-
1
-
-
0027083350
-
A novel DNAbinding protein with regulatory and protective roles in starved Escherichia coli
-
Almiron M, Link AJ, Furlong D, Kolter R (1992) A novel DNAbinding protein with regulatory and protective roles in starved Escherichia coli. Genes Dev 6: 2646-2654
-
(1992)
Genes Dev
, vol.6
, pp. 2646-2654
-
-
Almiron, M.1
Link, A.J.2
Furlong, D.3
Kolter, R.4
-
2
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006
-
(2006)
Mol Syst Biol
, vol.2
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
3
-
-
1942537173
-
-
Catanzariti AM, Soboleva TA, Jans DA, Board Baker RT (2004) An efficient system for high-level expression and easy purification of authentic recombinant proteins. Protein Sci 13: 1331-1339
-
Catanzariti AM, Soboleva TA, Jans DA, Board PG, Baker RT (2004) An efficient system for high-level expression and easy purification of authentic recombinant proteins. Protein Sci 13: 1331-1339
-
-
-
-
4
-
-
10244243805
-
DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus
-
Ceci P, Cellai S, Falvo E, Rivetti C, Rossi GL, Chiancone E (2004) DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus. Nucleic Acids Res 32: 5935-5944
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5935-5944
-
-
Ceci, P.1
Cellai, S.2
Falvo, E.3
Rivetti, C.4
Rossi, G.L.5
Chiancone, E.6
-
5
-
-
0036810483
-
Protein folding and degradation in bacteria: To degrade or not to degrade? That is the question
-
Dougan DA, Mogk A, Bukau B (2002a) Protein folding and degradation in bacteria: to degrade or not to degrade? That is the question. Cell Mol Life Sci 59: 1607-1616
-
(2002)
Cell Mol Life Sci
, vol.59
, pp. 1607-1616
-
-
Dougan, D.A.1
Mogk, A.2
Bukau, B.3
-
6
-
-
0036210995
-
ClpS, a substrate modulator of the ClpAP machine
-
Dougan DA, Reid BG, Horwich AL, Bukau B (2002b) ClpS, a substrate modulator of the ClpAP machine. Mol Cell 9: 673-683
-
(2002)
Mol Cell
, vol.9
, pp. 673-683
-
-
Dougan, D.A.1
Reid, B.G.2
Horwich, A.L.3
Bukau, B.4
-
7
-
-
32544432878
-
ClpS is an essential component of the N-end rule pathway in Escherichia coli
-
Erbse A, Schmidt R, Bornemann T, Schneider-Mergener J, Mogk A, Zahn R, Dougan DA, Bukau B (2006) ClpS is an essential component of the N-end rule pathway in Escherichia coli. Nature 439: 753-756
-
(2006)
Nature
, vol.439
, pp. 753-756
-
-
Erbse, A.1
Schmidt, R.2
Bornemann, T.3
Schneider-Mergener, J.4
Mogk, A.5
Zahn, R.6
Dougan, D.A.7
Bukau, B.8
-
8
-
-
40749142482
-
Conserved residues in the N-domain of the AAA+ chaperone ClpA regulate substrate recognition and unfolding
-
Erbse AH, Wagner JN, Truscott KN, Spall SK, Kirstein J, Zeth K, Turgay K, Mogk A, Bukau B, Dougan DA (2008) Conserved residues in the N-domain of the AAA+ chaperone ClpA regulate substrate recognition and unfolding. FEBS J 275: 1400-1410
-
(2008)
FEBS J
, vol.275
, pp. 1400-1410
-
-
Erbse, A.H.1
Wagner, J.N.2
Truscott, K.N.3
Spall, S.K.4
Kirstein, J.5
Zeth, K.6
Turgay, K.7
Mogk, A.8
Bukau, B.9
Dougan, D.A.10
-
9
-
-
4444377383
-
Modulating substrate choice: The SspB adaptor delivers a regulator of the extracytoplasmic-stress response to the AAA+ protease ClpXP for degradation
-
Flynn JM, Levchenko I, Sauer RT, Baker TA (2004) Modulating substrate choice: the SspB adaptor delivers a regulator of the extracytoplasmic-stress response to the AAA+ protease ClpXP for degradation. Genes Dev 18: 2292-2301
-
(2004)
Genes Dev
, vol.18
, pp. 2292-2301
-
-
Flynn, J.M.1
Levchenko, I.2
Sauer, R.T.3
Baker, T.A.4
-
10
-
-
0037351068
-
Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals
-
Flynn JM, Neher SB, Kim YI, Sauer RT, Baker TA (2003) Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals. Mol Cell 11: 671-683
-
(2003)
Mol Cell
, vol.11
, pp. 671-683
-
-
Flynn, J.M.1
Neher, S.B.2
Kim, Y.I.3
Sauer, R.T.4
Baker, T.A.5
-
11
-
-
33845993905
-
The proteomics of N-terminal methionine cleavage
-
Frottin F, Martinez A, Peynot P, Mitra S, Holz RC, Giglione C, Meinnel T (2006) The proteomics of N-terminal methionine cleavage. Mol Cell Proteomics 5: 2336-2349
-
(2006)
Mol Cell Proteomics
, vol.5
, pp. 2336-2349
-
-
Frottin, F.1
Martinez, A.2
Peynot, P.3
Mitra, S.4
Holz, R.C.5
Giglione, C.6
Meinnel, T.7
-
12
-
-
0029155041
-
Decrease in cell viability due to the accumulation of spermidine in spermidine acetyltransferase-deficient mutant of Escherichia coli
-
Fukuchi J, Kashiwagi K, Yamagishi M, Ishihama A, Igarashi K (1995) Decrease in cell viability due to the accumulation of spermidine in spermidine acetyltransferase-deficient mutant of Escherichia coli. J Biol Chem 270: 18831-18835
-
(1995)
J Biol Chem
, vol.270
, pp. 18831-18835
-
-
Fukuchi, J.1
Kashiwagi, K.2
Yamagishi, M.3
Ishihama, A.4
Igarashi, K.5
-
13
-
-
0034596991
-
Subunitspecific degradation of the UmuD/D' heterodimer by the ClpXP protease: The role of trans recognition in UmuD' stability
-
Gonzalez M, Rasulova F, Maurizi MR, Woodgate R (2000) Subunitspecific degradation of the UmuD/D' heterodimer by the ClpXP protease: the role of trans recognition in UmuD' stability. EMBO J 19: 5251-5258
-
(2000)
EMBO J
, vol.19
, pp. 5251-5258
-
-
Gonzalez, M.1
Rasulova, F.2
Maurizi, M.R.3
Woodgate, R.4
-
14
-
-
0038690474
-
Regulation by proteolysis in bacterial cells
-
Jenal U, Hengge-Aronis R (2003) Regulation by proteolysis in bacterial cells. Curr Opin Microbiol 6: 163-172
-
(2003)
Curr Opin Microbiol
, vol.6
, pp. 163-172
-
-
Jenal, U.1
Hengge-Aronis, R.2
-
15
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
16
-
-
0037287864
-
Bioinformatic analysis of ClpS, a protein module involved in prokaryotic and eukaryotic protein degradation
-
Lupas AN, Koretke KK (2003) Bioinformatic analysis of ClpS, a protein module involved in prokaryotic and eukaryotic protein degradation. J Struct Biol 141: 77-83
-
(2003)
J Struct Biol
, vol.141
, pp. 77-83
-
-
Lupas, A.N.1
Koretke, K.K.2
-
17
-
-
0030811135
-
Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps
-
Martinez A, Kolter R (1997) Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps. J Bacteriol 179: 5188-5194
-
(1997)
J Bacteriol
, vol.179
, pp. 5188-5194
-
-
Martinez, A.1
Kolter, R.2
-
18
-
-
33947713897
-
The N-end rule pathway for regulated proteolysis: Prokaryotic and eukaryotic strategies
-
Mogk A, Schmidt R, Bukau B (2007) The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies. Trends Cell Biol 17: 165-172
-
(2007)
Trends Cell Biol
, vol.17
, pp. 165-172
-
-
Mogk, A.1
Schmidt, R.2
Bukau, B.3
-
19
-
-
3042662444
-
Dps protects cells against multiple stresses during stationary phase
-
Nair S, Finkel SE (2004) Dps protects cells against multiple stresses during stationary phase. J Bacteriol 186: 4192-4198
-
(2004)
J Bacteriol
, vol.186
, pp. 4192-4198
-
-
Nair, S.1
Finkel, S.E.2
-
20
-
-
0035912183
-
Degradation of a cohesin subunit by the N-end rule pathway is essential for chromosome stability
-
Rao H, Uhlmann F, Nasmyth K, Varshavsky A (2001) Degradation of a cohesin subunit by the N-end rule pathway is essential for chromosome stability. Nature 410: 955-959
-
(2001)
Nature
, vol.410
, pp. 955-959
-
-
Rao, H.1
Uhlmann, F.2
Nasmyth, K.3
Varshavsky, A.4
-
21
-
-
50149086108
-
Diversity of degradation signals in the ubiquitin-proteasome system
-
Ravid T, Hochstrasser M (2008) Diversity of degradation signals in the ubiquitin-proteasome system. Nat Rev Mol Cell Biol 9: 679-690
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 679-690
-
-
Ravid, T.1
Hochstrasser, M.2
-
23
-
-
0023472472
-
Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
-
Schagger H, von Jagow G (1987) Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal Biochem 166: 368-379
-
(1987)
Anal Biochem
, vol.166
, pp. 368-379
-
-
Schagger, H.1
von Jagow, G.2
-
24
-
-
0027255191
-
The N-end rule in Escherichia coli: Cloning and analysis of the leucyl, phenylalanyl-tRNA-protein transferase gene aat
-
Shrader TE, Tobias JW, Varshavsky A (1993) The N-end rule in Escherichia coli: cloning and analysis of the leucyl, phenylalanyl-tRNA-protein transferase gene aat. J Bacteriol 175: 4364-4374
-
(1993)
J Bacteriol
, vol.175
, pp. 4364-4374
-
-
Shrader, T.E.1
Tobias, J.W.2
Varshavsky, A.3
-
26
-
-
0016367645
-
A mutant of Escherichia coli defective in leucyl, phenylalanyl-tRNA-protein transferase
-
Soffer RL, Savage M (1974) A mutant of Escherichia coli defective in leucyl, phenylalanyl-tRNA-protein transferase. Proc Natl Acad Sci USA 71: 1004-1007
-
(1974)
Proc Natl Acad Sci USA
, vol.71
, pp. 1004-1007
-
-
Soffer, R.L.1
Savage, M.2
-
27
-
-
33845706511
-
Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog
-
Suto K, Shimizu Y,Watanabe K, Ueda T, Fukai S, Nureki O, Tomita K (2006) Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog. EMBO J 25: 5942-5950
-
(2006)
EMBO J
, vol.25
, pp. 5942-5950
-
-
Suto, K.1
Shimizu, Y.2
Watanabe, K.3
Ueda, T.4
Fukai, S.5
Nureki, O.6
Tomita, K.7
-
28
-
-
35548974677
-
The mammalian N-end rule pathway: New insights into its components and physiological roles
-
Tasaki T, Kwon YT (2007) The mammalian N-end rule pathway: new insights into its components and physiological roles. Trends Biochem Sci 32: 520-528
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 520-528
-
-
Tasaki, T.1
Kwon, Y.T.2
-
30
-
-
0029861143
-
The N-end rule: Functions, mysteries, uses
-
Varshavsky A (1996) The N-end rule: functions, mysteries, uses. Proc Natl Acad Sci USA 93: 12142-12149
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12142-12149
-
-
Varshavsky, A.1
-
31
-
-
20444404618
-
Regulated protein degradation
-
Varshavsky A (2005) Regulated protein degradation. Trends Biochem Sci 30: 283-286
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 283-286
-
-
Varshavsky, A.1
-
32
-
-
33847226240
-
ClpS modulates but is not essential for bacterial N-end rule degradation
-
Wang KH, Sauer RT, Baker TA (2007) ClpS modulates but is not essential for bacterial N-end rule degradation. Genes Dev 21: 403-408
-
(2007)
Genes Dev
, vol.21
, pp. 403-408
-
-
Wang, K.H.1
Sauer, R.T.2
Baker, T.A.3
-
33
-
-
35348938968
-
Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
-
Watanabe K, Toh Y, Suto K, Shimizu Y, Oka N, Wada T, Tomita K (2007) Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase. Nature 449: 867-871
-
(2007)
Nature
, vol.449
, pp. 867-871
-
-
Watanabe, K.1
Toh, Y.2
Suto, K.3
Shimizu, Y.4
Oka, N.5
Wada, T.6
Tomita, K.7
-
34
-
-
0033517351
-
Global unfolding of a substrate protein by the Hsp100 chaperone ClpA
-
Weber-Ban EU, Reid BG, Miranker AD, Horwich AL (1999) Global unfolding of a substrate protein by the Hsp100 chaperone ClpA. Nature 401: 90-93
-
(1999)
Nature
, vol.401
, pp. 90-93
-
-
Weber-Ban, E.U.1
Reid, B.G.2
Miranker, A.D.3
Horwich, A.L.4
-
35
-
-
0033520987
-
Posttranslational quality control: Folding, refolding, and degrading proteins
-
Wickner S, Maurizi MR, Gottesman S (1999) Posttranslational quality control: folding, refolding, and degrading proteins. Science 286: 1888-1893
-
(1999)
Science
, vol.286
, pp. 1888-1893
-
-
Wickner, S.1
Maurizi, M.R.2
Gottesman, S.3
-
36
-
-
0036896886
-
Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA
-
Zeth K, Ravelli RB, Paal K, Cusack S, Bukau B, Dougan DA (2002) Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA. Nat Struct Biol 9: 906-911
-
(2002)
Nat Struct Biol
, vol.9
, pp. 906-911
-
-
Zeth, K.1
Ravelli, R.B.2
Paal, K.3
Cusack, S.4
Bukau, B.5
Dougan, D.A.6
|