Immunological cross-reactivity of mycobacterial topoisomerase I and divergence from other bacteria

Tuberculosis

Volumn 89, Issue 4, 2009, Pages 256-262

  Leelaram, Majety Naga ^a   Bhat, Anuradha Gopal ^a   Suneetha, Nunna ^a   Nagaraja, Valakunja ^a,b   Manjunath, Ramanathapuram ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

^b JAWAHARLAL NEHRU CENTRE FOR ADVANCED SCIENTIFIC RESEARCH   (India)

Author keywords

Monoclonal antibody; Mycobacteria; Relative affinity; Topoisomerase I

Indexed keywords

DNA TOPOISOMERASE; MONOCLONAL ANTIBODY; POLYCLONAL ANTIBODY;

ANIMAL CELL; ANIMAL EXPERIMENT; ANTIGEN BINDING; ARTICLE; BINDING AFFINITY; CROSS REACTION; DNA BINDING; ENZYME ANALYSIS; ENZYME BINDING; ENZYME STRUCTURE; ESCHERICHIA COLI; FEMALE; MOUSE; MYCOBACTERIUM SMEGMATIS; NONHUMAN; PRIORITY JOURNAL; ZINC FINGER MOTIF;

ANIMALS; ANTIBODIES, MONOCLONAL; BLOTTING, WESTERN; CROSS REACTIONS; DNA TOPOISOMERASES, TYPE I; ENZYME-LINKED IMMUNOSORBENT ASSAY; ESCHERICHIA COLI; MICE; MICE, INBRED BALB C; MYCOBACTERIUM SMEGMATIS; OLIGONUCLEOTIDES; SPECIES SPECIFICITY;

EID: 67650609833     PISSN: 14729792     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tube.2009.05.004     Document Type: Article

References (30)

1. Gellert M. DNA topoisomerases. Annu Rev Biochem 50 (1981) 879-910
2. Champoux J.J. DNA topoisomerases: structure, function and mechanism. Annu Rev Biochem 70 (2001) 369-413
3. Jain P., and Nagaraja V. An atypical type II topoisomerase from Mycobacterium smegmatis with positive supercoiling activity. Mol Microbiol 58 (2005) 1392-1405
4. Krogh B.O., and Shuman S. A poxvirus-like type IB topoisomerase family in bacteria. Proc Natl Acad Sci U S A 99 (2002) 1853-1858
5. Bhaduri T., Sikder D., and Nagaraja V. Sequence specific interaction of Mycobacterium smegmatis topoisomerase I with duplex DNA. Nucleic Acids Res 26 (1998) 1668-1674
6. Ahumada A., and Tse-Dinh Y.C. The Zn(II) binding motifs of E. coli DNA topoisomerase I is part of a high-affinity DNA binding domain. Biochem Biophys Res Commun 251 (1998) 509-514
7. Ahumada A., and Tse-Dinh Y.C. The role of the Zn(II) binding domain in the mechanism of E. coli DNA topoisomerase I. BMC Biochem 3 (2002) 13-26
8. Grant S.G., Jessee J., Bloom F.R., and Hanahan D. Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants. Proc Natl Acad Sci U S A 87 (1990) 4645-4649
9. Studier F.W., and Moffatt B.A. Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189 (1986) 113-130
10. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72 (1976) 248-254
11. Jain P., and Nagaraja V. Indispensable, functionally complementing N and C-terminal domains constitute site-specific topoisomerase I. J Mol Biol 357 (2006) 1409-1421
12. Manjunatha U.H., Mahadevan S., Visweswariah S.S., and Nagaraja V. Monoclonal antibodies to mycobacterial DNA gyrase A inhibit DNA supercoiling activity. Eur J Biochem 268 (2001) 2038-2046
13. Colcher D., Hand P.H., Nuti M., and Schlom J. A spectrum of monoclonal antibodies reactive with human mammary tumor cells. Proc Natl Acad Sci U S A 78 (1981) 3199-3203
14. Chiarella P., and Fazio V.M. Mouse monoclonal antibodies in biological research: strategies for high-throughput production. Biotechnol Lett 30 (2008) 1303-1310
15. Rath S., Stanley C.M., and Steward M.W. An inhibition enzyme immunoassay for estimating relative antibody affinity and affinity heterogeneity. J Immunol Methods 106 (1988) 245-249
16. Friguet B., Chaffotte A.F., Djavadi-Ohaniance L., and Goldberg M.E. Measurements of the true affinity constant in solution of antigen-antibody complexes by enzyme-linked immunosorbent assay. J Immunol Methods 77 (1985) 305-319
17. Kim B.B., Dikova E.B., Sheller U., Dikov M.M., Gavrilova E.M., and Egorov A.M. Evaluation of dissociation constants of antigen-antibody complexes by ELISA. J Immunol Methods 131 (1990) 213-222
18. Manjunatha U.H., Madhusudan K., Visweswariah S.S., and Nagaraja V. Structural heterogeneity in DNA gyrases from Gram-positive and Gram-negative bacteria. Curr Sci 79 (2000) 968-974
19. Cerutti M.L., Centeno J.M., de Prat-Gay G., and Goldbaum F.A. Antibody response to a viral transcriptional regulator. FEBS Lett 534 (2003) 202-206
20. Traish A.M., and Pavao M. Binding of site-directed monoclonal antibodies to an epitope located in the A/B region (amino acids 140-154) of human estrogen receptor-induced conformational changes in an epitope in the DNA-binding domain. Steroids 61 (1996) 549-556
21. Wakabayashi K., Sakata Y., and Aoki N. Conformation-specific monoclonal antibodies to the calcium-induced structure of protein C. J Biol Chem 261 (1986) 11097-11105
22. 2+-induced conformational changes in troponin C. Arch Biochem Biophys 466 (2007) 1-7
23. Asante-Appiah E., Seeholzer S.H., and Skalka A.M. Structural determinants of metal-induced conformational changes in HIV-1 integrase. J Biol Chem 273 (1998) 35078-35087
24. Chung H.K., Park S.C., and Rhee S.G. Conformation-specific monoclonal antibodies to glutamine synthetase in Escherichia coli. J Biol Chem 259 (1984) 11756-11762
25. Schultz P., Olland S., Oudet P., and Hancock R. Structure and conformational changes of DNA topoisomerase II visualized by electron microscopy. Proc Natl Acad Sci U S A 93 (1996) 5936-5940
26. Vaughn J., Huang S., Wessel I., Sorensen T.K., Hsieh T., Jensen L.H., et al. Stability of the topoisomerase II closed clamp conformation may influence DNA-stimulated ATP hydrolysis. J Biol Chem 280 (2005) 11920-11929
27. Zhu C.X., and Tse-Dinh Y.C. The acidic triad conserved in type IA DNA topoisomerases is required for binding of Mg(II) and subsequent conformational change. J Biol Chem 275 (2000) 5318-5322
28. Feinberg H., Lima C.D., and Mondragon A. Conformational changes in E. coli DNA topoisomerase I. Nat Struct Biol 6 (1999) 918-922
29. Yu L., Zhu C.X., Tse-Dinh Y.C., and Fesik S.W. Backbone dynamics of the C-terminal domain of Escherichia coli topoisomerase I in the absence and presence of single-stranded DNA. Biochemistry 35 (1996) 9661-9666
30. Waldmann T.A. Monoclonal antibodies in diagnosis and therapy. Science 252 (1991) 1657-1662