
-
WARP: Improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models
-
Perrakis A, Sixma TK, Wilson KS Lamzin VS (1997) wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models. Acta Crystallogr 53, 448 455.
-
(1997)
Acta Crystallogr
, vol.53
, pp. 448-455
-
-
Perrakis, A.1
Sixma, T.K.2
Wilson, K.S.3
Lamzin, V.S.4
-
49
-
-
0000078168
-
O: A macromolecular modeling environment
-
In. Bugg, C. Ealick, S. eds. pp. Springer-Verlag Press. New York, NY.
-
Jones TA, Bergdoll M Kjeldgaard M (1990) O: a macromolecular modeling environment. In Crystallographic and Modeling Methods in Molecular Design (Bugg C Ealick S, eds pp 189 195. Springer-Verlag Press, New York, NY.
-
(1990)
Crystallographic and Modeling Methods in Molecular Design
, pp. 189-195
-
-
Jones, T.A.1
Bergdoll, M.2
Kjeldgaard, M.3
-
50
-
-
0032790081
-
XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density
-
McRee DE (1999) XtalView/Xfit - a versatile program for manipulating atomic coordinates and electron density. J Struct Biol 125, 156 165.
-
(1999)
J Struct Biol
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
51
-
-
0027169515
-
Main-chain bond lengths and bond angles in protein structures
-
Laskowski RA, Moss DS Thornton JM (1993) Main-chain bond lengths and bond angles in protein structures. J Mol Biol 231, 1049 1067.
-
(1993)
J Mol Biol
, vol.231
, pp. 1049-1067
-
-
Laskowski, R.A.1
Moss, D.S.2
Thornton, J.M.3
-
52
-
-
2442456104
-
A method for simultaneous alignment of multiple protein structures
-
Shatsky M, Nussinov R Wolfson HJ (2004) A method for simultaneous alignment of multiple protein structures. Proteins 56, 143 156.
-
(2004)
Proteins
, vol.56
, pp. 143-156
-
-
Shatsky, M.1
Nussinov, R.2
Wolfson, H.J.3
-
54
-
-
57049121004
-
-
Schrödinger, LCC. Schrödinger. LCC, New York, NY.
-
Schrödinger, LCC (2005) Glide, version 4.0. Schrödinger, LCC, New York, NY.
-
(2005)
Glide, Version 4.0.
-
-
-
55
-
-
33845758933
-
-
Schrödinger, LCC. Schrödinger. LCC, New York, NY.
-
Schrödinger, LCC (2006) Maestro, version 7.5. Schrödinger, LCC, New York, NY.
-
(2006)
Maestro, Version 7.5.
-
-
-
56
-
-
0035009229
-
The effect of net charge on the solubility, activity and stability of ribonuclease Sa
-
Shaw KL, Grimsley GR, Yakovlev GI, Makarov AA Pace CN (2001) The effect of net charge on the solubility, activity and stability of ribonuclease Sa. Protein Sci 10, 1206 1215.
-
(2001)
Protein Sci
, vol.10
, pp. 1206-1215
-
-
Shaw, K.L.1
Grimsley, G.R.2
Yakovlev, G.I.3
Makarov, A.A.4
Pace, C.N.5
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