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Volumn 36, Issue 7, 2009, Pages 1767-1778

DNA profiling by array comparative genomic hybridization (CGH) of peripheral blood mononuclear cells (PBMC) and tumor tissue cell in non-small cell lung cancer (NSCLC)

Author keywords

Array CGH; Copy number alteration; Non small cell lung cancer; Peripheral blood mononuclear cell

Indexed keywords

ADULT; AGED; ARTICLE; CANCER PATIENT; CHROMOSOME 3Q; CHROMOSOME 5Q; CHROMOSOME ARM; CHROMOSOME DELETION; CHROMOSOME VARIANT; CLINICAL ARTICLE; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; DNA FINGERPRINTING; DNA ISOLATION; EGR1 GENE; FAMILY HISTORY; FEMALE; FGF8 GENE; GENE AMPLIFICATION; GENETIC PREDISPOSITION; HUMAN; HUMAN CELL; HUMAN TISSUE; JMJD1B GENE; LUNG NON SMALL CELL CANCER; MALE; NTRK1 GENE; ONCOGENE; PERIPHERAL BLOOD MONONUCLEAR CELL; PROGNOSIS; TGFBETA1 GENE; THPO GENE; TP53 GENE; TUMOR CELL;

EID: 68149125221     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-008-9380-7     Document Type: Article
Times cited : (16)

References (61)
  • 1
    • 0027138852 scopus 로고
    • Estimates of the worldwide mortality from eighteen major cancers in 1985. Implications for prevention and projections of future burden
    • DOI 10.1002/ijc.2910550604
    • P Pisani DM Parkin J Ferlay (1993) Estimates of the worldwide mortality from eighteen major cancers in 1985. Implications for prevention and projections of future burden Int J Cancer 55 891 903 10.1002/ijc.2910550604 (Pubitemid 24005331)
    • (1993) International Journal of Cancer , vol.55 , Issue.6 , pp. 891-903
    • Pisani, P.1    Parkin, D.M.2    Ferlay, J.3
  • 2
    • 33750603100 scopus 로고    scopus 로고
    • Changing epidemiology of small-cell lung cancer in the United States over the last 30 years: Analysis of the surveillance, epidemiologic, and end results database
    • DOI 10.1200/JCO.2005.04.4859
    • R Govindan N Page D Morgensztern 2006 Changing epidemiology of small-cell lung cancer in the United States over the last 30 years: analysis of the surveillance, epidemiologic, and end results database J Clin Oncol 24 4539 4544 10.1200/JCO.2005.04.4859 (Pubitemid 46630948)
    • (2006) Journal of Clinical Oncology , vol.24 , Issue.28 , pp. 4539-4544
    • Govindan, R.1    Page, N.2    Morgensztern, D.3    Read, W.4    Tierney, R.5    Vlahiotis, A.6    Spitznagel, E.L.7    Piccirillo, J.8
  • 4
    • 0031972522 scopus 로고    scopus 로고
    • Cancer cells exhibit a mutator phenotype
    • 10.1016/S0065-230X(08)60699-5
    • LA Loeb 1998 Cancer cells exhibit a mutator phenotype Adv Cancer Res 72 25 56 10.1016/S0065-230X(08)60699-5
    • (1998) Adv Cancer Res , vol.72 , pp. 25-56
    • Loeb, L.A.1
  • 6
    • 0036804230 scopus 로고    scopus 로고
    • Comparative genomic hybridization analysis detected frequent overrepresentation of chromosome 3q in squamous cell carcinoma of the lung
    • DOI 10.1016/S0169-5002(02)00151-4, PII S0169500202001514
    • M Chujo T Noguchi T Miura 2002 Comparative genomic hybridization analysis detected frequent overrepresentation of chromosome 3q in squamous cell carcinoma of the lung Lung Cancer 38 23 29 10.1016/S0169-5002(02)00151-4 (Pubitemid 35303356)
    • (2002) Lung Cancer , vol.38 , Issue.1 , pp. 23-29
    • Chujo, M.1    Noguchi, T.2    Miura, T.3    Arinaga, M.4    Uchida, Y.5    Tagawa, Y.6
  • 7
    • 34247891719 scopus 로고    scopus 로고
    • A translational view of the molecular pathogenesis of lung cancer
    • M Sato DS Shames AF Gazdar 2007 A translational view of the molecular pathogenesis of lung cancer J Thorac Oncol 2 327 343
    • (2007) J Thorac Oncol , vol.2 , pp. 327-343
    • Sato, M.1    Shames, D.S.2    Gazdar, A.F.3
  • 13
    • 0037905690 scopus 로고    scopus 로고
    • Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors
    • JA Veltman J Fridlyand S Pejavar 2003 Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors Cancer Res 63 2872 2880
    • (2003) Cancer Res , vol.63 , pp. 2872-2880
    • Veltman, J.A.1    Fridlyand, J.2    Pejavar, S.3
  • 15
    • 20144368274 scopus 로고    scopus 로고
    • High-resolution genome-wide mapping of genetic alterations in human glial brain tumors
    • DOI 10.1158/0008-5472.CAN-04-4229
    • M Bredel C Bredel D Juric 2005 High-resolution genome-wide mapping of genetic alterations in human glial brain tumors Cancer Res 65 4088 4096 10.1158/0008-5472.CAN-04-4229 (Pubitemid 40775645)
    • (2005) Cancer Research , vol.65 , Issue.10 , pp. 4088-4096
    • Bredel, M.1    Bredel, C.2    Juric, D.3    Harsh, G.R.4    Vogel, H.5    Recht, L.D.6    Sikic, B.I.7
  • 17
    • 13844250828 scopus 로고    scopus 로고
    • Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors
    • 10.1073/pnas.162471999
    • JR Pollack T Sorlie CM Perou 2002 Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors Proc Natl Acad Sci USA 99 12963 12968 10.1073/pnas.162471999
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 12963-12968
    • Pollack, J.R.1    Sorlie, T.2    Perou, C.M.3
  • 21
    • 2642580037 scopus 로고    scopus 로고
    • Analysis of DNA copy number aberrations in hepatitis C virus-associated hepatocellular carcinomas by conventional CGH and array CGH
    • DOI 10.1038/modpathol.3800107
    • K Hashimoto N Mori T Tamesa 2004 Analysis of DNA copy number aberrations in hepatitis C virus-associated hepatocellular carcinomas by conventional CGH and array CGH Mod Pathol 17 617 622 10.1038/modpathol.3800107 (Pubitemid 38715482)
    • (2004) Modern Pathology , vol.17 , Issue.6 , pp. 617-622
    • Hashimoto, K.1    Mori, N.2    Tamesa, T.3    Okada, T.4    Kawauchi, S.5    Oga, A.6    Furuya, T.7    Tangoku, A.8    Oka, M.9    Sasaki, K.10
  • 25
    • 23944524790 scopus 로고    scopus 로고
    • High-resolution cDNA microarray-based comparative genomic hybridization analysis in neuroblastoma
    • DOI 10.1016/j.canlet.2004.12.056, PII S0304383505003228
    • QR Chen S Bilke J Khan 2005 High-resolution cDNA microarray-based comparative genomic hybridization analysis in neuroblastoma Cancer Lett 228 71 81 10.1016/j.canlet.2004.12.056 (Pubitemid 41188427)
    • (2005) Cancer Letters , vol.228 , Issue.1-2 , pp. 71-81
    • Chen, Q.-R.1    Bilke, S.2    Khan, J.3
  • 30
    • 33646422462 scopus 로고    scopus 로고
    • Frequent silencing of the candidate tumor suppressor PCDH20 by epigenetic mechanism in non-small-cell lung cancers
    • 10.1158/0008-5472.CAN-05-4437
    • I Imoto H Izumi S Yokoi 2006 Frequent silencing of the candidate tumor suppressor PCDH20 by epigenetic mechanism in non-small-cell lung cancers Cancer Res 66 4617 4626 10.1158/0008-5472.CAN-05-4437
    • (2006) Cancer Res , vol.66 , pp. 4617-4626
    • Imoto, I.1    Izumi, H.2    Yokoi, S.3
  • 31
    • 14944343419 scopus 로고    scopus 로고
    • Microarray analyses reveal strong influence of DNA copy number alterations on the transcriptional patterns in pancreatic cancer: Implications for the interpretation of genomic amplifications
    • DOI 10.1038/sj.onc.1208383
    • M Heidenblad D Lindgren JA Veltman 2005 Microarray analyses reveal strong influence of DNA copy number alterations on the transcriptional patterns in pancreatic cancer: implications for the interpretation of genomic amplifications Oncogene 24 1794 1801 10.1038/sj.onc.1208383 (Pubitemid 40461135)
    • (2005) Oncogene , vol.24 , Issue.10 , pp. 1794-1801
    • Heidenblad, M.1    Lindgren, D.2    Veltman, J.A.3    Jonson, T.4    Mahlamaki, E.H.5    Gorunova, L.6    Van Kessel, A.G.7    Schoenmakers, E.F.P.M.8    Hoglund, M.9
  • 32
    • 1942506656 scopus 로고    scopus 로고
    • Oncogene Expression and Genetic Background Influence the Frequency of DNA Copy Number Abnormalities in Mouse Pancreatic Islet Cell Carcinomas
    • DOI 10.1158/0008-5472.CAN-03-3522
    • JH Hager JG Hodgson J Fridlyand 2004 Oncogene expression and genetic background influence the frequency of DNA copy number abnormalities in mouse pancreatic islet cell carcinomas Cancer Res 64 2406 2410 10.1158/0008-5472.CAN- 03-3522 (Pubitemid 38523893)
    • (2004) Cancer Research , vol.64 , Issue.7 , pp. 2406-2410
    • Hager, J.H.1    Hodgson, J.G.2    Fridlyand, J.3    Hariono, S.4    Gray, J.W.5    Hanahan, D.6
  • 33
    • 33845961984 scopus 로고    scopus 로고
    • Comparative genomic hybridization array analysis and real time PCR reveals genomic alterations in squamous cell carcinomas of the lung
    • DOI 10.1016/j.lungcan.2006.09.018, PII S0169500206005150
    • YW Choi JS Choi LT Zheng 2007 Comparative genomic hybridization array analysis and real time PCR reveals genomic alterations in squamous cell carcinomas of the lung Lung Cancer 55 43 51 10.1016/j.lungcan.2006.09.018 (Pubitemid 46038877)
    • (2007) Lung Cancer , vol.55 , Issue.1 , pp. 43-51
    • Choi, Y.-W.1    Choi, J.S.2    Zheng, L.T.3    Lim, Y.J.4    Yoon, H.K.5    Kim, Y.H.6    Wang, Y.-P.7    Lim, Y.8
  • 34
    • 33845440685 scopus 로고    scopus 로고
    • Comparative genomic hybridization array analysis and real-time PCR reveals genomic copy number alteration for lung adenocarcinomas
    • DOI 10.1007/s00408-006-0009-0
    • JS Choi LT Zheng E Ha 2006 Comparative genomic hybridization array analysis and real-time PCR reveals genomic copy number alteration for lung adenocarcinomas Lung 184 355 362 10.1007/s00408-006-0009-0 (Pubitemid 44900544)
    • (2006) Lung , vol.184 , Issue.6 , pp. 355-362
    • Choi, J.S.1    Zheng, L.T.2    Ha, E.3    Lim, Y.J.4    Kim, Y.H.5    Wang, Y.-P.6    Lim, Y.7
  • 35
    • 38349106695 scopus 로고    scopus 로고
    • Evaluation and validation of candidate endogenous control genes for real-time quantitative PCR studies of breast cancer
    • doi:10.1186/1471-2199-8-107
    • McNeill RE, Miller N, Kerin MJ (2007) Evaluation and validation of candidate endogenous control genes for real-time quantitative PCR studies of breast cancer. BMC Mol Biol 8:107. doi: 10.1186/1471-2199-8-107
    • (2007) BMC Mol Biol , vol.8 , pp. 107
    • McNeill, R.E.1    Miller, N.2    Kerin, M.J.3
  • 37
    • 40249103182 scopus 로고    scopus 로고
    • Identification of genes involved in squamous cell carcinoma of the lung using synchronized data from DNA copy number and transcript expression profiling analysis
    • DOI 10.1016/j.lungcan.2007.08.037, PII S0169500207005028
    • KC Lo LC Stein JA Panzarella 2008 Identification of genes involved in squamous cell carcinoma of the lung using synchronized data from DNA copy number and transcript expression profiling analysis Lung Cancer 59 315 331 10.1016/j.lungcan.2007.08.037 (Pubitemid 351335103)
    • (2008) Lung Cancer , vol.59 , Issue.3 , pp. 315-331
    • Lo, K.C.1    Stein, L.C.2    Panzarella, J.A.3    Cowell, J.K.4    Hawthorn, L.5
  • 38
    • 0034108271 scopus 로고    scopus 로고
    • Tumor progression and metastasis
    • 10.1093/carcin/21.3.497
    • J Yokota 2000 Tumor progression and metastasis Carcinogenesis 21 497 503 10.1093/carcin/21.3.497
    • (2000) Carcinogenesis , vol.21 , pp. 497-503
    • Yokota, J.1
  • 40
    • 33645294070 scopus 로고    scopus 로고
    • Oncomirs - MicroRNAs with a role in cancer
    • A Esquela-Kerscher FJ Slack 2006 Oncomirs - microRNAs with a role in cancer Natl Rev 6 259 269
    • (2006) Natl Rev , vol.6 , pp. 259-269
    • Esquela-Kerscher, A.1    Slack, F.J.2
  • 41
    • 0842346437 scopus 로고    scopus 로고
    • Principles of Tumor Suppression
    • DOI 10.1016/S0092-8674(03)01075-4
    • CJ Sherr 2004 Principles of tumor suppression Cell 116 235 246 10.1016/S0092-8674(03)01075-4 (Pubitemid 38167315)
    • (2004) Cell , vol.116 , Issue.2 , pp. 235-246
    • Sherr, C.J.1
  • 42
    • 0041561057 scopus 로고    scopus 로고
    • Cell adhesion system and human cancer morphogenesis
    • DOI 10.1111/j.1349-7006.2003.tb01485.x
    • S Hirohashi Y Kanai 2003 Cell adhesion system and human cancer morphogenesis Cancer Sci 94 575 581 10.1111/j.1349-7006.2003.tb01485.x (Pubitemid 36975010)
    • (2003) Cancer Science , vol.94 , Issue.7 , pp. 575-581
    • Hirohashi, S.1    Kanai, Y.2
  • 44
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • 10.1016/S0092-8674(00)81683-9
    • D Hanahan RA Weinberg 2000 The hallmarks of cancer Cell 100 57 70 10.1016/S0092-8674(00)81683-9
    • (2000) Cell , vol.100 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 48
    • 0035127965 scopus 로고    scopus 로고
    • Cloning, expression and chromosomal location of NKX6B to 10q26, a region frequently deleted in brain tumors
    • DOI 10.1007/s003350010247
    • SH Lee JA Davison SM Vidal 2001 Cloning, expression and chromosomal location of NKX6B TO 10Q26, a region frequently deleted in brain tumors Mamm Genome 12 157 162 10.1007/s003350010247 (Pubitemid 32147672)
    • (2001) Mammalian Genome , vol.12 , Issue.2 , pp. 157-162
    • Lee, S.-H.1    Davison, J.A.2    Vidal, S.M.3    Belouchi, A.4
  • 49
    • 0347478159 scopus 로고    scopus 로고
    • Expression of a novel lacrimal gland gene lacritin in human breast tissues
    • DOI 10.1007/s00432-003-0514-y
    • B Weigelt AJ Bosma LJ van't Veer 2003 Expression of a novel lacrimal gland gene lacritin in human breast tissues J Cancer Res Clin Oncol 129 735 736 10.1007/s00432-003-0514-y (Pubitemid 38002305)
    • (2003) Journal of Cancer Research and Clinical Oncology , vol.129 , Issue.12 , pp. 735-736
    • Weigelt, B.1    Bosma, A.J.2    Van 't Veer, L.J.3
  • 51
    • 0033119702 scopus 로고    scopus 로고
    • Expression analysis of genes at 3q26-q27 involved in frequent amplification in squamous cell lung carcinoma
    • DOI 10.1016/S0959-8049(98)00419-5, PII S0959804998004195
    • A Racz N Brass D Heckel 1999 Expression analysis of genes at 3q26-q27 involved in frequent amplification in squamous cell lung carcinoma Eur J Cancer 35 641 646 10.1016/S0959-8049(98)00419-5 (Pubitemid 29192975)
    • (1999) European Journal of Cancer , vol.35 , Issue.4 , pp. 641-646
    • Racz, A.1    Brass, N.2    Heckel, D.3    Pahl, S.4    Remberger, K.5    Meese, E.6
  • 52
    • 0028898571 scopus 로고
    • Cloning and characterization of the human megakaryocyte growth and development factor (MGDF) gene
    • 10.1074/jbc.270.2.511
    • MS Chang J McNinch R Basu 1995 Cloning and characterization of the human megakaryocyte growth and development factor (MGDF) gene J Biol Chem 270 511 514 10.1074/jbc.270.2.511
    • (1995) J Biol Chem , vol.270 , pp. 511-514
    • Chang, M.S.1    McNinch, J.2    Basu, R.3
  • 53
    • 33745833017 scopus 로고    scopus 로고
    • Expression of Egr-1 gene and its correlation with the oncogene proteins in non-irradiated and irradiated esophageal squamous cell carcinoma
    • DOI 10.1111/j.1442-2050.2006.00575.x
    • MY Wu XY Wu QS Li 2006 Expression of Egr-1 gene and its correlation with the oncogene proteins in non-irradiated and irradiated esophageal squamous cell carcinoma Dis Esophagus 19 267 272 10.1111/j.1442-2050.2006.00575.x (Pubitemid 44027089)
    • (2006) Diseases of the Esophagus , vol.19 , Issue.4 , pp. 267-272
    • Wu, M.-Y.1    Wu, X.-Y.2    Li, Q.-S.3    Zheng, R.-M.4
  • 54
    • 0034742273 scopus 로고    scopus 로고
    • Experimental and clinicopathologic study on the relationship between transcription factor Egr-1 and esophageal carcinoma
    • MY Wu MH Chen YR Liang 2001 Experimental and clinicopathologic study on the relationship between transcription factor Egr-1 and esophageal carcinoma World J Gastroenterol 7 490 495
    • (2001) World J Gastroenterol , vol.7 , pp. 490-495
    • Wu, M.Y.1    Chen, M.H.2    Liang, Y.R.3
  • 55
    • 0036888651 scopus 로고    scopus 로고
    • Regulation of life and death by the zinc finger transcription factor Egr-1
    • DOI 10.1002/jcp.10178
    • G Thiel G Cibelli 2002 Regulation of life and death by the zinc finger transcription factor Egr-1 J Cell Physiol 193 287 292 10.1002/jcp.10178 (Pubitemid 35265949)
    • (2002) Journal of Cellular Physiology , vol.193 , Issue.3 , pp. 287-292
    • Thiel, G.1    Cibelli, G.2
  • 56
    • 0036212895 scopus 로고    scopus 로고
    • Epidermal growth factor and thrombin induced proliferation of immortalized human keratinocytes is coupled to the synthesis of Egr-1, a zinc finger transcriptional regulator
    • DOI 10.1002/jcb.10145
    • K Kaufmann G Thiel 2002 Epidermal growth factor and thrombin induced proliferation of immortalized human keratinocytes is coupled to the synthesis of Egr-1, a zinc finger transcriptional regulator J Cell Biochem 85 381 391 10.1002/jcb.10145 (Pubitemid 34274905)
    • (2002) Journal of Cellular Biochemistry , vol.85 , Issue.2 , pp. 381-391
    • Kaufmann, K.1    Thiel, G.2
  • 57
    • 0035881797 scopus 로고    scopus 로고
    • Epidermal growth factor and platelet-derived growth factor induce expression of Egr-1, a zinc finger transcription factor, in human malignant glioma cells
    • DOI 10.1016/S0022-510X(01)00562-7, PII S0022510X01005627
    • K Kaufmann G Thiel 2001 Epidermal growth factor and platelet-derived growth factor induce expression of Egr-1, a zinc finger transcription factor, in human malignant glioma cells J Neurol Sci 189 83 91 10.1016/S0022-510X(01) 00562-7 (Pubitemid 32776653)
    • (2001) Journal of the Neurological Sciences , vol.189 , Issue.1-2 , pp. 83-91
    • Kaufmann, K.1    Thiel, G.2
  • 58
    • 0034873282 scopus 로고    scopus 로고
    • The extracellular signal-regulated protein kinases Erk1/Erk2 stimulate expression and biological activity of the transcriptional regulator Egr-1
    • DOI 10.1515/BC.2001.135
    • K Kaufmann K Bach G Thiel 2001 The extracellular signal-regulated protein kinases Erk1/Erk2 stimulate expression and biological activity of the transcriptional regulator Egr-1 Biol Chem 382 1077 1081 10.1515/BC.2001.135 (Pubitemid 32750605)
    • (2001) Biological Chemistry , vol.382 , Issue.7 , pp. 1077-1081
    • Kaufmann, K.1    Bach, K.2    Thiel, G.3
  • 59
    • 0038603146 scopus 로고    scopus 로고
    • Regulation of tissue factor and inflammatory mediators by Egr-1 in a mouse endotoxemia model
    • DOI 10.1182/blood-2002-07-2303
    • R Pawlinski B Pedersen B Kehrle 2003 Regulation of tissue factor and inflammatory mediators by Egr-1 in a mouse endotoxemia model Blood 101 3940 3947 10.1182/blood-2002-07-2303 (Pubitemid 36857870)
    • (2003) Blood , vol.101 , Issue.10 , pp. 3940-3947
    • Pawlinski, R.1    Pedersen, B.2    Kehrle, B.3    Aird, W.C.4    Frank, R.D.5    Guha, M.6    Mackman, N.7
  • 60
    • 0036468259 scopus 로고    scopus 로고
    • Early Growth Response-1 gene mediates up-regulation of epidermal growth factor receptor expression during hypoxia
    • H Nishi KH Nishi AC Johnson 2002 Early Growth Response-1 gene mediates up-regulation of epidermal growth factor receptor expression during hypoxia Cancer Res 62 827 834
    • (2002) Cancer Res , vol.62 , pp. 827-834
    • Nishi, H.1    Nishi, K.H.2    Johnson, A.C.3
  • 61
    • 0034672586 scopus 로고    scopus 로고
    • CDNA cloning and genomic structure of three genes localized to human chromosome band 5q31 encoding potential nuclear proteins
    • 10.1006/geno.2000.6345
    • F Lai LA Godley AA Fernald 2000 cDNA cloning and genomic structure of three genes localized to human chromosome band 5q31 encoding potential nuclear proteins Genomics 70 123 130 10.1006/geno.2000.6345
    • (2000) Genomics , vol.70 , pp. 123-130
    • Lai, F.1    Godley, L.A.2    Fernald, A.A.3


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