-
2
-
-
0032189214
-
Bacterial and archeal type I topoisomerases
-
Tse-Dinh YC: Bacterial and archeal type I topoisomerases. Biochim. Biophys. Acta 1998, 1400:19-27
-
(1998)
Biochim. Biophys. Acta
, vol.1400
, pp. 19-27
-
-
Tse-Dinh, Y.C.1
-
3
-
-
0026555506
-
Control of bacterial DNA supercoiling
-
Drlica K: Control of bacterial DNA supercoiling. Mol. Microbiol. 1992, 6:425-433
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 425-433
-
-
Drlica, K.1
-
4
-
-
0028115776
-
Three dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I
-
Lima CD, Wang JC, Mondragon A: Three dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I. Nature 1994, 367:138-146
-
(1994)
Nature
, vol.367
, pp. 138-146
-
-
Lima, C.D.1
Wang, J.C.2
Mondragon, A.3
-
5
-
-
0023739410
-
Escherichia coli DNA topoisomerase I is a zinc metalloprotein with three repetitive zinc-binding domains
-
Tse-Dinh YC, Beran-Steed RK: Escherichia coli DNA topoisomerase I is a zinc metalloprotein with three repetitive zinc-binding domains. J. Biol. Chem. 1988, 263:15857-15859
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 15857-15859
-
-
Tse-Dinh, Y.C.1
Beran-Steed, R.K.2
-
6
-
-
0032552939
-
The Zn(II) binding motifs of Escherichia coli DNA topoisomerase I is part of a high-affinity DNA binding domain
-
Ahumada A, Tse-Dinh YC: The Zn(II) binding motifs of Escherichia coli DNA topoisomerase I is part of a high-affinity DNA binding domain. Biochem. Biophys. Res. Comm. 1998, 251:509-514
-
(1998)
Biochem. Biophys. Res. Comm.
, vol.251
, pp. 509-514
-
-
Ahumada, A.1
Tse-Dinh, Y.C.2
-
7
-
-
0034705341
-
C-terminal domains of Escherichia coli topoisomerase I belong to the zinc-ribbon superfamily
-
Grishin NV: C-terminal domains of Escherichia coli topoisomerase I belong to the zinc-ribbon superfamily. J. Mol. Biol 2000, 299:1165-1177
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 1165-1177
-
-
Grishin, N.V.1
-
9
-
-
0019332581
-
Covalent bonds between protein and DNA: Formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA
-
Tse YC, Kirkegaard K, Wang JC: Covalent bonds between protein and DNA: Formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA. J. Biol. Chem 1980, 255:5560-5565
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 5560-5565
-
-
Tse, Y.C.1
Kirkegaard, K.2
Wang, J.C.3
-
10
-
-
0020262662
-
Escherichia coli type-1 topoisomerases: Identification, mechanism and role in recombination
-
Dean FB, Krasnow MA, Otter R, Matzuk MM, Splegler SJ, Cozzarelli NR: Escherichia coli type-1 topoisomerases: Identification, mechanism and role in recombination. Cold Spring Harbor Symp. Quant. Biol. 1982, 47:769-777
-
(1982)
Cold Spring Harbor Symp. Quant. Biol.
, vol.47
, pp. 769-777
-
-
Dean, F.B.1
Krasnow, M.A.2
Otter, R.3
Matzuk, M.M.4
Splegler, S.J.5
Cozzarelli, N.R.6
-
11
-
-
0027179285
-
Crystallization of a 67 kDa fragment of Escherichia coli DNA topoisomerase I
-
Lima CD, Wang JC, Mondragon A: Crystallization of a 67 kDa fragment of Escherichia coli DNA topoisomerase I. J. Mol. Biol 1993, 232:1213-1216
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 1213-1216
-
-
Lima, C.D.1
Wang, J.C.2
Mondragon, A.3
-
12
-
-
0028713474
-
Biochemistry of bacterial type I DNA topoisomerases
-
Tse-Dinh YC: Biochemistry of bacterial type I DNA topoisomerases. Adv. Pharmacology 1994, 29A:21-37
-
(1994)
Adv. Pharmacology
, vol.29 A
, pp. 21-37
-
-
Tse-Dinh, Y.C.1
-
13
-
-
0017844753
-
Interaction between DNA and Escherichia coli protein ω: The formation of a complex between single-stranded DNA and ω protein
-
Depew RE, Liu LF, Wang JC: Interaction between DNA and Escherichia coli protein ω: The formation of a complex between single-stranded DNA and ω protein. J. Biol. Chem. 1978, 253:511-518
-
(1978)
J. Biol. Chem.
, vol.253
, pp. 511-518
-
-
Depew, R.E.1
Liu, L.F.2
Wang, J.C.3
-
14
-
-
0032513296
-
Identification of active site residues in Escherichia coli DNA topoisomerase I
-
Chen SJ, Wang JC: Identification of active site residues in Escherichia coli DNA topoisomerase I. J. Biol. Chem. 1998, 273:6050-6056
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 6050-6056
-
-
Chen, S.J.1
Wang, J.C.2
-
15
-
-
0019130885
-
E. coli and M. luteus DNA topoisomerase I can catalyze catenation or decatenation of double-stranded DNA rings
-
Tse YC, Wang JC: E. coli and M. luteus DNA topoisomerase I can catalyze catenation or decatenation of double-stranded DNA rings. Cell 1980, 22:269-276
-
(1980)
Cell
, vol.22
, pp. 269-276
-
-
Tse, Y.C.1
Wang, J.C.2
-
16
-
-
0020067542
-
Catenation of DNA rings by topoisomerases. Mechanism of control by spermidine
-
Krasnow MA, Cozzarelli NR: Catenation of DNA rings by topoisomerases. Mechanism of control by spermidine. J. Biol. Chem 1982, 257:2687-2693
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 2687-2693
-
-
Krasnow, M.A.1
Cozzarelli, N.R.2
-
17
-
-
0023712287
-
Identification of a potent decatenating enzyme from Escherichia coli
-
DiGate RJ, Marians KJ: Identification of a potent decatenating enzyme from Escherichia coli. J. Biol. Chem 1988, 263:13366-13373
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 13366-13373
-
-
DiGate, R.J.1
Marians, K.J.2
-
18
-
-
0021769843
-
Escherichia coli DNA topoisomerase III: Purification and characterization of a new type I enzyme
-
Srivenugopal S, Lockshon D, Morris DR: Escherichia coli DNA topoisomerase III: purification and characterization of a new type I enzyme. Biochemistry 1984, 23:1899-1906
-
(1984)
Biochemistry
, vol.23
, pp. 1899-1906
-
-
Srivenugopal, S.1
Lockshon, D.2
Morris, D.R.3
-
19
-
-
0028589156
-
Topoisomerase III, but not topoisomerase I, can support nascent chain elongation during theta-type DNA replication
-
Hiasa H, Marians KJ: Topoisomerase III, but not topoisomerase I, can support nascent chain elongation during theta-type DNA replication. J. Biol. Chem 1994, 269:32655-32659
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 32655-32659
-
-
Hiasa, H.1
Marians, K.J.2
-
20
-
-
0028240122
-
The carboxyl-terminal residues of Escherichia coli DNA topoisomerase III are involved in substrate binding
-
Zhang HL, DiGate RJ: The carboxyl-terminal residues of Escherichia coli DNA topoisomerase III are involved in substrate binding. J. Biol. Chem 1994, 269:9052-9059
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 9052-9059
-
-
Zhang, H.L.1
DiGate, R.J.2
-
21
-
-
0010107939
-
The role of the carboxyl-terminal amino acid residues in Escherichia coli DNA topoisomerase III-mediated catalysis
-
Zhang HL, Malpure S, Li Z, Hiasa H, DiGate RJ: The role of the carboxyl-terminal amino acid residues in Escherichia coli DNA topoisomerase III-mediated catalysis. J. Biol. Chem 1996, 271:9039-9045
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 9039-9045
-
-
Zhang, H.L.1
Malpure, S.2
Li, Z.3
Hiasa, H.4
DiGate, R.J.5
-
22
-
-
0018572806
-
Interaction between DNA and Escherichia coli DNA topoisomerase I
-
Liu LF, Wang JC: Interaction between DNA and Escherichia coli DNA topoisomerase I. J. Biol. Chem. 1979, 254:11082-11088
-
(1979)
J. Biol. Chem.
, vol.254
, pp. 11082-11088
-
-
Liu, L.F.1
Wang, J.C.2
-
23
-
-
0026071771
-
Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domains
-
Valee BL, Coleman JE, Auld DS: Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domains. Proc. Natl. Acad. Sci 1991, 88:999-1003
-
(1991)
Proc. Natl. Acad. Sci.
, vol.88
, pp. 999-1003
-
-
Valee, B.L.1
Coleman, J.E.2
Auld, D.S.3
-
24
-
-
0025255158
-
Zinc fingers and other metal-binding domains. Elements for interactions between macromolecules
-
Berg JM: Zinc fingers and other metal-binding domains. Elements for interactions between macromolecules. J. Biol. Chem 1990, 265:6513-6516
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 6513-6516
-
-
Berg, J.M.1
-
25
-
-
0027965575
-
Zinc-free and reduced T4 gene 32 protein binds single-stranded DNA weakly and fails to stimulate UvsX-catalyzed homologous pairing
-
Qiu H, Kodadek T, Giedroc DP: Zinc-free and reduced T4 gene 32 protein binds single-stranded DNA weakly and fails to stimulate UvsX-catalyzed homologous pairing J. Biol. Chem 1994, 269:2773-2781
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 2773-2781
-
-
Qiu, H.1
Kodadek, T.2
Giedroc, D.P.3
-
26
-
-
0033618289
-
DNA ligase III Is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase
-
Mackey ZB, Niedergang C, Murcia JM, Leppard J, Au K, Chen J, de Murcia G, Tomkinson AE: DNA ligase III Is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase. J. Biol. Chem 1999, 274:21679-21687
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 21679-21687
-
-
Mackey, Z.B.1
Niedergang, C.2
Murcia, J.M.3
Leppard, J.4
Au, K.5
Chen, J.6
De Murcia, G.7
Tomkinson, A.E.8
-
27
-
-
0032561130
-
Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC)
-
Morellet N, Demene H, Teilleux V, Huynh-Dinh T, de Rocquigny H, Fournie-Zaluski MC, Roques BP: Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC). J. Mol. Biol 1998, 283:419-434
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 419-434
-
-
Morellet, N.1
Demene, H.2
Teilleux, V.3
Huynh-Dinh, T.4
De Rocquigny, H.5
Fournie-Zaluski, M.C.6
Roques, B.P.7
-
28
-
-
0033983784
-
Identification of a unique domain essential for Escherichia coli DNA topoisomerase III-catalysed decatenation of replication intermediates
-
Li Z, Mondragon A, Hiasa H, Marians KJ, DiGate RJ: Identification of a unique domain essential for Escherichia coli DNA topoisomerase III-catalysed decatenation of replication intermediates. Mol. Microbiol. 2000, 35:888-895
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 888-895
-
-
Li, Z.1
Mondragon, A.2
Hiasa, H.3
Marians, K.J.4
DiGate, R.J.5
-
29
-
-
0033571624
-
The structure of Escherichia coli DNA topoisomerase III
-
Mondragon A, DiGate RJ: The structure of Escherichia coli DNA topoisomerase III. Structure 1999, 7:1373-1383
-
(1999)
Structure
, vol.7
, pp. 1373-1383
-
-
Mondragon, A.1
DiGate, R.J.2
-
31
-
-
0026333906
-
Zinc(II) coordination in Escherichia coli DNA topoisomerase I is required for cleavable complex formation with DNA
-
Tse-Dinh YC: Zinc(II) coordination in Escherichia coli DNA topoisomerase I is required for cleavable complex formation with DNA. J. Biol. Chem. 1991, 266:14317-14320
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 14317-14320
-
-
Tse-Dinh, Y.C.1
-
32
-
-
0029148212
-
Mutation in Cys662 of Escherichia coli DNA topoisomerase I confers temperature sensitivity and change in DNA cleavage specificity
-
Zhu CX, Qi H, Tse-Dinh YC: Mutation in Cys662 of Escherichia coli DNA topoisomerase I confers temperature sensitivity and change in DNA cleavage specificity. J. Mol. Biol. 1995, 250:609-616
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 609-616
-
-
Zhu, C.X.1
Qi, H.2
Tse-Dinh, Y.C.3
-
33
-
-
0035824588
-
Hyperthermophilic topoisomerase I from Thermotoga maritima. A very efficient enzyme that functions independently of zinc binding
-
Viard T, Lamour V, Duguet M, de la Tours CB: Hyperthermophilic topoisomerase I from Thermotoga maritima. A very efficient enzyme that functions independently of zinc binding. J. Biol. Chem 2001, 276:46495-46503
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 46495-46503
-
-
Viard, T.1
Lamour, V.2
Duguet, M.3
De La Tours, C.B.4
-
34
-
-
0032577570
-
DNA topoisomerase I from Mycobacterium smegmatis. An enzyme with distinct features
-
Bhaduri T, Bagui TK, Sikder D, Nagaraja V: DNA topoisomerase I from Mycobacterium smegmatis. An enzyme with distinct features. J. Biol. Chem. 1998, 273:13925-13932
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 13925-13932
-
-
Bhaduri, T.1
Bagui, T.K.2
Sikder, D.3
Nagaraja, V.4
-
35
-
-
0032571448
-
Topoisomerase I of Helicobacter pylori: Juxtaposition with a flagellin gene (flaB) and functional requirement of a fourth zinc finger motif
-
Suerbaum S, Brauer-Steppkes T, Labigne A, Cameron B, Drlica K: Topoisomerase I of Helicobacter pylori: juxtaposition with a flagellin gene (flaB) and functional requirement of a fourth zinc finger motif. Gene 1998, 210:151-161
-
(1998)
Gene
, vol.210
, pp. 151-161
-
-
Suerbaum, S.1
Brauer-Steppkes, T.2
Labigne, A.3
Cameron, B.4
Drlica, K.5
-
36
-
-
0024818386
-
The carboxyl terminal domain of E. coli DNA topoisomerase I confers higher affinity to DNA
-
Beran-Steed RK, Tse-Dinh YC: The carboxyl terminal domain of E. coli DNA topoisomerase I confers higher affinity to DNA. Proteins Struct. Funct. Genet 1989, 6:249-258
-
(1989)
Proteins Struct. Funct. Genet.
, vol.6
, pp. 249-258
-
-
Beran-Steed, R.K.1
Tse-Dinh, Y.C.2
-
37
-
-
0343052266
-
Compendium of DNA topoisomerase sequences
-
Caron PR: Compendium of DNA topoisomerase sequences. Methods Mol. Biol 1999, 94:279-316
-
(1999)
Methods Mol. Biol.
, vol.94
, pp. 279-316
-
-
Caron, P.R.1
-
38
-
-
0034695630
-
Cloning and characterization of Drosophila topoisomerase IIIbeta. Relaxation of hypernegatively supercoiled DNA
-
Wilson TM, Chen AD, Hsieh T: Cloning and characterization of Drosophila topoisomerase IIIbeta. Relaxation of hypernegatively supercoiled DNA. J. Biol Chem 2000, 275:1533-1540
-
(2000)
J. Biol Chem.
, vol.275
, pp. 1533-1540
-
-
Wilson, T.M.1
Chen, A.D.2
Hsieh, T.3
-
39
-
-
0033522905
-
Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling
-
Masse E, Drolet M: Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling J. Biol. Chem 1999, 274:16659-16664
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 16659-16664
-
-
Masse, E.1
Drolet, M.2
-
40
-
-
0034737641
-
The Bloom's syndrome gene product interacts with topoisomerase III
-
Wu L, Davies SL, North PS, Goulaouic H, Riou JF, Turley H, Gatter KC, Hickson ID: The Bloom's syndrome gene product interacts with topoisomerase III. J. Biol Chem 2000, 275:9636-9644
-
(2000)
J. Biol Chem.
, vol.275
, pp. 9636-9644
-
-
Wu, L.1
Davies, S.L.2
North, P.S.3
Goulaouic, H.4
Riou, J.F.5
Turley, H.6
Gatter, K.C.7
Hickson, I.D.8
-
41
-
-
3342973624
-
Overexpression and purification of bacterial DNA topoisomerase I
-
Zhu CX, Tse-Dinh YC: Overexpression and purification of bacterial DNA topoisomerase I. Methods Mol. Biol 1999, 94:145-151
-
(1999)
Methods Mol. Biol.
, vol.94
, pp. 145-151
-
-
Zhu, C.X.1
Tse-Dinh, Y.C.2
-
42
-
-
0023042753
-
Probing the structural domains and function in vivo of Escherichia coli DNA topoisomerase I by mutagenesis
-
Zumstein L, Wang JC: Probing the structural domains and function in vivo of Escherichia coli DNA topoisomerase I by mutagenesis. J. Mol. Biol. 1986, 191:333-340
-
(1986)
J. Mol. Biol.
, vol.191
, pp. 333-340
-
-
Zumstein, L.1
Wang, J.C.2
-
43
-
-
0344761956
-
Purification and protein composition of PM2, the first lipid-containing bacterial virus to be isolated
-
Kivela HM, Mannisto RH, Kalkkinen N, Bamford DH: Purification and protein composition of PM2, the first lipid-containing bacterial virus to be isolated. Virology 1999, 262:364-374
-
(1999)
Virology
, vol.262
, pp. 364-374
-
-
Kivela, H.M.1
Mannisto, R.H.2
Kalkkinen, N.3
Bamford, D.H.4
-
44
-
-
0016295651
-
Interactions between twisted DNAs and enzymes: The effects of superhelical turns
-
Wang JC: Interactions between twisted DNAs and enzymes: the effects of superhelical turns. J. Mol. Biol 1974, 87:797-816
-
(1974)
J. Mol. Biol.
, vol.87
, pp. 797-816
-
-
Wang, J.C.1
-
45
-
-
0019570599
-
Mutations in the gene coding for Escherichia coli DNA topoisomerase I affect transcription and transposition
-
Sternglanz R, DiNardo S, Voelkel KA, Nishimura Y, Hirota Y, Becherer K, Zumstein L, Wang JC: Mutations in the gene coding for Escherichia coli DNA topoisomerase I affect transcription and transposition. Proc. Natl. Acad. Sci. USA 1981, 78:2747-51
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 2747-2751
-
-
Sternglanz, R.1
DiNardo, S.2
Voelkel, K.A.3
Nishimura, Y.4
Hirota, Y.5
Becherer, K.6
Zumstein, L.7
Wang, J.C.8
|