-
1
-
-
0028670452
-
alpha 2-macroglobulin, complement, and biologic defense: antigens, growth factors, microbial proteases, and receptor ligation
-
PID: 7528831, COI: 1:CAS:528:DyaK2MXjs12gsLY%3D
-
Chu CT, Pizzo SV: alpha 2-macroglobulin, complement, and biologic defense: antigens, growth factors, microbial proteases, and receptor ligation. Lab Invest. 1994, 71: 792-812.
-
(1994)
Lab Invest
, vol.71
, pp. 792-812
-
-
Chu, C.T.1
Pizzo, S.V.2
-
2
-
-
0019567246
-
Further characterization of the covalent linking reaction of alpha 2-macroglobulin
-
PID: 6172116, COI: 1:CAS:528:DyaL3MXkslGlu7k%3D
-
Salvesen GS, Sayers CA, Barrett AJ: Further characterization of the covalent linking reaction of alpha 2-macroglobulin. Biochem J. 1981, 195: 453-461. DOI: 10.1042/bj1950453
-
(1981)
Biochem J
, vol.195
, pp. 453-461
-
-
Salvesen, G.S.1
Sayers, C.A.2
Barrett, A.J.3
-
3
-
-
0031043135
-
The internal thioester and the covalent binding properties of the complement proteins C3 and C4
-
PID: 9041627, COI: 1:CAS:528:DyaK2sXhvVOrtbs%3D
-
Law SK, Dodds AW: The internal thioester and the covalent binding properties of the complement proteins C3 and C4. Protein Sci. 1997, 6: 263-274. DOI: 10.1002/pro.5560060201
-
(1997)
Protein Sci
, vol.6
, pp. 263-274
-
-
Law, S.K.1
Dodds, A.W.2
-
4
-
-
0024333351
-
Alpha-macroglobulins: structure, shape, and mechanism of proteinase complex formation
-
PID: 2473064, COI: 1:CAS:528:DyaL1MXkslensbc%3D
-
Sottrup-Jensen L: Alpha-macroglobulins: structure, shape, and mechanism of proteinase complex formation. J Biol Chem. 1989, 264: 11539-11542.
-
(1989)
J Biol Chem
, vol.264
, pp. 11539-11542
-
-
Sottrup-Jensen, L.1
-
5
-
-
0034924843
-
The contribution of proteinase inhibitors to immune defense
-
PID: 11286692, COI: 1:CAS:528:DC%2BD3MXhslanur0%3D
-
Armstrong PB: The contribution of proteinase inhibitors to immune defense. Trends Immunol. 2001, 22: 47-52. 10.1016/S1471-4906(00)01803-2. DOI: 10.1016/S1471-4906(00)01803-2
-
(2001)
Trends Immunol
, vol.22
, pp. 47-52
-
-
Armstrong, P.B.1
-
6
-
-
0034797999
-
The C-terminal domain promotes the hemorrhagic damage caused by Vibrio vulnificusmetalloprotease
-
PID: 11600151, COI: 1:CAS:528:DC%2BD3MXntlKhtLc%3D
-
Miyoshi S, Kawata K, Tomochika K, Shinoda S, Yamamoto S: The C-terminal domain promotes the hemorrhagic damage caused by Vibrio vulnificus metalloprotease. Toxicon. 2001, 39: 1883-1886. 10.1016/S0041-0101(01)00171-4. DOI: 10.1016/S0041-0101(01)00171-4
-
(2001)
Toxicon
, vol.39
, pp. 1883-1886
-
-
Miyoshi, S.1
Kawata, K.2
Tomochika, K.3
Shinoda, S.4
Yamamoto, S.5
-
7
-
-
0346336793
-
Cryptobia (Trypanoplasma) salmositicaand salmonid cryptobiosis
-
PID: 14710756, COI: 1:STN:280:DC%2BD2c%2FhtlCntA%3D%3D
-
Woo PT: Cryptobia (Trypanoplasma) salmositica and salmonid cryptobiosis. J Fish Dis. 2003, 26: 627-646. 10.1046/j.1365-2761.2003.00500.x. DOI: 10.1046/j.1365-2761.2003.00500.x
-
(2003)
J Fish Dis
, vol.26
, pp. 627-646
-
-
Woo, P.T.1
-
8
-
-
18844465936
-
Interactions between cytokines and alpha 2-macroglobulin
-
PID: 1716108, COI: 1:CAS:528:DyaK38XkvFag
-
Chu CT, Pizzo SV: Interactions between cytokines and alpha 2-macroglobulin. Immunol Today. 1991, 12: 249- DOI: 10.1016/0167-5699(91)90043-S
-
(1991)
Immunol Today
, vol.12
, pp. 249
-
-
Chu, C.T.1
Pizzo, S.V.2
-
9
-
-
0028982266
-
Alpha 2-macroglobulin functions as a cytokine carrier to induce nitric oxide synthesis and cause nitric oxide-dependent cytotoxicity in the RAW 264.7 macrophage cell line
-
PID: 7545171, COI: 1:CAS:528:DyaK2MXotFaitr4%3D
-
Lysiak JJ, Hussaini IM, Webb DJ, Glass WF, Allietta M, Gonias SL: Alpha 2-macroglobulin functions as a cytokine carrier to induce nitric oxide synthesis and cause nitric oxide-dependent cytotoxicity in the RAW 264.7 macrophage cell line. J Biol Chem. 1995, 270: 21919-21927. 10.1074/jbc.270.37.21919. DOI: 10.1074/jbc.270.37.21919
-
(1995)
J Biol Chem
, vol.270
, pp. 21919-21927
-
-
Lysiak, J.J.1
Hussaini, I.M.2
Webb, D.J.3
Glass, W.F.4
Allietta, M.5
Gonias, S.L.6
-
10
-
-
0037519264
-
The NTR module: domains of netrins, secreted frizzled related proteins, and type I procollagen C-proteinase enhancer protein are homologous with tissue inhibitors of metalloproteases
-
PID: 10452607, COI: 1:CAS:528:DyaK1MXlt1Omu7w%3D
-
Banyai L, Patthy L: The NTR module: domains of netrins, secreted frizzled related proteins, and type I procollagen C-proteinase enhancer protein are homologous with tissue inhibitors of metalloproteases. Protein Sci. 1999, 8: 1636-1642. DOI: 10.1110/ps.8.8.1636
-
(1999)
Protein Sci
, vol.8
, pp. 1636-1642
-
-
Banyai, L.1
Patthy, L.2
-
11
-
-
0032586674
-
Alpha2-macroglobulin: an evolutionarily conserved arm of the innate immune system
-
PID: 10426429, COI: 1:CAS:528:DyaK1MXkvFart7c%3D
-
Armstrong PB, Quigley JP: Alpha2-macroglobulin: an evolutionarily conserved arm of the innate immune system. Dev Comp Immunol. 1999, 23: 375-390. 10.1016/S0145-305X(99)00018-X. DOI: 10.1016/S0145-305X(99)00018-X
-
(1999)
Dev Comp Immunol
, vol.23
, pp. 375-390
-
-
Armstrong, P.B.1
Quigley, J.P.2
-
12
-
-
0030577021
-
Localisation of the major reactive lysine residue involved in the self-crosslinking of proteinase-activated Limulusalpha 2-macroglobulin
-
PID: 8804419, COI: 1:CAS:528:DyaK28XlsFWktbo%3D
-
Dolmer K, Husted LB, Armstrong PB, Sottrup-Jensen L: Localisation of the major reactive lysine residue involved in the self-crosslinking of proteinase-activated Limulus alpha 2-macroglobulin. FEBS Lett. 1996, 393: 37-40. 10.1016/0014-5793(96)00852-6. DOI: 10.1016/0014-5793(96)00852-6
-
(1996)
FEBS Lett
, vol.393
, pp. 37-40
-
-
Dolmer, K.1
Husted, L.B.2
Armstrong, P.B.3
Sottrup-Jensen, L.4
-
13
-
-
0037020201
-
Immunity-related genes and gene families in Anopheles gambiae
-
PID: 12364793, COI: 1:CAS:528:DC%2BD38XnsFSgsr0%3D
-
Christophides GK, Zdobnov E, Barillas-Mury C, Birney E, Blandin S, Blass C, Brey PT, Collins FH, Danielli A, Dimopoulos G, et al: Immunity-related genes and gene families in Anopheles gambiae. Science. 2002, 298: 159-165. 10.1126/science.1077136. DOI: 10.1126/science.1077136
-
(2002)
Science
, vol.298
, pp. 159-165
-
-
Christophides, G.K.1
Zdobnov, E.2
Barillas-Mury, C.3
Birney, E.4
Blandin, S.5
Blass, C.6
Brey, P.T.7
Collins, F.H.8
Danielli, A.9
Dimopoulos, G.10
-
14
-
-
0035831034
-
Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito, Anopheles gambiae
-
PID: 11257225, COI: 1:CAS:528:DC%2BD3MXitFakur8%3D
-
Levashina EA, Moita LF, Blandin S, Vriend G, Lagueux M, Kafatos FC: Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito, Anopheles gambiae. Cell. 2001, 104: 709-718. DOI: 10.1016/S0092-8674(01)00267-7
-
(2001)
Cell
, vol.104
, pp. 709-718
-
-
Levashina, E.A.1
Moita, L.F.2
Blandin, S.3
Vriend, G.4
Lagueux, M.5
Kafatos, F.C.6
-
15
-
-
1542328964
-
Complement-like protein TEP1 is a determinant of vectorial capacity in the malaria vector Anopheles gambiae
-
PID: 15006349, COI: 1:CAS:528:DC%2BD2cXitFKisL8%3D
-
Blandin S, Shiao S-H, Moita LF, Janse CJ, Waters AP, Kafatos FC, Levashina EA: Complement-like protein TEP1 is a determinant of vectorial capacity in the malaria vector Anopheles gambiae. Cell. 2004, 116: 661-670. 10.1016/S0092-8674(04)00173-4. DOI: 10.1016/S0092-8674(04)00173-4
-
(2004)
Cell
, vol.116
, pp. 661-670
-
-
Blandin, S.1
Shiao, S.-H.2
Moita, L.F.3
Janse, C.J.4
Waters, A.P.5
Kafatos, F.C.6
Levashina, E.A.7
-
16
-
-
0346157328
-
Thioester-containing proteins and insect immunity
-
PID: 14698229, COI: 1:CAS:528:DC%2BD3sXpvFens70%3D
-
Blandin S, Levashina EA: Thioester-containing proteins and insect immunity. Mol Immunol. 2004, 40: 903-908. 10.1016/j.molimm.2003.10.010. DOI: 10.1016/j.molimm.2003.10.010
-
(2004)
Mol Immunol
, vol.40
, pp. 903-908
-
-
Blandin, S.1
Levashina, E.A.2
-
17
-
-
0037044719
-
Aminoacylation of the N-terminal cysteine is essential for Lol-dependent release of lipoproteins from membranes but does not depend on lipoprotein sorting signals
-
PID: 12198129, COI: 1:CAS:528:DC%2BD38Xos1emtrg%3D
-
Fukuda A, Matsuyama S, Hara T, Nakayama J, Nagasawa H, Tokuda H: Aminoacylation of the N-terminal cysteine is essential for Lol-dependent release of lipoproteins from membranes but does not depend on lipoprotein sorting signals. J Biol Chem. 2002, 277: 43512-43518. 10.1074/jbc.M206816200. DOI: 10.1074/jbc.M206816200
-
(2002)
J Biol Chem
, vol.277
, pp. 43512-43518
-
-
Fukuda, A.1
Matsuyama, S.2
Hara, T.3
Nakayama, J.4
Nagasawa, H.5
Tokuda, H.6
-
18
-
-
0024279918
-
A single amino acid determinant of the membrane localization of lipoproteins in E. coli
-
PID: 3284654, COI: 1:CAS:528:DyaL1cXkt1Sjs78%3D
-
Yamaguchi K, Yu F, Inouye M: A single amino acid determinant of the membrane localization of lipoproteins in E. coli. Cell. 1988, 53: 423-432. 10.1016/0092-8674(88)90162-6. DOI: 10.1016/0092-8674(88)90162-6
-
(1988)
Cell
, vol.53
, pp. 423-432
-
-
Yamaguchi, K.1
Yu, F.2
Inouye, M.3
-
19
-
-
0020617810
-
Ovostatin: a novel proteinase inhibitor from chicken egg white. II. Mechanism of inhibition studied with collagenase and thermolysin
-
PID: 6305943, COI: 1:CAS:528:DyaL3sXks1Kmsbw%3D
-
Nagase H, Harris ED: Ovostatin: a novel proteinase inhibitor from chicken egg white. II. Mechanism of inhibition studied with collagenase and thermolysin. J Biol Chem. 1983, 258: 7490-7498.
-
(1983)
J Biol Chem
, vol.258
, pp. 7490-7498
-
-
Nagase, H.1
Harris, E.D.2
-
20
-
-
0038610618
-
The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus
-
PID: 12810954, COI: 1:CAS:528:DC%2BD3sXlt1Wqtro%3D
-
Suerbaum S, Josenhans C, Sterzenbach T, Drescher B, Brandt P, Bell M, Droge M, Fartmann B, Fischer HP, Ge Z, et al: The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus. Proc Natl Acad Sci USA. 2003, 100: 7901-7906. 10.1073/pnas.1332093100. DOI: 10.1073/pnas.1332093100
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 7901-7906
-
-
Suerbaum, S.1
Josenhans, C.2
Sterzenbach, T.3
Drescher, B.4
Brandt, P.5
Bell, M.6
Droge, M.7
Fartmann, B.8
Fischer, H.P.9
Ge, Z.10
-
21
-
-
0037250152
-
STRING: a database of predicted functional associations between proteins
-
PID: 12519996, COI: 1:CAS:528:DC%2BD3sXhvFSmsrg%3D
-
von Mering C, Huynen M, Jaeggi D, Schmidt S, Bork P, Snel B: STRING: a database of predicted functional associations between proteins. Nucleic Acids Res. 2003, 31: 258-261. 10.1093/nar/gkg034. DOI: 10.1093/nar/gkg034
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 258-261
-
-
von Mering, C.1
Huynen, M.2
Jaeggi, D.3
Schmidt, S.4
Bork, P.5
Snel, B.6
-
22
-
-
0033055062
-
The use of gene clusters to infer functional coupling
-
PID: 10077608, COI: 1:CAS:528:DyaK1MXhvFyks7s%3D
-
Overbeek R, Fonstein M, D'Souza M, Pusch GD, Maltsev N: The use of gene clusters to infer functional coupling. Proc Natl Acad Sci USA. 1999, 96: 2896-2901. 10.1073/pnas.96.6.2896. DOI: 10.1073/pnas.96.6.2896
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 2896-2901
-
-
Overbeek, R.1
Fonstein, M.2
D'Souza, M.3
Pusch, G.D.4
Maltsev, N.5
-
23
-
-
0032169271
-
Conservation of gene order: a fingerprint of proteins that physically interact
-
PID: 9787636, COI: 1:CAS:528:DyaK1cXmsVWmtrw%3D
-
Dandekar T, Snel B, Huynen M, Bork P: Conservation of gene order: a fingerprint of proteins that physically interact. Trends Biochem Sci. 1998, 23: 324-328. 10.1016/S0968-0004(98)01274-2. DOI: 10.1016/S0968-0004(98)01274-2
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 324-328
-
-
Dandekar, T.1
Snel, B.2
Huynen, M.3
Bork, P.4
-
24
-
-
0031736387
-
Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs
-
PID: 9841666, COI: 1:CAS:528:DyaK1MXhs1Oguw%3D%3D
-
Goffin C, Ghuysen JM: Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs. Microbiol Mol Biol Rev. 1998, 62: 1079-1093.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 1079-1093
-
-
Goffin, C.1
Ghuysen, J.M.2
-
25
-
-
0040205694
-
Cloning and characterization of PBP 1C, a third member of the multimodular class A penicillin-binding proteins of Escherichia coli
-
PID: 10542235, COI: 1:CAS:528:DyaK1MXnt12jtrY%3D
-
Schiffer G, Holtje JV: Cloning and characterization of PBP 1C, a third member of the multimodular class A penicillin-binding proteins of Escherichia coli. J Biol Chem. 1999, 274: 32031-32039. 10.1074/jbc.274.45.32031. DOI: 10.1074/jbc.274.45.32031
-
(1999)
J Biol Chem
, vol.274
, pp. 32031-32039
-
-
Schiffer, G.1
Holtje, J.V.2
-
26
-
-
0037249405
-
The Stanford Microarray Database: data access and quality assessment tools
-
PID: 12519956, COI: 1:CAS:528:DC%2BD3sXhvFSnsrY%3D
-
Gollub J, Ball CA, Binkley G, Demeter J, Finkelstein DB, Hebert JM, Hernandez-Boussard T, Jin H, Kaloper M, Matese JC, et al: The Stanford Microarray Database: data access and quality assessment tools. Nucleic Acids Res. 2003, 31: 94-96. 10.1093/nar/gkg078. DOI: 10.1093/nar/gkg078
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 94-96
-
-
Gollub, J.1
Ball, C.A.2
Binkley, G.3
Demeter, J.4
Finkelstein, D.B.5
Hebert, J.M.6
Hernandez-Boussard, T.7
Jin, H.8
Kaloper, M.9
Matese, J.C.10
-
27
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
PID: 11524383, COI: 1:STN:280:DC%2BD3MvotV2isw%3D%3D
-
Huelsenbeck JP, Ronquist F: MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001, 17: 754-755. 10.1093/bioinformatics/17.8.754. DOI: 10.1093/bioinformatics/17.8.754
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
28
-
-
0031774059
-
GeneTree: comparing gene and species phylogenies using reconciled trees
-
PID: 9918954, COI: 1:CAS:528:DyaK1MXktlCltA%3D%3D
-
Page RD: GeneTree: comparing gene and species phylogenies using reconciled trees. Bioinformatics. 1998, 14: 819-820. 10.1093/bioinformatics/14.9.819. DOI: 10.1093/bioinformatics/14.9.819
-
(1998)
Bioinformatics
, vol.14
, pp. 819-820
-
-
Page, R.D.1
-
29
-
-
0032987152
-
Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana
-
PID: 10049872, COI: 1:CAS:528:DyaK1MXhslWktbo%3D
-
Cottrell MT, Cary SC: Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana. Appl Environ Microbiol. 1999, 65: 1127-1132.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 1127-1132
-
-
Cottrell, M.T.1
Cary, S.C.2
-
30
-
-
0000582520
-
Pattern of development of Anabaena in Azolla-Anabaenasymbiosis
-
PID: 24435967, COI: 1:STN:280:DC%2BC2czmsVCmsw%3D%3D
-
Hill DJ: Pattern of development of Anabaena in Azolla-Anabaena symbiosis. Planta. 1975, 122: 179-184. DOI: 10.1007/BF00388657
-
(1975)
Planta
, vol.122
, pp. 179-184
-
-
Hill, D.J.1
-
31
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
PID: 11237011, COI: 1:CAS:528:DC%2BD3MXhsFCjtLc%3D
-
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, et al: Initial sequencing and analysis of the human genome. Nature. 2001, 409: 860-921. 10.1038/35057062. DOI: 10.1038/35057062
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
-
32
-
-
0035827328
-
Microbial genes in the human genome: lateral transfer or gene loss?
-
PID: 11358996, COI: 1:CAS:528:DC%2BD3MXksVaqtbc%3D
-
Salzberg SL, White O, Peterson J, Eisen JA: Microbial genes in the human genome: lateral transfer or gene loss?. Science. 2001, 292: 1903-1906. 10.1126/science.1061036. DOI: 10.1126/science.1061036
-
(2001)
Science
, vol.292
, pp. 1903-1906
-
-
Salzberg, S.L.1
White, O.2
Peterson, J.3
Eisen, J.A.4
-
33
-
-
0035927649
-
Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates
-
PID: 11418856, COI: 1:CAS:528:DC%2BD3MXkvVWhurk%3D
-
Stanhope MJ, Lupas A, Italia MJ, Koretke KK, Volker C, Brown JR: Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates. Nature. 2001, 411: 940-944. 10.1038/35082058. DOI: 10.1038/35082058
-
(2001)
Nature
, vol.411
, pp. 940-944
-
-
Stanhope, M.J.1
Lupas, A.2
Italia, M.J.3
Koretke, K.K.4
Volker, C.5
Brown, J.R.6
-
34
-
-
0037383272
-
Much ado about bacteria-to-vertebrate lateral gene transfer
-
PID: 12683971, COI: 1:CAS:528:DC%2BD3sXis12ns7o%3D
-
Genereux DP, Logsdon JM: Much ado about bacteria-to-vertebrate lateral gene transfer. Trends Genet. 2003, 19: 191-195. 10.1016/S0168-9525(03)00055-6. DOI: 10.1016/S0168-9525(03)00055-6
-
(2003)
Trends Genet
, vol.19
, pp. 191-195
-
-
Genereux, D.P.1
Logsdon, J.M.2
-
35
-
-
0035546223
-
Detection of lateral gene transfer among microbial genomes
-
PID: 11682304, COI: 1:CAS:528:DC%2BD3MXnslajt7k%3D
-
Ragan MA: Detection of lateral gene transfer among microbial genomes. Curr Opin Genet Dev. 2001, 11: 620-626. 10.1016/S0959-437X(00)00244-6. DOI: 10.1016/S0959-437X(00)00244-6
-
(2001)
Curr Opin Genet Dev
, vol.11
, pp. 620-626
-
-
Ragan, M.A.1
-
36
-
-
0242321088
-
Pathogenicity islands and phages in Vibrio choleraeevolution
-
PID: 14607067, COI: 1:CAS:528:DC%2BD3sXos12ktr8%3D
-
Faruque SM, Mekalanos JJ: Pathogenicity islands and phages in Vibrio cholerae evolution. Trends Microbiol. 2003, 11: 505-510. 10.1016/j.tim.2003.09.003. DOI: 10.1016/j.tim.2003.09.003
-
(2003)
Trends Microbiol
, vol.11
, pp. 505-510
-
-
Faruque, S.M.1
Mekalanos, J.J.2
-
37
-
-
0030057090
-
Lysogenic conversion by a filamentous phage encoding cholera toxin
-
PID: 8658163, COI: 1:CAS:528:DyaK28XjvVOis78%3D
-
Waldor MK, Mekalanos JJ: Lysogenic conversion by a filamentous phage encoding cholera toxin. Science. 1996, 272: 1910-1914. DOI: 10.1126/science.272.5270.1910
-
(1996)
Science
, vol.272
, pp. 1910-1914
-
-
Waldor, M.K.1
Mekalanos, J.J.2
-
38
-
-
0037022337
-
Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease
-
PID: 11818571, COI: 1:CAS:528:DC%2BD38Xht1Cltr0%3D
-
Dziejman M, Balon E, Boyd D, Fraser CM, Heidelberg JF, Mekalanos JJ: Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease. Proc Natl Acad Sci USA. 2002, 99: 1556-1561. 10.1073/pnas.042667999. DOI: 10.1073/pnas.042667999
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 1556-1561
-
-
Dziejman, M.1
Balon, E.2
Boyd, D.3
Fraser, C.M.4
Heidelberg, J.F.5
Mekalanos, J.J.6
-
39
-
-
0028847868
-
Genesis of the novel epidemic Vibrio cholerae O139 strain: evidence for horizontal transfer of genes involved in polysaccharide synthesis
-
PID: 7835331, COI: 1:CAS:528:DyaK2MXjslaiu70%3D
-
Bik EM, Bunschoten AE, Gouw RD, Mooi FR: Genesis of the novel epidemic Vibrio cholerae O139 strain: evidence for horizontal transfer of genes involved in polysaccharide synthesis. EMBO J. 1995, 14: 209-216.
-
(1995)
EMBO J
, vol.14
, pp. 209-216
-
-
Bik, E.M.1
Bunschoten, A.E.2
Gouw, R.D.3
Mooi, F.R.4
-
40
-
-
0040370656
-
Protein GRAB of Streptococcus pyogenesregulates proteolysis at the bacterial surface by binding alpha2-macroglobulin
-
PID: 10336419, COI: 1:CAS:528:DyaK1MXjsV2gsr4%3D
-
Rasmussen M, Müller HP, Björck L: Protein GRAB of Streptococcus pyogenes regulates proteolysis at the bacterial surface by binding alpha2-macroglobulin. J Biol Chem. 1999, 274: 15336-15344. 10.1074/jbc.274.22.15336. DOI: 10.1074/jbc.274.22.15336
-
(1999)
J Biol Chem
, vol.274
, pp. 15336-15344
-
-
Rasmussen, M.1
Müller, H.P.2
Björck, L.3
-
41
-
-
0024451422
-
Ig-binding bacterial proteins also bind proteinase inhibitors
-
PID: 2478629, COI: 1:STN:280:DyaK3c%2FjvVGhug%3D%3D
-
Sjobring U, Trojnar J, Grubb A, Akerstrom B, Björck L: Ig-binding bacterial proteins also bind proteinase inhibitors. J Immunol. 1989, 143: 2948-2954.
-
(1989)
J Immunol
, vol.143
, pp. 2948-2954
-
-
Sjobring, U.1
Trojnar, J.2
Grubb, A.3
Akerstrom, B.4
Björck, L.5
-
42
-
-
0141450720
-
Antimicrobial properties of lysozyme in relation to foodborne vegetative bacteria
-
PID: 14582617, COI: 1:CAS:528:DC%2BD3sXosFyks7w%3D
-
Masschalck B, Michiels CW: Antimicrobial properties of lysozyme in relation to foodborne vegetative bacteria. Crit Rev Microbiol. 2003, 29: 191-214. DOI: 10.1080/713610448
-
(2003)
Crit Rev Microbiol
, vol.29
, pp. 191-214
-
-
Masschalck, B.1
Michiels, C.W.2
-
43
-
-
0842304596
-
Antimicrobial polypeptides
-
PID: 12960278
-
Ganz T: Antimicrobial polypeptides. J Leukoc Biol. 2003, 75: 34-38. 10.1189/jlb.0403150. DOI: 10.1189/jlb.0403150
-
(2003)
J Leukoc Biol
, vol.75
, pp. 34-38
-
-
Ganz, T.1
-
44
-
-
0037613601
-
Towards antibacterial strategies: studies on the mechanisms of interaction between antibacterial peptides and model membranes
-
PID: 12803879, COI: 1:CAS:528:DC%2BD3sXksl2lsLk%3D
-
Wiese A, Gutsmann T, Seydel U: Towards antibacterial strategies: studies on the mechanisms of interaction between antibacterial peptides and model membranes. J Endotoxin Res. 2003, 9: 67-84. 10.1179/096805103125001441.
-
(2003)
J Endotoxin Res
, vol.9
, pp. 67-84
-
-
Wiese, A.1
Gutsmann, T.2
Seydel, U.3
-
45
-
-
0035947615
-
Escherichia coli ykfEORFan gene encodes a potent inhibitor of C-type lysozyme
-
PID: 11278658, COI: 1:CAS:528:DC%2BD3MXktFWmtLw%3D
-
Monchois V, Abergel C, Sturgis J, Jeudy S, Claverie JM: Escherichia coli ykfE ORFan gene encodes a potent inhibitor of C-type lysozyme. J Biol Chem. 2001, 276: 18437-18441. 10.1074/jbc.M010297200. DOI: 10.1074/jbc.M010297200
-
(2001)
J Biol Chem
, vol.276
, pp. 18437-18441
-
-
Monchois, V.1
Abergel, C.2
Sturgis, J.3
Jeudy, S.4
Claverie, J.M.5
-
46
-
-
0037255072
-
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
-
PID: 12520024, COI: 1:CAS:528:DC%2BD3sXhvFSmtL0%3D
-
Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, et al: The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res. 2003, 31: 365-370. 10.1093/nar/gkg095. DOI: 10.1093/nar/gkg095
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 365-370
-
-
Boeckmann, B.1
Bairoch, A.2
Apweiler, R.3
Blatter, M.C.4
Estreicher, A.5
Gasteiger, E.6
Martin, M.J.7
Michoud, K.8
O'Donovan, C.9
Phan, I.10
-
48
-
-
0041620156
-
BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases
-
PID: 12824420, COI: 1:CAS:528:DC%2BD3sXltVWjtr8%3D
-
Bimpikis K, Budd A, Linding R, Gibson TJ: BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases. Nucleic Acids Res. 2003, 31: 3792-3794. 10.1093/nar/gkg535. DOI: 10.1093/nar/gkg535
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3792-3794
-
-
Bimpikis, K.1
Budd, A.2
Linding, R.3
Gibson, T.J.4
-
49
-
-
0028013177
-
Improved sensitivity of profile searches through the use of sequence weights and gap excision
-
PID: 8193951, COI: 1:CAS:528:DyaK2cXksFKls7g%3D
-
Thompson JD, Higgins DG, Gibson TJ: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Comput Appl Biosci. 1994, 10: 19-29.
-
(1994)
Comput Appl Biosci
, vol.10
, pp. 19-29
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
50
-
-
85182710607
-
-
BIC web home page. [http://eta.embl-heidelberg.de:8000]
-
BIC Web Home Page
-
-
-
51
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
PID: 9254694, COI: 1:CAS:528:DyaK2sXlvFyhu7w%3D
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25: 3389-3402. 10.1093/nar/25.17.3389. DOI: 10.1093/nar/25.17.3389
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
52
-
-
0037252705
-
Database resources of the National Center for Biotechnology
-
PID: 12519941, COI: 1:CAS:528:DC%2BD3sXhvFSgu7w%3D
-
Wheeler DL, Church DM, Federhen S, Lash AE, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Tatusova TA, Wagner L: Database resources of the National Center for Biotechnology. Nucleic Acids Res. 2003, 31: 28-33. 10.1093/nar/gkg033. DOI: 10.1093/nar/gkg033
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 28-33
-
-
Wheeler, D.L.1
Church, D.M.2
Federhen, S.3
Lash, A.E.4
Madden, T.L.5
Pontius, J.U.6
Schuler, G.D.7
Schriml, L.M.8
Sequeira, E.9
Tatusova, T.A.10
Wagner, L.11
-
53
-
-
85182667340
-
-
NCBI BLAST
-
NCBI BLAST. [http://www.ncbi.nlm.nih.gov/BLAST]
-
-
-
-
55
-
-
18644368714
-
The Bioperl toolkit: Perl modules for the life sciences
-
PID: 12368254, COI: 1:CAS:528:DC%2BD38XotVKgtbY%3D
-
Stajich JE, Block D, Boulez K, Brenner SE, Chervitz SA, Dagdigian C, Fuellen G, Gilbert JG, Korf I, Lapp H, et al: The Bioperl toolkit: Perl modules for the life sciences. Genome Res. 2002, 12: 1611-1618. 10.1101/gr.361602. DOI: 10.1101/gr.361602
-
(2002)
Genome Res
, vol.12
, pp. 1611-1618
-
-
Stajich, J.E.1
Block, D.2
Boulez, K.3
Brenner, S.E.4
Chervitz, S.A.5
Dagdigian, C.6
Fuellen, G.7
Gilbert, J.G.8
Korf, I.9
Lapp, H.10
-
56
-
-
0033635022
-
Artemis: sequence visualization and annotation
-
PID: 11120685, COI: 1:CAS:528:DC%2BD3MXjvVWksw%3D%3D
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B: Artemis: sequence visualization and annotation. Bioinformatics. 2000, 16: 944-945. 10.1093/bioinformatics/16.10.944. DOI: 10.1093/bioinformatics/16.10.944
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
57
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
PID: 12824352, COI: 1:CAS:528:DC%2BD3sXltVWjsrg%3D
-
Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 2003, 31: 3497-3500. 10.1093/nar/gkg500. DOI: 10.1093/nar/gkg500
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
58
-
-
0030464460
-
SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny
-
PID: 9021275, COI: 1:CAS:528:DyaK2sXhtlWktLw%3D
-
Galtier N, Gouy M, Gautier C: SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci. 1996, 12: 543-548.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 543-548
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
59
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
PID: 3447015, COI: 1:STN:280:DyaL1c7ovFSjsA%3D%3D
-
Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 1987, 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
60
-
-
77956871959
-
-
Gblocks server. [http://woody.embl-heidelberg.de/phylo/index.html]
-
Gblocks Server
-
-
-
61
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
PID: 10742046, COI: 1:CAS:528:DC%2BD3cXisVSgt7g%3D
-
Castresana J: Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol. 2000, 17: 540-552. DOI: 10.1093/oxfordjournals.molbev.a026334
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
62
-
-
0036205377
-
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
-
PID: 11934758, COI: 1:CAS:528:DC%2BD38XivFKrsL0%3D
-
Schmidt HA, Strimmer K, Vingron M, von Haeseler A: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics. 2002, 18: 502-504. 10.1093/bioinformatics/18.3.502. DOI: 10.1093/bioinformatics/18.3.502
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
63
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
PID: 1633570, COI: 1:CAS:528:DyaK38Xlt1Okt7w%3D
-
Jones DT, Taylor WR, Thornton JM: The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci. 1992, 8: 275-282.
-
(1992)
Comput Appl Biosci
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
64
-
-
0029853148
-
WWW-query: an on-line retrieval system for biological sequence banks
-
PID: 8905155, COI: 1:CAS:528:DyaK28XmvVCmuro%3D
-
Perriere G, Gouy M: WWW-query: an on-line retrieval system for biological sequence banks. Biochimie. 1996, 78: 364-369. 10.1016/0300-9084(96)84768-7. DOI: 10.1016/0300-9084(96)84768-7
-
(1996)
Biochimie
, vol.78
, pp. 364-369
-
-
Perriere, G.1
Gouy, M.2
-
65
-
-
85182686409
-
-
SMD: home page. [http://genome-www.stanford.edu/microarray]
-
SMD: Home Page
-
-
-
66
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
PID: 9396791, COI: 1:CAS:528:DyaK1cXntFyntQ%3D%3D
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG: The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997, 25: 4876-4882. 10.1093/nar/25.24.4876. DOI: 10.1093/nar/25.24.4876
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
|