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Volumn 19, Issue 8, 2009, Pages 1393-1403

Domain shuffling and the evolution of vertebrates

Author keywords

[No Author keywords available]

Indexed keywords

AGGRECAN; AGRIN; AMYLOID PRECURSOR PROTEIN; COCHLIN; COMPLEMENT COMPONENT C7; CONNEXIN 43; DIACYLGLYCEROL KINASE; EPIDERMAL GROWTH FACTOR; GAP JUNCTION PROTEIN; HERMES ANTIGEN; LECTIN; OCCLUDIN; SOMATOMEDIN BINDING PROTEIN 4; SURFACTANT PROTEIN D; TENASCIN; THYROID PEROXIDASE; TRANSCRIPTION FACTOR CDX2; VON WILLEBRAND FACTOR;

EID: 68149147505     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.087072.108     Document Type: Article
Times cited : (71)

References (45)
  • 3
    • 34247874698 scopus 로고    scopus 로고
    • Current topics in genome evolution: Molecular mechanisms of new gene formation
    • Babushok DV, Ostertag EM, Kazazian HH Jr. 2007. Current topics in genome evolution: Molecular mechanisms of new gene formation. Cell Mol Life Sci 64: 542-554.
    • (2007) Cell Mol Life Sci , vol.64 , pp. 542-554
    • Babushok, D.V.1    Ostertag, E.M.2    Kazazian Jr., H.H.3
  • 4
    • 0037403968 scopus 로고    scopus 로고
    • Neuromuscular synapses mediate motor axon branching and motoneuron survival during the embryonic period of programmed cell death
    • DOI 10.1016/S0012-1606(03)00056-3
    • Banks G, Choy P, Lavidis N, Noakes P. 2003. Neuromuscular synapses mediate motor axon branching and motoneuron survival during the embryonic period of programmed cell death. Dev Biol 257: 71-84. (Pubitemid 36442694)
    • (2003) Developmental Biology , vol.257 , Issue.1 , pp. 71-84
    • Banks, G.B.1    Choy, P.T.2    Lavidis, N.A.3    Noakes, P.G.4
  • 10
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • Eddy SR. 1998. Profile hidden Markov models. Bioinformatics 14: 755-763.
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1
  • 11
    • 34548487255 scopus 로고    scopus 로고
    • Quantification of the Elevated Rate of Domain Rearrangements in Metazoa
    • DOI 10.1016/j.jmb.2007.06.022, PII S0022283607008170
    • Ekman D, Bjorkund A, Elofsson A. 2007. Quantification of the elevated rate of domain rearrangements in Metazoa. J Mol Biol 372: 1337-1348. (Pubitemid 47374714)
    • (2007) Journal of Molecular Biology , vol.372 , Issue.5 , pp. 1337-1348
    • Ekman, D.1    Bjorklund, A.K.2    Elofsson, A.3
  • 13
    • 0037148774 scopus 로고    scopus 로고
    • Evolution of a transcriptional repression domain in an insect Hox protein
    • DOI 10.1038/nature717
    • Galant R, Carroll SB. 2002. Evolution of a transcriptional repression domain in an insect Hox protein. Nature 415: 910-913. (Pubitemid 34174752)
    • (2002) Nature , vol.415 , Issue.6874 , pp. 910-913
    • Galant, R.1    Carroll, S.B.2
  • 14
    • 0141652959 scopus 로고    scopus 로고
    • Mouse SCO-spondin, a gene of the thrombospondin type 1 repeat (TSR) superfamily expressed in the brain
    • DOI 10.1016/S0378-1119(03)00622-X
    • Goncxalves-Mendes N, Simon-Chazottes D, Creveaux I, Meiniel A, Guénet J-L, Meiniel R. 2003. Mouse SCO-spondin, a gene of the thrombospondin type 1 repeat (TSR) superfamily expressed in the brain. Gene 312: 263-270. (Pubitemid 37338131)
    • (2003) Gene , vol.312 , Issue.1-2 , pp. 263-270
    • Goncalves-Mendes, N.1    Simon-Chazottes, D.2    Creveaux, I.3    Meiniel, A.4    Guenet, J.-L.5    Meiniel, R.6
  • 15
    • 17544367678 scopus 로고    scopus 로고
    • Convergent evolution of domain architectures (is rare)
    • DOI 10.1093/bioinformatics/bti204
    • Gough J. 2005. Convergent evolution of domain architectures (is rare). Bioinformatics 21: 1464-1471. (Pubitemid 40552751)
    • (2005) Bioinformatics , vol.21 , Issue.8 , pp. 1464-1471
    • Gough, J.1
  • 16
    • 0028598861 scopus 로고
    • Gene duplications and the origins of vertebrate development
    • Holland PW, Garcia-Fernandez J, Williams NA, Sidow A. 1994. Gene duplications and origins of vertebrate development. Development 1994 (Suppl.): 125-133. (Pubitemid 124006431)
    • (1994) Development , vol.120 , Issue.4 SUPPL.
    • Holland, P.W.H.1    Garcia-Fernandez, J.2    Williams, N.A.3    Sidow, A.4
  • 19
    • 0036851263 scopus 로고    scopus 로고
    • Signatures of domain shuffling in the human genome
    • DOI 10.1101/gr.520702
    • Kaessmann H, Zollner S, Nekrutenko A, Li W. 2002. Signatures of domain shuffling in the human genome. Genome Res 12: 1642-1650. (Pubitemid 35363668)
    • (2002) Genome Research , vol.12 , Issue.11 , pp. 1642-1650
    • Kaessmann, H.1    Zollner, S.2    Nekrutenko, A.3    Li, W.-H.4
  • 21
    • 33845288651 scopus 로고    scopus 로고
    • Stabilin-1, a homeostatic scavenger receptor with multiple functions
    • DOI 10.1111/j.1582-4934.2006.tb00425.x
    • Kzhyshkowska J, Gratchev A, Goerdt S. 2006. Stabilin-1, a homeostatic scavenger receptor with multiple functions. J Cell Mol Med 10: 635-649. (Pubitemid 44874274)
    • (2006) Journal of Cellular and Molecular Medicine , vol.10 , Issue.3 , pp. 635-649
    • Kzhyshkowska, J.1    Gratchev, A.2    Goerdt, S.3
  • 22
    • 0032472437 scopus 로고    scopus 로고
    • 2+-independent insulin exocytosis induced by α-latrotoxin requires latrophilin, a G protein-coupled receptor
    • DOI 10.1093/emboj/17.3.648
    • Lang J, Ushkaryov Y, Grasso A, Wollheim CB. 1998. Ca2+-independent insulin exocytosis induced by α-latrotoxin requires latrophilin, a G protein-coupled receptor. EMBO J 17: 648-657. (Pubitemid 28062044)
    • (1998) EMBO Journal , vol.17 , Issue.3 , pp. 648-657
    • Lang, J.1    Ushkaryov, Y.2    Grasso, A.3    Wollheim, C.B.4
  • 24
    • 4143069189 scopus 로고    scopus 로고
    • Protein domains correlate strongly with exons in multiple eukaryotic genomes: Evidence of exon shuffling?
    • Liu M, Grigoriev A. 2004. Protein domains correlate strongly with exons in multiple eukaryotic genomes: Evidence of exon shuffling? Trends Genet 20: 399-403.
    • (2004) Trends Genet , vol.20 , pp. 399-403
    • Liu, M.1    Grigoriev, A.2
  • 25
    • 0033567355 scopus 로고    scopus 로고
    • Ascidian homologs of mammalian thyroid peroxidase genes are expressed in the thyroid-equivalent region of the endostyle
    • DOI 10.1002/(SICI)1097-010X(19990815)285:2<158::AID-JEZ8>3.0.CO;2-0
    • Ogasawara M, Lauro RD, Satoh N. 1999. Ascidian homologs of mammalian thyroid peroxidase genes are expressed in the thyroid-equivalent region of the endostyle. J Exp Zool 285: 158-169. (Pubitemid 29375326)
    • (1999) Journal of Experimental Zoology , vol.285 , Issue.2 , pp. 158-169
    • Ogasawaka, M.1    Di Lauro, R.2    Satoh, N.3
  • 27
    • 0032885169 scopus 로고    scopus 로고
    • Genome evolution and the evolution of exon-shuffling - A review
    • Patthy L. 1999. Genome evolution and the evolution of exon-shuffling - A review. Gene 238: 103-114.
    • (1999) Gene , vol.238 , pp. 103-114
    • Patthy, L.1
  • 28
    • 0038306145 scopus 로고    scopus 로고
    • Modular assembly of genes and the evolution of new functions
    • DOI 10.1023/A:1024182432483
    • Patthy L. 2003. Modular assembly of genes and the evolution of new functions. Genetica 118: 217-231. (Pubitemid 36821051)
    • (2003) Genetica , vol.118 , Issue.2-3 , pp. 217-231
    • Patthy, L.1
  • 31
    • 0037488241 scopus 로고    scopus 로고
    • Subcellular localisation, secretion, and post-translational processing of normal cochlin, and of mutants causing the sensorineural deafness and vestibular disorder, DFNA9
    • Robertson N, Hamaker S, Patriub V, Aster J, Morton C. 2006. Subcellular localisation, secretion, and post-translational processing of normal cochlin, and of mutants causing the sensorineural deafness and vestibular disorder, DFNA9. J Med Genet 40: 479-486. (Pubitemid 36843069)
    • (2003) Journal of Medical Genetics , vol.40 , Issue.7 , pp. 479-486
    • Robertson, N.G.1    Hamaker, S.A.2    Patriub, V.3    Aster, J.C.4    Morton, C.C.5
  • 33
    • 2942722817 scopus 로고    scopus 로고
    • MARVEL: A conserved domain involved in membrane apposition events
    • DOI 10.1016/S0968-0004(02)02229-6, PII S0968000402022296
    • Sánchez-Pulido L, Martín-Belmonte F, Valencia A, Alonso MA. 2002. MARVEL: A conserved domain involved in membrane apposition events. Trends Biochem Sci 27: 599-601. (Pubitemid 35435304)
    • (2002) Trends in Biochemical Sciences , vol.27 , Issue.12 , pp. 599-601
    • Sanchez-Pulido, L.1    Martin-Belmonte, F.2    Valencia, A.3    Alonso, M.A.4
  • 34
    • 0037379619 scopus 로고    scopus 로고
    • The ascidian tadpole larva: Comparative molecular development and genomics
    • DOI 10.1038/nrg1042
    • Satoh N. 2003. The ascidian tadpole larva: Comparative molecular development and genomics. Nat Rev Genet 4: 285-295. (Pubitemid 36389533)
    • (2003) Nature Reviews Genetics , vol.4 , Issue.4 , pp. 285-295
    • Satoh, N.1
  • 36
    • 0037626990 scopus 로고    scopus 로고
    • Large scale EST analyses in Ciona intestinalis. Its application as Northern blot analyses
    • DOI 10.1007/s00427-003-0327-7
    • Satou Y, Kawashima T, Kohara Y, Satoh N. 2003. Large scale EST analyses in Ciona intestinalis, its application as Northern blot analyses. Dev Genes Evol 213: 314-318. (Pubitemid 36833700)
    • (2003) Development Genes and Evolution , vol.213 , Issue.5-6 , pp. 314-318
    • Satou, Y.1    Kawashima, T.2    Kohara, Y.3    Satoh, N.4
  • 37
    • 25444448272 scopus 로고    scopus 로고
    • An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics
    • DOI 10.2108/zsj.22.837
    • Satou Y, Kawashima T, Shoguchi E, Nakayama A, Satoh N. 2005. An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics. Zoolog Sci 22: 837-843. (Pubitemid 41360613)
    • (2005) Zoological Science , vol.22 , Issue.8 , pp. 837-843
    • Satou, Y.1    Kawashima, T.2    Shoguchi, E.3    Nakayama, A.4    Satoh, N.5
  • 38
    • 33750995860 scopus 로고    scopus 로고
    • The genome of the sea urchin Strongylocentrotus purpuratus
    • Sea Urchin Genome Sequencing Consortium.
    • Sea Urchin Genome Sequencing Consortium. 2006. The genome of the sea urchin Strongylocentrotus purpuratus. Science 314: 941-952.
    • (2006) Science , vol.314 , pp. 941-952
  • 39
    • 0032920440 scopus 로고    scopus 로고
    • Tenascin-C expression in the trunk of wild-type, cyclops and floating head zebrafish embryos
    • DOI 10.1016/S0361-9230(98)00149-X, PII S036192309800149X
    • Tongiorgi E. 1999. Tenascin-C expression in the trunk of wild-type, cyclops and floating head zebrafish embryos. Brain Res Bull 48: 79-88. (Pubitemid 29165991)
    • (1999) Brain Research Bulletin , vol.48 , Issue.1 , pp. 79-88
    • Tongiorgi, E.1
  • 40
    • 0036775227 scopus 로고    scopus 로고
    • Characterization of human aggrecanase 2 (ADAM-TS5): Substrate specificity studies and comparison with aggrecanase 1 (ADAM-TS4)
    • Tortorella MD, Liu R-Q, Burn T, Newton RC, Arner E. 2002. Characterization of human aggrecanase 2 (ADAM-TS5): Substrate specificity studies and comparison with aggrecanase 1 (ADAM-TS4). Matrix Biol 21: 499-511.
    • (2002) Matrix Biol , vol.21 , pp. 499-511
    • Tortorella, M.D.1    Liu, R.-Q.2    Burn, T.3    Newton, R.C.4    Arner, E.5
  • 41
    • 0027992249 scopus 로고
    • Molecular cloning and analysis of the protein modules of aggrecans
    • Upholt WB, Chandrasekaran L, Tanzer ML. 1994. Molecular cloning and analysis of the protein modules of aggrecans. EXS 70: 37-52.
    • (1994) EXS , vol.70 , pp. 37-52
    • Upholt, W.B.1    Chandrasekaran, L.2    Tanzer, M.L.3
  • 42
    • 0029040078 scopus 로고
    • Structure of the human aggrecan gene: Exon-intron organization and association with the protein domains
    • Valhmu WB, Palmer GD, Rivers PA, Ebara S, Cheng JF, Fischer S, Ratcliffe A. 1995. Structure of the human aggrecan gene: Exon-intron organization and association with the protein domains. Biochem J 309: 535-542.
    • (1995) Biochem J , vol.309 , pp. 535-542
    • Valhmu, W.B.1    Palmer, G.D.2    Rivers, P.A.3    Ebara, S.4    Cheng, J.F.5    Fischer, S.6    Ratcliffe, A.7
  • 44
    • 25144449591 scopus 로고    scopus 로고
    • Signs of ancient and modern exon-shuffling are correlated to the distributuon of ancient and modern domains along proteins
    • Vibranovski MD, NJ Sakabe, de Oliveira RS, de Souza SJ. 2005. Signs of ancient and modern exon-shuffling are correlated to the distributuon of ancient and modern domains along proteins. J Mol Evol 61: 341-350.
    • (2005) J Mol Evol , vol.61 , pp. 341-350
    • Vibranovski, M.D.1    Sakabe, N.J.2    De Oliveira, R.S.3    De Souza, S.J.4
  • 45
    • 0032931819 scopus 로고    scopus 로고
    • Mice lacking link protein develop dwarfism and craniofacial abnormalities
    • DOI 10.1038/6016
    • Watanabe H, Yamada Y. 1999. Mice lacking link protein develop dwarfism and craniofacial abnormalities. Nat Genet 21: 225-229. (Pubitemid 29070373)
    • (1999) Nature Genetics , vol.21 , Issue.2 , pp. 225-229
    • Watanabe, H.1    Yamada, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.