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Volumn 33, Issue 10, 2009, Pages 1070-1076

The genomic structure, alternative splicing and immune response of Chlamys farreri thioester-containing protein

Author keywords

Alternative splicing; Chlamys farreri; Gene structure; Immune response; Nonsense mediated decay (NMD); Thioester containing protein (TEP)

Indexed keywords

BINDING PROTEIN; COMPLEMENTARY DNA; GENOMIC DNA; MESSENGER RNA; THIOESTER CONTAINING PROTEIN; UNCLASSIFIED DRUG;

EID: 67650220906     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2009.05.007     Document Type: Article
Times cited : (26)

References (40)
  • 1
    • 0346157328 scopus 로고    scopus 로고
    • Thioester-containing proteins and insect immunity
    • Blandin S., and Levashina E.A. Thioester-containing proteins and insect immunity. Mol Immunol 40 12 (2004) 903-908
    • (2004) Mol Immunol , vol.40 , Issue.12 , pp. 903-908
    • Blandin, S.1    Levashina, E.A.2
  • 2
    • 0028670452 scopus 로고
    • Alpha 2-macroglobulin, complement, and biologic defense: antigens, growth factors, microbial proteases, and receptor ligation
    • Chu C.T., and Pizzo S.V. Alpha 2-macroglobulin, complement, and biologic defense: antigens, growth factors, microbial proteases, and receptor ligation. Lab Invest 71 6 (1994) 792-812
    • (1994) Lab Invest , vol.71 , Issue.6 , pp. 792-812
    • Chu, C.T.1    Pizzo, S.V.2
  • 3
    • 0032416611 scopus 로고    scopus 로고
    • The phylogeny and evolution of the thioester bond-containing proteins C3, C4 and alpha 2-macroglobulin
    • Dodds A.W., and Law S.K. The phylogeny and evolution of the thioester bond-containing proteins C3, C4 and alpha 2-macroglobulin. Immunol Rev 166 (1998) 15-26
    • (1998) Immunol Rev , vol.166 , pp. 15-26
    • Dodds, A.W.1    Law, S.K.2
  • 4
    • 0036493793 scopus 로고    scopus 로고
    • Cell surface antigen CD109 is a novel member of the alpha (2) macroglobulin/C3, C4, C5 family of thioester-containing proteins
    • Lin M., Sutherland D.R., Horsfall W., Totty N., Yeo E., Nayar R., et al. Cell surface antigen CD109 is a novel member of the alpha (2) macroglobulin/C3, C4, C5 family of thioester-containing proteins. Blood 99 5 (2002) 1683-1691
    • (2002) Blood , vol.99 , Issue.5 , pp. 1683-1691
    • Lin, M.1    Sutherland, D.R.2    Horsfall, W.3    Totty, N.4    Yeo, E.5    Nayar, R.6
  • 5
    • 33751034985 scopus 로고    scopus 로고
    • Structural insights into the central complement component C3
    • Janssen B.J., and Gros P. Structural insights into the central complement component C3. Mol Immunol 44 1-3 (2007) 3-10
    • (2007) Mol Immunol , vol.44 , Issue.1-3 , pp. 3-10
    • Janssen, B.J.1    Gros, P.2
  • 6
    • 0034633786 scopus 로고    scopus 로고
    • Constitutive expression of a complement-like protein in Toll and JAK gain-of-function mutants of Drosophila
    • Lagueux M., Perrodou E., Levashina E.A., Capovilla M., and Hoffmann J.A. Constitutive expression of a complement-like protein in Toll and JAK gain-of-function mutants of Drosophila. Proc Natl Acad Sci USA 97 21 (2000) 11427-11432
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.21 , pp. 11427-11432
    • Lagueux, M.1    Perrodou, E.2    Levashina, E.A.3    Capovilla, M.4    Hoffmann, J.A.5
  • 7
    • 4844221596 scopus 로고    scopus 로고
    • Bacterial alpha2-macroglobulins: colonization factors acquired by horizontal gene transfer from the metazoan genome?
    • Budd A., Blandin S., Levashina E.A., and Gibson T.J. Bacterial alpha2-macroglobulins: colonization factors acquired by horizontal gene transfer from the metazoan genome?. Genome Biol 5 6 (2004) R38
    • (2004) Genome Biol , vol.5 , Issue.6
    • Budd, A.1    Blandin, S.2    Levashina, E.A.3    Gibson, T.J.4
  • 8
    • 0030593030 scopus 로고    scopus 로고
    • C3d of complement as a molecular adjuvant: bridging innate and acquired immunity
    • Dempsey P.W., Allison M.E., Akkaraju S., Goodnow C.C., and Fearon D.T. C3d of complement as a molecular adjuvant: bridging innate and acquired immunity. Science 271 5247 (1996) 348-350
    • (1996) Science , vol.271 , Issue.5247 , pp. 348-350
    • Dempsey, P.W.1    Allison, M.E.2    Akkaraju, S.3    Goodnow, C.C.4    Fearon, D.T.5
  • 9
    • 0344136374 scopus 로고
    • Interaction between the third complement protein and cell surface macromolecules
    • Law S.K., and Levine R.P. Interaction between the third complement protein and cell surface macromolecules. Proc Natl Acad Sci USA 74 7 (1977) 2701-2705
    • (1977) Proc Natl Acad Sci USA , vol.74 , Issue.7 , pp. 2701-2705
    • Law, S.K.1    Levine, R.P.2
  • 10
    • 0032947258 scopus 로고    scopus 로고
    • Opsonic complement component C3 in the solitary ascidian, Halocynthia roretzi
    • Nonaka M., Azumi K., Ji X., Namikawa-Yamada C., Sasaki M., Saiga H., et al. Opsonic complement component C3 in the solitary ascidian, Halocynthia roretzi. J Immunol 162 1 (1999) 387-391
    • (1999) J Immunol , vol.162 , Issue.1 , pp. 387-391
    • Nonaka, M.1    Azumi, K.2    Ji, X.3    Namikawa-Yamada, C.4    Sasaki, M.5    Saiga, H.6
  • 11
    • 0032999775 scopus 로고    scopus 로고
    • Complement systems in invertebrates. The ancient alternative and lectin pathways
    • Smith L.C., Azumi K., and Nonaka M. Complement systems in invertebrates. The ancient alternative and lectin pathways. Immunopharmacology 42 1-3 (1999) 107-120
    • (1999) Immunopharmacology , vol.42 , Issue.1-3 , pp. 107-120
    • Smith, L.C.1    Azumi, K.2    Nonaka, M.3
  • 12
    • 0035831034 scopus 로고    scopus 로고
    • Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito, Anopheles gambiae
    • Levashina E.A., Moita L.F., Blandin S., Vriend G., Lagueux M., and Kafatos F.C. Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito, Anopheles gambiae. Cell 104 5 (2001) 709-718
    • (2001) Cell , vol.104 , Issue.5 , pp. 709-718
    • Levashina, E.A.1    Moita, L.F.2    Blandin, S.3    Vriend, G.4    Lagueux, M.5    Kafatos, F.C.6
  • 13
    • 33748431853 scopus 로고    scopus 로고
    • Genomic view of the evolution of the complement system
    • Nonaka M., and Kimura A. Genomic view of the evolution of the complement system. Immunogenetics 58 9 (2006) 701-713
    • (2006) Immunogenetics , vol.58 , Issue.9 , pp. 701-713
    • Nonaka, M.1    Kimura, A.2
  • 14
    • 25844487754 scopus 로고    scopus 로고
    • Characterization of a C3-like cDNA in a coral: phylogenetic implications
    • Dishaw L.J., Smith S.L., and Bigger C.H. Characterization of a C3-like cDNA in a coral: phylogenetic implications. Immunogenetics 57 7 (2005) 535-548
    • (2005) Immunogenetics , vol.57 , Issue.7 , pp. 535-548
    • Dishaw, L.J.1    Smith, S.L.2    Bigger, C.H.3
  • 15
    • 60649110212 scopus 로고    scopus 로고
    • Characterization of a C3 and a factor B-like in the carpet-shell clam, Ruditapes decussatus
    • Prado-Alvarez M., Rotllant J., Gestal C., Novoa B., and Figueras A. Characterization of a C3 and a factor B-like in the carpet-shell clam, Ruditapes decussatus. Fish Shellfish Immunol 26 2 (2009) 305-315
    • (2009) Fish Shellfish Immunol , vol.26 , Issue.2 , pp. 305-315
    • Prado-Alvarez, M.1    Rotllant, J.2    Gestal, C.3    Novoa, B.4    Figueras, A.5
  • 16
    • 53849091298 scopus 로고    scopus 로고
    • Identification and molecular characterization of a complement C3 molecule in a lophotrochozoan, the Hawaiian bobtail squid Euprymna scolopes
    • Castillo M.G., Goodson M.S., and McFall-Ngai M. Identification and molecular characterization of a complement C3 molecule in a lophotrochozoan, the Hawaiian bobtail squid Euprymna scolopes. Dev Comp Immunol 33 1 (2009) 69-76
    • (2009) Dev Comp Immunol , vol.33 , Issue.1 , pp. 69-76
    • Castillo, M.G.1    Goodson, M.S.2    McFall-Ngai, M.3
  • 17
    • 13444269022 scopus 로고    scopus 로고
    • The ancient origin of the complement system
    • Zhu Y., Thangamani S., Ho B., and Ding J.L. The ancient origin of the complement system. EMBO J 24 2 (2005) 382-394
    • (2005) EMBO J , vol.24 , Issue.2 , pp. 382-394
    • Zhu, Y.1    Thangamani, S.2    Ho, B.3    Ding, J.L.4
  • 19
    • 34248582388 scopus 로고    scopus 로고
    • Molecular cloning and characterization of a thioester-containing protein from Zhikong scallop Chlamys farreri
    • Zhang H., Song L., Li C., Zhao J., Wang H., Gao Q., et al. Molecular cloning and characterization of a thioester-containing protein from Zhikong scallop Chlamys farreri. Mol Immunol 44 14 (2007) 3492-3500
    • (2007) Mol Immunol , vol.44 , Issue.14 , pp. 3492-3500
    • Zhang, H.1    Song, L.2    Li, C.3    Zhao, J.4    Wang, H.5    Gao, Q.6
  • 20
    • 10244239317 scopus 로고    scopus 로고
    • Consequences of regulated pre-mRNA splicing in the immune system
    • Lynch K.W. Consequences of regulated pre-mRNA splicing in the immune system. Nat Rev Immunol 4 12 (2004) 931-940
    • (2004) Nat Rev Immunol , vol.4 , Issue.12 , pp. 931-940
    • Lynch, K.W.1
  • 22
    • 3242690862 scopus 로고    scopus 로고
    • The new view of animalphylogeny
    • Halanych K.M. The new view of animalphylogeny. Annu Rev Ecol Evol Syst 35 1 (2004) 229-256
    • (2004) Annu Rev Ecol Evol Syst , vol.35 , Issue.1 , pp. 229-256
    • Halanych, K.M.1
  • 23
    • 42649084047 scopus 로고    scopus 로고
    • Genomic structure of nitric oxide synthase in the terrestrial slug is highly conserved
    • Matsuo R., and Misawakito E. Genomic structure of nitric oxide synthase in the terrestrial slug is highly conserved. Gene 415 1-2 (2008) 74-81
    • (2008) Gene , vol.415 , Issue.1-2 , pp. 74-81
    • Matsuo, R.1    Misawakito, E.2
  • 24
    • 0036337915 scopus 로고    scopus 로고
    • A genomic view of alternative splicing
    • Modrek B., and Lee C. A genomic view of alternative splicing. Nat Genet 30 1 (2002) 13-19
    • (2002) Nat Genet , vol.30 , Issue.1 , pp. 13-19
    • Modrek, B.1    Lee, C.2
  • 25
    • 51249097242 scopus 로고    scopus 로고
    • Bindin genes of the Pacific oyster Crassostrea gigas
    • Moy G.W., and Vacquier V.D. Bindin genes of the Pacific oyster Crassostrea gigas. Gene 423 2 (2008) 215-220
    • (2008) Gene , vol.423 , Issue.2 , pp. 215-220
    • Moy, G.W.1    Vacquier, V.D.2
  • 26
    • 36348982700 scopus 로고    scopus 로고
    • Characterization of immune genes from the schistosome host snail Biomphalaria glabrata that encode peptidoglycan recognition proteins and gram-negative bacteria binding protein
    • Zhang S.M., Zeng Y., and Loker E.S. Characterization of immune genes from the schistosome host snail Biomphalaria glabrata that encode peptidoglycan recognition proteins and gram-negative bacteria binding protein. Immunogenetics 59 11 (2007) 883-898
    • (2007) Immunogenetics , vol.59 , Issue.11 , pp. 883-898
    • Zhang, S.M.1    Zeng, Y.2    Loker, E.S.3
  • 27
    • 1942519763 scopus 로고    scopus 로고
    • Identification and characterization of a novel C2B splice variant of synaptotagmin I
    • Nakhost A., Houeland G., Blandford V.E., Castellucci V.F., and Sossin W.S. Identification and characterization of a novel C2B splice variant of synaptotagmin I. J Neurochem 89 2 (2004) 354-363
    • (2004) J Neurochem , vol.89 , Issue.2 , pp. 354-363
    • Nakhost, A.1    Houeland, G.2    Blandford, V.E.3    Castellucci, V.F.4    Sossin, W.S.5
  • 28
    • 0041707780 scopus 로고    scopus 로고
    • Molecular cloning, structure and bait region splice variants of alpha2-macroglobulin from the soft tick Ornithodoros moubata
    • Saravanan T., Weise C., Sojka D., and Kopacek P. Molecular cloning, structure and bait region splice variants of alpha2-macroglobulin from the soft tick Ornithodoros moubata. Insect Biochem Mol Biol 33 8 (2003) 841-851
    • (2003) Insect Biochem Mol Biol , vol.33 , Issue.8 , pp. 841-851
    • Saravanan, T.1    Weise, C.2    Sojka, D.3    Kopacek, P.4
  • 29
    • 0141560434 scopus 로고    scopus 로고
    • Alternative splicing in the nervous system: an emerging source of diversity and regulation
    • Lee C.J., and Irizarry K. Alternative splicing in the nervous system: an emerging source of diversity and regulation. Biol Psychiatry 54 8 (2003) 771
    • (2003) Biol Psychiatry , vol.54 , Issue.8 , pp. 771
    • Lee, C.J.1    Irizarry, K.2
  • 30
    • 0034625260 scopus 로고    scopus 로고
    • Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity
    • Schmucker D., Clemens J.C., Shu H., Worby C.A., Xiao J., Muda M., et al. Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity. Cell 101 6 (2000) 671-684
    • (2000) Cell , vol.101 , Issue.6 , pp. 671-684
    • Schmucker, D.1    Clemens, J.C.2    Shu, H.3    Worby, C.A.4    Xiao, J.5    Muda, M.6
  • 31
    • 24944454976 scopus 로고    scopus 로고
    • Extensive diversity of Ig-superfamily proteins in the immune system of insects
    • Watson F.L., Puttmann-Holgado R., Thomas F., Lamar D.L., Hughes M., Kondo M., et al. Extensive diversity of Ig-superfamily proteins in the immune system of insects. Science 309 5742 (2005) 1874-1878
    • (2005) Science , vol.309 , Issue.5742 , pp. 1874-1878
    • Watson, F.L.1    Puttmann-Holgado, R.2    Thomas, F.3    Lamar, D.L.4    Hughes, M.5    Kondo, M.6
  • 32
    • 24944585768 scopus 로고    scopus 로고
    • Macroarray analysis of coelomocyte gene expression in response to LPS in the sea urchin. Identification of unexpected immune diversity in an invertebrate
    • Nair S.V., Del Valle H., Gross P.S., Terwilliger D.P., and Smith L.C. Macroarray analysis of coelomocyte gene expression in response to LPS in the sea urchin. Identification of unexpected immune diversity in an invertebrate. Physiol Genomics 22 1 (2005) 33-47
    • (2005) Physiol Genomics , vol.22 , Issue.1 , pp. 33-47
    • Nair, S.V.1    Del Valle, H.2    Gross, P.S.3    Terwilliger, D.P.4    Smith, L.C.5
  • 33
    • 33947690193 scopus 로고    scopus 로고
    • Distinctive expression patterns of 185/333 genes in the purple sea urchin, Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, beta-1,3-glucan, and dsRNA
    • Terwilliger D.P., Buckley K.M., Brockton V., Ritter N.J., and Smith L.C. Distinctive expression patterns of 185/333 genes in the purple sea urchin, Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, beta-1,3-glucan, and dsRNA. BMC Mol Biol 8 (2007) 16
    • (2007) BMC Mol Biol , vol.8 , pp. 16
    • Terwilliger, D.P.1    Buckley, K.M.2    Brockton, V.3    Ritter, N.J.4    Smith, L.C.5
  • 34
    • 34247197937 scopus 로고    scopus 로고
    • The nonsense-mediated decay RNA surveillance pathway
    • Chang Y.F., Imam J.S., and Wilkinson M.F. The nonsense-mediated decay RNA surveillance pathway. Annu Rev Biochem 76 (2007) 51-74
    • (2007) Annu Rev Biochem , vol.76 , pp. 51-74
    • Chang, Y.F.1    Imam, J.S.2    Wilkinson, M.F.3
  • 35
    • 0035823247 scopus 로고    scopus 로고
    • Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1
    • Lykke-Andersen J., Shu M.D., and Steitz J.A. Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1. Science 293 5536 (2001) 1836-1839
    • (2001) Science , vol.293 , Issue.5536 , pp. 1836-1839
    • Lykke-Andersen, J.1    Shu, M.D.2    Steitz, J.A.3
  • 36
    • 4944223388 scopus 로고    scopus 로고
    • Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes
    • Green R.E., Lewis B.P., Hillman R.T., Blanchette M., Lareau L.F., Garnett A.T., et al. Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes. Bioinformatics 19 Suppl. 1 (2003) i118-i121
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Green, R.E.1    Lewis, B.P.2    Hillman, R.T.3    Blanchette, M.4    Lareau, L.F.5    Garnett, A.T.6
  • 37
    • 0037422575 scopus 로고    scopus 로고
    • Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
    • Lewis B.P., Green R.E., and Brenner S.E. Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans. Proc Natl Acad Sci USA 100 1 (2003) 189-192
    • (2003) Proc Natl Acad Sci USA , vol.100 , Issue.1 , pp. 189-192
    • Lewis, B.P.1    Green, R.E.2    Brenner, S.E.3
  • 38
    • 0032435862 scopus 로고    scopus 로고
    • Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation
    • Lopez A.J. Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation. Annu Rev Genet 32 (1998) 279-305
    • (1998) Annu Rev Genet , vol.32 , pp. 279-305
    • Lopez, A.J.1
  • 39
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • Black D.L. Mechanisms of alternative pre-messenger RNA splicing. Annu Rev Biochem 72 (2003) 291-336
    • (2003) Annu Rev Biochem , vol.72 , pp. 291-336
    • Black, D.L.1
  • 40
    • 18344364099 scopus 로고    scopus 로고
    • Understanding alternative splicing: towards a cellular code
    • Matlin A.J., Clark F., and Smith C.W. Understanding alternative splicing: towards a cellular code. Nat Rev Mol Cell Biol 6 5 (2005) 386-398
    • (2005) Nat Rev Mol Cell Biol , vol.6 , Issue.5 , pp. 386-398
    • Matlin, A.J.1    Clark, F.2    Smith, C.W.3


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