Widespread gene conversion of alpha-2-fucosyltransferase genes in mammals

Journal of Molecular Evolution

Volumn 69, Issue 1, 2009, Pages 22-31

  Abrantes, Joana ^a,b,c   Posada, David ^d   Guillon, Patrice ^b   Esteves, Pedro J ^a,e   Le Pendu, Jacques ^b  

^a CENTRO DE INVESTIGAÇÃO EM BIODIVERSIDADE E RECURSOS GENÉTICOS   (Portugal)

^b UNIVERSITÉ DE NANTES   (France)

^c UNIVERSITY OF PORTO   (Portugal)

^d UNIVERSITY OF VIGO   (Spain)

^e INSTITUTO DE INVESTIGAÇÃO E FORMAÇÃO AVANÇADA EM CIÊNCIAS E TECNOLOGIAS DA SAÚDE   (Portugal)

Author keywords

Fucosyltransferases; Gene conversion; Histo blood group antigens

Indexed keywords

AMINO ACID; FUCOSYLTRANSFERASE; GLYCAN;

ALLELE; ARTICLE; CARBOHYDRATE SYNTHESIS; CARBOXY TERMINAL SEQUENCE; ENZYME ACTIVE SITE; EXON; FUT1 GENE; FUT2 GENE; GENE; GENE CONVERSION; GENE DUPLICATION; GENE LOCATION; GENE SEQUENCE; GENOME; HUMAN; MAMMAL; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIMATE; RABBIT; SEC1 GENE;

MAMMALIA; ORYCTOLAGUS CUNICULUS; PRIMATES;

EID: 67650293360     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-009-9239-0     Document Type: Article

References (40)

1. F Abascal R Zardoya D Posada 2005 ProtTest: selection of best-fit models of protein evolution Bioinformatics 21 2104 2105 (Pubitemid 40668057)
2. MA Amin JH Ruth CS Haas A Pakozdi PJ Mansfield J Haghshenas AE Koch 2008 H-2g, a glucose analog of blood group H antigen, mediates mononuclear cell recruitment via Src and phosphatidylinositol 3-kinase pathways Arthritis Rheum 58 689 695
3. PA Apoil F Roubinet S Despiau R Mollicone R Oriol A Blancher 2000 Evolution of α2-fucosyltransferase genes in primates: relation between an intronic Alu-Y element and red cell expression of ABH antigen Mol Biol Evol 17 337 351 (Pubitemid 30123755)
4. M Azevedo S Eriksson N Mendes J Serpa C Figueiredo LP Resende N Ruvöen-Clouet R Haas T Borén J Le Pendu L David 2008 Infection by Helicobacter pylori expressing the BabA adhesin is influenced by the secretor phenotype J Pathol 215 308 316 (Pubitemid 351956712)
5. JP Barreaud K Saunier J Souchaire D Delourme A Oulmouden R Oriol H Levéziel R Julien JM Petit 2000 Three bovine α2-fucosyltransferase genes encode enzymes that preferentially transfer fucose on Galβ1-3GalNAc acceptor substrates Glycobiology 10 611 621 (Pubitemid 30398416)
6. T Boren P Falk KA Roth G Larson S Normak 1993 Attachment of Helicobacter pylori to human gastric epithelium mediated by blood group antigens Science 262 1892 1895 (Pubitemid 24041864)
7. BN Borges TS Paiva ML Harada 2008 Evolution of the SEC1 gene in New World monkey lineages (Primates, Platyrrhini) Genet Mol Res 7 663 678
8. C Breton R Oriol A Imberty 1998 Conserved structural features in eukaryotic and prokaryotic fucosyltransferases Glycobiology 8 87 94 (Pubitemid 28066364)
9. C Breton L Snajdrovà C Jeanneau J Koca A Imberty 2006 Structures and mechanisms of glycosyltransferases Glycobiology 16 29R 37R
10. V Bureau S Marionneau A Cailleau-Thomas B Le Moullac-Vaydie T Liehr J Le Pendu 2001 Comparison of the three rat GDP-L-fucose:β-d-galactoside 2-α-L-fucosyltransferases FTA, FTB and FTC Eur J Biochem 268 1006 1019 (Pubitemid 32328345)
11. JJ Garcia-Vallejo E van Liempt P da Costa Martins C Beckers B van het Hof SI Gringhuis JJ Zwaginga W van Dijk TB Geitjenbeek Y van Kooyk I van Die 2008 DC-SIGN mediates adhesion and rolling of dendritic cells on primary human umbilical vein endothelial cells through Lewis Y antigen expressed on ICAM-2 Mol Immunol 45 2359 2369
12. P Guillon N Ruvöen-Clouet B Le Moullac-Vaidye S Marchandeau J Le Pendu 2009 Association between expression of the H histo-blood group antigen α1,2fucosyltransferases polymorphism of wild rabbits, and sensitivity to rabbit hemorrhagic disease virus Glycobiology 19 21 28
13. S Guindon O Gascuel 2003 A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Syst Biol 52 696 704 (Pubitemid 37365050)
14. y/H: an endothelial-selective, cytokine-inducible, angiogenic mediator J Immunol 164 4868 4877 (Pubitemid 30238091)
15. M Iwamori SE Domino 2004 Tissue-specific loss of fucosylated glycolipids in mice targeted deletion of alpha(1,2)fucosyltransferase genes Biochem J 380 75 81 (Pubitemid 38725731)
16. Y Koda H Tachida H Wang Y Liu M Soejima AA Ghaderi O Takenada H Kimura 2001 Contrasting patterns of polymorphisms at the ABO-secretor gene (FUT2) and plasma (1, 3)fucosyltrasnferase gene (FUT6) in human populations Genetics 158 747 756 (Pubitemid 32552313)
17. SL Kosakovsky-Pond D Posada MB Gravenor CH Woelk S Frost 2006 Automated phylogenetic detection of recombination using a genetic algorithm Mol Biol Evol 23 1891 1901 (Pubitemid 44412875)
18. SL Kosakovsky-Pond D Posada MB Gravenor CH Woelk S Frost 2006 GARD: a genetic algorithm for recombination detection Bioinformatics 22 3096 3098 (Pubitemid 44884087)
19. J Le Pendu N Ruvöen-Clouet E Kindberg L Svensson 2006 Mendelian resistance to human norovirus infections Semin Immunol 18 375 386 (Pubitemid 44511886)
20. S Marionneau A Cailleau-Thomas J Rocher B Le Moullac-Vaidye N Ruvoën-Clouet M Clément J Le Pendu 2001 ABH and Lewis histo-blood group antigens, a model for the meaning of oligosaccharide diversity in the face of a changing world Biochimie 83 565 573 (Pubitemid 32821220)
21. TM Moehler S Sauer M Witzel M Andrulis JJ Garcia-Vallejo R Grobholz M Willhauck-Fleckenstein A Greiner H Goldschmidt R Schwartz-Albiez 2008 Involvement of alpha 1-2-fucosyltransferase (FUT1) and surface-expressed Lewis(y) (CD174) in first endothelial cell-cell contacts during angiogenesis J Cell Physiol 215 27 36
22. Ohno S (1970) Evolution by gene duplication. Springer, New York
23. R Oriol JJ Candelier R Mollicone 2000 Molecular genetics of H Vox Sang 78 105 118
24. D Posada 2006 ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution online Nucleic Acids Res 34 W700 W703
25. V Ravn E Dabelsteen 2000 Tissue distribution of histo-blood group antigens APMIS 108 1 28 (Pubitemid 30090251)
26. GM Ruiz-Palacios LE Cervantes P Ramos B Chavez-Munguia DS Newburg 2003 Campylobacter jejuni binds intestinal H(O) antigen and fucosyloligosaccharides of human milk inhibit its binding and infection J Biol Chem 278 14112 14120
27. K Saunier JP Barreaud J Eggen R Oriol H Levéziel R Julien JM Petit 2001 Organization of the bovine alpha2-fucosyltransferase gene cluster suggests that the Sec1 gene might have been shaped through a nonautonomous L1-retrotransposition event within the same locus Mol Biol Evol 18 2083 2091 (Pubitemid 33028899)
28. SA Sawyer 1989 Statistical tests for detecting gene conversion Mol Biol Evol 6 526 538
29. H Shimodaira M Hassegawa 1999 Multiple Comparisons of log-likelihoods with applications to phylogenetic inference Mol Biol Evol 16 1114 1234
30. M Soejima J Fujihara H Takeshita Y Koda 2008 Sec1-FUT2-Sec1 hybrid allele generated by interlocus gene conversion Transfusion 48 488 492 (Pubitemid 351294576)
31. JA St John C Claxton MW Robinson F Yamamoto SE Domino B Key 2006 Genetic manipulation of blood group carbohydrates alters development and pathfinding of primary sensory axons of the olfactory systems Dev Biol 298 470 484 (Pubitemid 44441187)
32. A Stapleton TM Hooton C Fennell PL Roberts WE Stamm 1995 Effect of secretor status on vaginal and rectal colonization with fimbriated Escherichia coli in women with and without recurrent urinary tract infection J Infect Dis 171 717 720
33. Swofford DL (2000) Phylogenetic analysis using Parsimony (*and other methods). Sinauer Associates, Sunderland
34. KM Teshima H Innan 2004 The effect of conversion on the divergence between duplicated genes Genetics 166 1553 1560 (Pubitemid 38507068)
35. J Thompson D Higgins T Gibson 1994 ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice Nucl Acid Res 22 4673 4680 (Pubitemid 24354800)
36. H Uchida H Kinoshita Y Kawai H Kitazawa K Miura K Shiiba A Horii K Kimura N Taketomo M Oda T Yajima T Saito 2006 Lactobacilli binding human A-antigen expressed in intestinal mucosa Res Microbiol 157 659 665 (Pubitemid 44236321)
37. FF Wagner WA Flegel 1997 Polymorphism of the h allele and the population frequency of sporadic nonfunctional alleles Transfusion 37 284 290 (Pubitemid 27142856)
38. B Walsh 2003 Population-genetic models of the fates of duplicated genes Genetica 118 279 294 (Pubitemid 36821056)
39. J Walsh 1987 Sequence-dependent gene conversion: can duplicate genes diverge fast enough to escape gene conversion? Genetics 117 543 557
40. J Walsh 1995 How often do duplicated genes evolve new functions? Genetics 139 421 428