Sequence specific interaction of Mycobacterium smegmatis topoisomerase I with duplex DNA

Nucleic Acids Research

Volumn 26, Issue 7, 1998, Pages 1668-1674

  Bhaduri, Tisha ^a   Sikder, Devanjan ^a   Nagaraja, Valakunja ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE; DOUBLE STRANDED DNA; MAGNESIUM ION;

ARTICLE; DNA BINDING; DNA STRAND BREAKAGE; ELECTROPHORETIC MOBILITY; MOLECULAR RECOGNITION; MYCOBACTERIUM SMEGMATIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION;

BASE SEQUENCE; BINDING, COMPETITIVE; DNA; DNA TOPOISOMERASES, TYPE I; KINETICS; MAGNESIUM; MYCOBACTERIUM; OLIGODEOXYRIBONUCLEOTIDES; PLASMIDS; SUBSTRATE SPECIFICITY;

EID: 0032052762     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.7.1668     Document Type: Article

References (43)

1. Wang, J. C. (1985) Annu. Rev. Biochem. 54, 665-697.
2. Cozzarelli, N. R. (1980) Science 207, 953-960.
3. Gellert, M. (1981) Annu. Rev. Biochem. 50, 879-910.
4. Cozzarelli, N. R. (1992) Cell 71, 277-288.
5. DiNardo, S., Voelkel, K. A., Sternglanz, R., Reynolds, A. E. and Wright, A. (1982) Cell 31, 43-51.
6. Maxwell, A. and Gellert, M. (1986) Adv. Prot. Chem. 38, 69-107.
7. Morrison, A. and Cozzarelli, N. R. (1979) Cell 17, 175-184.
8. Bonven, B. J., Gocke, E. and Westergaard, O. (1985) Cell 41, 541-551.
9. Edwards, K. A., Halligan, B. D., Davis, J. L., Nivera, N. I. and Liu, L. F. (1982) Nucleic Acids Res. 10, 2565-2576.
10. Liu, L. F., Rowe, T. C., Yang, L., Tewey, K. and Chen, G. L. (1983) J. Biol. Chem. 258, 15365-15370.
11. Liu, L. F. and Wang, J. C. (1978) Cell 15, 979-984.
12. Fisher, L. M., Barot, H. A. and Cullen, M. E. (1986) EMBO J. 5, 1411-1418.
13. Pato, M. L., Howe, M. M. and Higgins, N. P. (1990) froc. Natl. Acad. Sci. USA 87, 8716-8720.
14. Andersen, H., Gocke, E., Bonven, B. J., Nielsen, O. F. and Westergaard, O. (1985) Nucleic Acids Res. 13, 1543-1557.
15. Shuman, S. and Prescott, J. (1990) J. Biol. Chem. 265, 17826-17836.
16. Gmunder, H., Kuratli, K. and Keck, W. (1997) Nucleic Acids Res. 25, 604-610.
17. Thomsen, B., Mollerup, S., Bonven, B. J., Frank, R., Blocker, H., Nielsen, O. F. and Westergaard, O. (1987) EMBO J. 6, 1817-1823.
18. Cove, M. E., Tingey, A. P. and Maxwell, A. (1987) Nucleic Acids Res. 25, 2716-2722.
19. Tse, Y.-C., Kirkegaard, K. and Wang, J. C. (1980) J. Biol. Chem. 255, 5560-5565.
20. Tse-Dinh, Y. -C., McCarron, B. G. H., Arentzen, R. and Chawdhry, V. (1983) Nucleic Acids Res. 11, 8691-8701.
21. Dean, F. B. and Cozzarelli, N. R. (1985) J. Biol. Chem. 260, 4984-4994.
22. Kirkegaard, K. and Wang, J. C. (1985) J. Mol. Biol. 185, 625-637.
23. Zhang, H. L. and DiGate, R. J. (1994) J. Biol. Chem. 269, 9052-9059.
24. Bradford, M. (1976) Anal. Biochem. 72, 248-251.
25. Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual. Second edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
26. Maxam, A. M. and Gilbert, W. (1980) Methods Enzymol. 70, 494-560.
27. Bhaduri, T. and Nagaraja, V. (1994) Ind. J. Biochem. Biophys. 31, 339-343.
28. Svejstrup, J. Q., Christiansen, K., Gromova, I. I., Andersen, A. H. and Westergaard, O. (1991) J. Mol. Biol. 222, 669-678.
29. Arsene Der Garabedian, P., Mirambeau, G. and Vermeersch, J. J. (1991) Biochemistry 30, 9940-9947.
30. Vipond, I. B., Baldwin, G. S. and Halford, S. E. (1995) Biochemistry 34, 697-704.
31. Jeltsch, A., Maschke, H., Selent, U. Wenz, C., Kohler, E., Connolly, B. A., Throgood, H. and Pingoud, A. (1995) Biochemistry 34, 6239-6246.
32. Kostrewa, D. and Winkler, F. K. (1995) Biochemistry 34, 683-696.
33. Zhu, C. -X., Roche, C. and Tse-Dinh, Y. -C. (1997) J. Biol. Chem. 272, 16206-16210.
34. Kirkegaard, K., Pflugfelder, G. and Wang, J. C. (1984) Cold Spring Harbor Symp. Quan. Biol. 49, 411-419.
35. Laemmli, U. K. (1970) Nature 227, 680-685.
36. Vershon, A. K., Liao, S. M., McClure, W. R. and Sauer, R. T. (1987) J. Mol. Biol. 195, 323-331.
37. Carey, J. (1988) Proc. Natl. Acad. Sci. USA 85, 980-979.
38. Higgins, N. P. and Cozzarelli, N. R. (1982) Nucleic Acids Res. 10, 6833-6847.
39. Kovalsky, O. I., Kozyavkin, S. A. and Slesarev, A. I. (1990) Nucleic Acids Res. 18, 2801-2805.
40. Wang, J. C. (1996) Annu. Rev. Biochem. 65, 635-692.
41. Williams, S. T., Sharpe, M. E. and Holt, J. G. (eds) (1989) Bergey's Manual of Systematic Bacteriology. Vol. 4. The Williams and Wilkins Co., Baltimore.
42. Stackebrandt, E. (1992) In Balows, A., Truper, H. G., Dworkin, M., Harder, W. and Schleifer, K.-H. (eds) The Prokaryotes. A Handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Application. Second edition. Springer-Verlag, New York..
43. Young, D. B. and Cole, S. T. (1993) J. Bacteriol. 180, 1-6.