메뉴 건너뛰기




Volumn 7167, Issue , 2009, Pages

Sample preparation and assay refinements for pathogen detection platforms

Author keywords

Automated concentration system; Biosensor assay refinements; Food; Sample processing; Water

Indexed keywords

APPLE JUICE; AUTOMATED CONCENTRATION SYSTEM; BACILLUS ATROPHAEUS; BATTLEFIELD ENVIRONMENTS; BIOTHREAT AGENTS; BIOWARFARE; CIVILIAN POPULATIONS; COMBAT READINESS; COMPLEX MATRICES; EVANESCENT WAVE; FIBER OPTIC BIOSENSOR; FOOD; GROUND BEEF; HOLLOW FIBER; LOW LEVEL; MICROBIAL PATHOGENS; PATHOGEN DETECTION; PCR ANALYSIS; POTENTIAL PROBLEMS; POTENTIAL THREATS; PROCESSING PROCEDURES; PUBLIC HEALTH; RAPID DETECTION; RAPID PROCESSING; RECREATIONAL WATER; SAMPLE PREPARATION; SAMPLE PROCESSING; SOUTH FLORIDA; TARGET ANALYTES; WARFIGHTER;

EID: 67449093322     PISSN: 16057422     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1117/12.807763     Document Type: Conference Paper
Times cited : (1)

References (33)
  • 1
    • 27144496729 scopus 로고    scopus 로고
    • Current and developing technologies for monitoring agents of bioterrorism and biowarfare
    • Lim, D. V., Simpson, J. M., Keams, E. A., and Kramer, M. F., "Current and developing technologies for monitoring agents of bioterrorism and biowarfare," Clin. Microbiol. Rev. 18 (4), 583-607 (2005).
    • (2005) Clin. Microbiol. Rev , vol.18 , Issue.4 , pp. 583-607
    • Lim, D.V.1    Simpson, J.M.2    Keams, E.A.3    Kramer, M.F.4
  • 2
    • 0030747103 scopus 로고    scopus 로고
    • Preparation of PCR samples from food by a rapid and simple centrifugation technique evaluated by detection of Escherichia coli O157:H7
    • Lindqvist, R., "Preparation of PCR samples from food by a rapid and simple centrifugation technique evaluated by detection of Escherichia coli O157:H7," Intl. J. Food Microbiol. 37, 73-82 (1997).
    • (1997) Intl. J. Food Microbiol , vol.37 , pp. 73-82
    • Lindqvist, R.1
  • 3
    • 0030937181 scopus 로고    scopus 로고
    • A rapid sample preparation method for PCR detection of food pathogens based on buoyant density centrifugation
    • Lindqvist, R., Norling, B. and Lambertz, S., "A rapid sample preparation method for PCR detection of food pathogens based on buoyant density centrifugation," Lett. Appl. Microbiol. 24 (4), 306-310 (1997).
    • (1997) Lett. Appl. Microbiol , vol.24 , Issue.4 , pp. 306-310
    • Lindqvist, R.1    Norling, B.2    Lambertz, S.3
  • 4
    • 1542513866 scopus 로고    scopus 로고
    • Rapid quantification of Yersinia enterocolitica in pork samples by a novel sample preparation method, flotation, prior to real-time PCR
    • Wolffs, P., Knutsson, R., Norling, B. and Radstrom, P., "Rapid quantification of Yersinia enterocolitica in pork samples by a novel sample preparation method, flotation, prior to real-time PCR," J. Clin. Microbiol. 42, 1042-1047 (2004).
    • (2004) J. Clin. Microbiol , vol.42 , pp. 1042-1047
    • Wolffs, P.1    Knutsson, R.2    Norling, B.3    Radstrom, P.4
  • 5
    • 0032014582 scopus 로고    scopus 로고
    • Direct 24-hour presumptive enumeration of Escherichia coli O157:H7 in foods using hydrophobic grid memebrane filter followed by serological confirmation: Collaborative study
    • Entis, P., "Direct 24-hour presumptive enumeration of Escherichia coli O157:H7 in foods using hydrophobic grid memebrane filter followed by serological confirmation: collaborative study," J AOAC Int. 81 (2), 403-418 (1998).
    • (1998) J AOAC Int , vol.81 , Issue.2 , pp. 403-418
    • Entis, P.1
  • 6
    • 2442475329 scopus 로고    scopus 로고
    • Detection of Bacillus spores using PCR and FTA filters
    • Lampel, K., Dyer, D., Kornegay, L. and Orlandi, P., "Detection of Bacillus spores using PCR and FTA filters," J. Food Prot. 67 (5), 1036-1038 (2004).
    • (2004) J. Food Prot , vol.67 , Issue.5 , pp. 1036-1038
    • Lampel, K.1    Dyer, D.2    Kornegay, L.3    Orlandi, P.4
  • 7
    • 0011084966 scopus 로고
    • Methods for the separation and concentration of bacteria from foods
    • Payne, M. J. and Kroll, R.G., "Methods for the separation and concentration of bacteria from foods," Trends Food Sci. Technol. 2, 315-319 (1991).
    • (1991) Trends Food Sci. Technol , vol.2 , pp. 315-319
    • Payne, M.J.1    Kroll, R.G.2
  • 8
    • 0035543221 scopus 로고    scopus 로고
    • Combination of immunomagnetic separation and polymerase chain reaction for the simultaneous detection of Listeria monocytogenes and Salmonella spp. in food samples
    • Hsih, H.Y. and Tsen, H.Y., "Combination of immunomagnetic separation and polymerase chain reaction for the simultaneous detection of Listeria monocytogenes and Salmonella spp. in food samples," J. Food Prot. 64 (11), 1744-1750 (2001).
    • (2001) J. Food Prot , vol.64 , Issue.11 , pp. 1744-1750
    • Hsih, H.Y.1    Tsen, H.Y.2
  • 9
    • 0030041106 scopus 로고    scopus 로고
    • Isolation of enterohemorrhagic Escherichia coli 0157 strains from patients with hemolytic-uremic syndrome by using immunomagnetic separation, DNA-based methods, and direct culture
    • Karch, H., Janetzki-Mittmann, C., Aleksic, S. and Datz, M., "Isolation of enterohemorrhagic Escherichia coli 0157 strains from patients with hemolytic-uremic syndrome by using immunomagnetic separation, DNA-based methods, and direct culture," J. Clin. Microbiol. 34, 516-519 (1996).
    • (1996) J. Clin. Microbiol , vol.34 , pp. 516-519
    • Karch, H.1    Janetzki-Mittmann, C.2    Aleksic, S.3    Datz, M.4
  • 10
    • 0033547721 scopus 로고    scopus 로고
    • Rapid detection of stressed Salmonella spp. in dairy and egg products using immunomagnetic separation and PCR
    • Rijpens, N., Herman, L., Vereecken, F., Jannes, G., De Smedt, J. and De Zutter, L., "Rapid detection of stressed Salmonella spp. in dairy and egg products using immunomagnetic separation and PCR," Intl. J. Food Microbiol. 46 (1), 37-44 (1999).
    • (1999) Intl. J. Food Microbiol , vol.46 , Issue.1 , pp. 37-44
    • Rijpens, N.1    Herman, L.2    Vereecken, F.3    Jannes, G.4    De Smedt, J.5    De Zutter, L.6
  • 11
    • 0034435001 scopus 로고    scopus 로고
    • PCR identification of Salmonella cells in food and stool samples after immunomagnetic separation
    • Spanova, A., Rittich, B., Karpiskova, R., Cechova, L. and Skapova, D., "PCR identification of Salmonella cells in food and stool samples after immunomagnetic separation," Bioseparation 9 (6), 379-384 (2000).
    • (2000) Bioseparation , vol.9 , Issue.6 , pp. 379-384
    • Spanova, A.1    Rittich, B.2    Karpiskova, R.3    Cechova, L.4    Skapova, D.5
  • 12
    • 1442264097 scopus 로고    scopus 로고
    • A buyer's guide to DNA and RNA prep kits
    • Chua, J., "A buyer's guide to DNA and RNA prep kits," The Scientist 18, 38-39 (2004).
    • (2004) The Scientist , vol.18 , pp. 38-39
    • Chua, J.1
  • 13
    • 2342535118 scopus 로고    scopus 로고
    • Assessment of automated DNA extraction coupled with real-time PCR for measuring Epstein-Barr virus load in whole blood, peripheral mononuclear cells and plasma
    • Fafi-Kremer, S., Brengel-Pesce, K., Bargues, G., Bourgeat, M.J., Genoulaz, O., Seigneurin, J.M. and Morand, P., "Assessment of automated DNA extraction coupled with real-time PCR for measuring Epstein-Barr virus load in whole blood, peripheral mononuclear cells and plasma," J. Clin. Virol. 30 (2), 157-164 (2004).
    • (2004) J. Clin. Virol , vol.30 , Issue.2 , pp. 157-164
    • Fafi-Kremer, S.1    Brengel-Pesce, K.2    Bargues, G.3    Bourgeat, M.J.4    Genoulaz, O.5    Seigneurin, J.M.6    Morand, P.7
  • 14
    • 10444276436 scopus 로고    scopus 로고
    • Fast detection of Noroviruses using a real-time PCR assay and automated sample preparation
    • Schmid, M., Oehme, R., Schalasta, G., Brockmann, S., Kimmig, P. and Enders, G., "Fast detection of Noroviruses using a real-time PCR assay and automated sample preparation," BMC Infect. Dis. 4, 15 (2004).
    • (2004) BMC Infect. Dis , vol.4 , pp. 15
    • Schmid, M.1    Oehme, R.2    Schalasta, G.3    Brockmann, S.4    Kimmig, P.5    Enders, G.6
  • 16
    • 3042856485 scopus 로고    scopus 로고
    • Insulator-based dielectrophoresis for the selective concentration and separation of live bacteria in water
    • Lapizco-Encinas, B., Simmons, B., Cummings, E. and Fintschenko, Y., "Insulator-based dielectrophoresis for the selective concentration and separation of live bacteria in water." Electrophoresis 25, 1695-1704 (2004).
    • (2004) Electrophoresis , vol.25 , pp. 1695-1704
    • Lapizco-Encinas, B.1    Simmons, B.2    Cummings, E.3    Fintschenko, Y.4
  • 17
    • 0036010263 scopus 로고    scopus 로고
    • Detection of Escherichia coli O157:H7 in 10- and 25-gram ground beef samples with an evanescent-wave biosensor with silica and polystyrene waveguides
    • DeMarco, D. R. and Lim, D. V., "Detection of Escherichia coli O157:H7 in 10- and 25-gram ground beef samples with an evanescent-wave biosensor with silica and polystyrene waveguides," J. Food Prot. 65(4), 596-602 (2002).
    • (2002) J. Food Prot , vol.65 , Issue.4 , pp. 596-602
    • DeMarco, D.R.1    Lim, D.V.2
  • 18
    • 0033166564 scopus 로고    scopus 로고
    • Rapid detection of Escherichia coli O157:H7 in ground beef using a fiber-optic biosensor
    • DeMarco, D. R., Saaski, E. W., McCrae, D. A. and Lim, D. V., "Rapid detection of Escherichia coli O157:H7 in ground beef using a fiber-optic biosensor," J. Food Prot. 62 (7), 711-716 (1999).
    • (1999) J. Food Prot , vol.62 , Issue.7 , pp. 711-716
    • DeMarco, D.R.1    Saaski, E.W.2    McCrae, D.A.3    Lim, D.V.4
  • 19
    • 0027295283 scopus 로고
    • A fiber optic biosensor: Combination tapered fibers designed for improved signal acquisition
    • Anderson, G.P., Golden, J.P. and Ligler, F.S., "A fiber optic biosensor: Combination tapered fibers designed for improved signal acquisition," Biosens. Bioelectron, 8 (5), 249-256 (1993).
    • (1993) Biosens. Bioelectron , vol.8 , Issue.5 , pp. 249-256
    • Anderson, G.P.1    Golden, J.P.2    Ligler, F.S.3
  • 20
    • 0026803262 scopus 로고
    • Detection of Clostridium botulinum toxin A using a fiber optic-based biosensor
    • Olgert, R.A., Brown, J.E., Singh, B.R., Shriver-Lake, L.C. and Ligler, F.S., "Detection of Clostridium botulinum toxin A using a fiber optic-based biosensor," Anal. Biochem., 205 (2), 306-312 (1992).
    • (1992) Anal. Biochem , vol.205 , Issue.2 , pp. 306-312
    • Olgert, R.A.1    Brown, J.E.2    Singh, B.R.3    Shriver-Lake, L.C.4    Ligler, F.S.5
  • 21
    • 0001739487 scopus 로고    scopus 로고
    • Portable multichannel fiber optic biosensor for field detection
    • Golden, J.P., Saaski, E.W., Shriver-Lake, L.C., Anderson, G.P. and Ligler, F.S., "Portable multichannel fiber optic biosensor for field detection," Opt. Eng. 36 (4), 1008-1013 (1997).
    • (1997) Opt. Eng , vol.36 , Issue.4 , pp. 1008-1013
    • Golden, J.P.1    Saaski, E.W.2    Shriver-Lake, L.C.3    Anderson, G.P.4    Ligler, F.S.5
  • 22
    • 0028796386 scopus 로고
    • Detection of Yersinia pestis fraction 1 antigen with a fiber optic biosensor
    • Cao, K., Anderson, G.P., Ligler, F.S. and Ezzel, J., "Detection of Yersinia pestis fraction 1 antigen with a fiber optic biosensor," J. Clin. Microbiol. 33 (2), 336-341 (1995).
    • (1995) J. Clin. Microbiol , vol.33 , Issue.2 , pp. 336-341
    • Cao, K.1    Anderson, G.P.2    Ligler, F.S.3    Ezzel, J.4
  • 23
    • 0347917927 scopus 로고    scopus 로고
    • Direct detection of Escherichia coli O157:H7 in unpasteurized apple juice with an evanescent wave biosensor
    • DeMarco, D. R. and Lim, D.V., "Direct detection of Escherichia coli O157:H7 in unpasteurized apple juice with an evanescent wave biosensor," J. Rapid Meth. Automat. Microbiol. 9, 241-257 (2001).
    • (2001) J. Rapid Meth. Automat. Microbiol , vol.9 , pp. 241-257
    • DeMarco, D.R.1    Lim, D.V.2
  • 24
    • 0346965844 scopus 로고    scopus 로고
    • A rapid and automated fiber optic-based biosensor assay for the detection of Salmonella in spent irrigation water used in the sprouting of sprout seeds
    • Kramer, M. F. and Lim, D. V., "A rapid and automated fiber optic-based biosensor assay for the detection of Salmonella in spent irrigation water used in the sprouting of sprout seeds," J. Food Prot. 67 (1), 46-52 (2004).
    • (2004) J. Food Prot , vol.67 , Issue.1 , pp. 46-52
    • Kramer, M.F.1    Lim, D.V.2
  • 25
    • 0036671564 scopus 로고    scopus 로고
    • Recovery of Escherichia coli O157:H7 from optical waveguides used for rapid biosensor detection
    • Kramer, M.F., Tims, T.B. and Lim, D.V., "Recovery of Escherichia coli O157:H7 from optical waveguides used for rapid biosensor detection," J. Rapid Meth. Automat. Microbiol. 10 (2), 93-106 (2002).
    • (2002) J. Rapid Meth. Automat. Microbiol , vol.10 , Issue.2 , pp. 93-106
    • Kramer, M.F.1    Tims, T.B.2    Lim, D.V.3
  • 26
    • 0142060222 scopus 로고    scopus 로고
    • Confirmation of viable E. coli O157:H7 by enrichment and PCR after rapid biosensor detection
    • Tims, T.B. and Lim, D.V., "Confirmation of viable E. coli O157:H7 by enrichment and PCR after rapid biosensor detection," J. Microbiol. Meth. 55 (1), 141-147 (2003).
    • (2003) J. Microbiol. Meth , vol.55 , Issue.1 , pp. 141-147
    • Tims, T.B.1    Lim, D.V.2
  • 27
    • 27444435133 scopus 로고    scopus 로고
    • Rapid PCR confirmation of E. coli O157:H7 after evanescent wave fiber optic biosensor detection
    • Simpson, J.M. and Lim, D.V., "Rapid PCR confirmation of E. coli O157:H7 after evanescent wave fiber optic biosensor detection," Biosens. Bioelectron. 21, 881-887 (2005).
    • (2005) Biosens. Bioelectron , vol.21 , pp. 881-887
    • Simpson, J.M.1    Lim, D.V.2
  • 28
    • 0036233691 scopus 로고    scopus 로고
    • Concentration of Cryptosporidium, microsporidia and other water-borne pathogens by continuous separation channel centrifugation
    • Borchardt, M.A. and Spencer, S.K., "Concentration of Cryptosporidium, microsporidia and other water-borne pathogens by continuous separation channel centrifugation," J. Appl. Microbiol. 92 (4), 649-656 (2002).
    • (2002) J. Appl. Microbiol , vol.92 , Issue.4 , pp. 649-656
    • Borchardt, M.A.1    Spencer, S.K.2
  • 29
    • 32044456940 scopus 로고    scopus 로고
    • Development of a rapid method for simultaneous recovery of diverse microbes in drinking water by ultrafiltration with sodium polyphosphate and surfactants
    • Hill, V.R., Polaczyk, A.L., Hahn, D., Narayanan, J., Cromeans, T.L., Roberts, J.M. and Amburgey, J. E., "Development of a rapid method for simultaneous recovery of diverse microbes in drinking water by ultrafiltration with sodium polyphosphate and surfactants," Appl. Environ. Microbiol. 71 (11), 6878-6884 (2005).
    • (2005) Appl. Environ. Microbiol , vol.71 , Issue.11 , pp. 6878-6884
    • Hill, V.R.1    Polaczyk, A.L.2    Hahn, D.3    Narayanan, J.4    Cromeans, T.L.5    Roberts, J.M.6    Amburgey, J.E.7
  • 30
    • 23844517060 scopus 로고    scopus 로고
    • Comparison of 2 ultrafiltration systems for the concentration of seeded viruses from environmental waters
    • Olszewski, J., Winona, L. and Oshima, K.H., "Comparison of 2 ultrafiltration systems for the concentration of seeded viruses from environmental waters," Can. J. Microbiol. 51 (4), 295-303 (2005).
    • (2005) Can. J. Microbiol , vol.51 , Issue.4 , pp. 295-303
    • Olszewski, J.1    Winona, L.2    Oshima, K.H.3
  • 31
    • 33646560920 scopus 로고    scopus 로고
    • Portable continuous flow centrifugation and method 1623 for monitoring of waterborne protozoa from large volumes of various water matrices
    • Zuckerman, U. and Tzipori, S., "Portable continuous flow centrifugation and method 1623 for monitoring of waterborne protozoa from large volumes of various water matrices," J. Appl. Microbiol. 100 (6), 1220-1227 (2006)
    • (2006) J. Appl. Microbiol , vol.100 , Issue.6 , pp. 1220-1227
    • Zuckerman, U.1    Tzipori, S.2
  • 32
    • 47249159416 scopus 로고    scopus 로고
    • Automated concentration and recovery of microorganisms from drinking water using dead-end ultrafiltration
    • Kearns, E.A., Magaña, S. and Lim, D.V., "Automated concentration and recovery of microorganisms from drinking water using dead-end ultrafiltration," J. Appl. Microbiol. 105 (2), 432-442 (2008).
    • (2008) J. Appl. Microbiol , vol.105 , Issue.2 , pp. 432-442
    • Kearns, E.A.1    Magaña, S.2    Lim, D.V.3
  • 33
    • 49449104355 scopus 로고    scopus 로고
    • Rapid ultrafiltration concentration and biosensor detection of enterococci from large volumes of Florida recreational water
    • Leskinen, S. and Lim, D.V., "Rapid ultrafiltration concentration and biosensor detection of enterococci from large volumes of Florida recreational water," Appl. Environ. Microbiol. 74 (15), 4792-4798 (2008).
    • (2008) Appl. Environ. Microbiol , vol.74 , Issue.15 , pp. 4792-4798
    • Leskinen, S.1    Lim, D.V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.