메뉴 건너뛰기




Volumn 57, Issue 4, 2009, Pages 701-717

Importance of different physiological groups of iron reducing microorganisms in an acidic mining lake remediation experiment

Author keywords

[No Author keywords available]

Indexed keywords

ACID; BACTERIAL DNA; FERRIC ION; FRESH WATER; IRON; RNA 16S;

EID: 65049090641     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-009-9505-0     Document Type: Article
Times cited : (28)

References (66)
  • 2
    • 0002473895 scopus 로고
    • Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in subsurface aquifer sediments
    • DL Balkwill FR Leach JT Wilson JF McNabb DC White 1988 Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in subsurface aquifer sediments Microb Ecol 16 73 84
    • (1988) Microb Ecol , vol.16 , pp. 73-84
    • Balkwill, D.L.1    Leach, F.R.2    Wilson, J.T.3    White, D.C.4
  • 4
    • 0026080749 scopus 로고
    • Acidiphilium symbioticum sp.nov., an acidophilic heterotrophic bacterium from Thiobacillus ferrooxidans cultures isolated from Indian mines
    • S Bhattacharyya BK Chakrabarty A Das PN Kundu PC Banerjee 1991 Acidiphilium symbioticum sp.nov., an acidophilic heterotrophic bacterium from Thiobacillus ferrooxidans cultures isolated from Indian mines Can J Microbiol 37 78 85
    • (1991) Can J Microbiol , vol.37 , pp. 78-85
    • Bhattacharyya, S.1    Chakrabarty, B.K.2    Das, A.3    Kundu, P.N.4    Banerjee, P.C.5
  • 6
    • 0003131733 scopus 로고    scopus 로고
    • Phylogenetic and biochemical diversity among acidophilic bacteria that respire on iron
    • ASM Press Washington, DC
    • Blake RII, Johnson DB (2000) Phylogenetic and biochemical diversity among acidophilic bacteria that respire on iron. In: Lovley DR (ed) Environmental microbe-metal interactions. ASM Press, Washington, DC, pp 53-78
    • (2000) Environmental Microbe-metal Interactions , pp. 53-78
    • Blake Ii, R.1    Johnson, D.B.2    Lovley, D.R.3
  • 8
    • 0031800168 scopus 로고    scopus 로고
    • Reduction of soluble iron and reductive dissolution of ferric iron-containing minerals by moderately thermophilic iron-oxidizing bacteria
    • TAM Bridge DB Johnson 1998 Reduction of soluble iron and reductive dissolution of ferric iron-containing minerals by moderately thermophilic iron-oxidizing bacteria Appl Environ Microbiol 64 2181 2186
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2181-2186
    • Bridge, T.A.M.1    Johnson, D.B.2
  • 9
    • 0017013182 scopus 로고
    • Ferric iron reduction by sulfur- and iron-oxidizing bacteria
    • TD Brock J Gustafson 1976 Ferric iron reduction by sulfur- and iron-oxidizing bacteria Appl Environ Microbiol 32 567 571
    • (1976) Appl Environ Microbiol , vol.32 , pp. 567-571
    • Brock, T.D.1    Gustafson, J.2
  • 11
    • 76549256965 scopus 로고
    • Estimation of bacterial densities by means of the "most probable number"
    • WG Cochran 1950 Estimation of bacterial densities by means of the "most probable number" Biometrics 6 105 116
    • (1950) Biometrics , vol.6 , pp. 105-116
    • Cochran, W.G.1
  • 13
    • 13444304367 scopus 로고    scopus 로고
    • The Ribosomal Database Project (RDP-II): Sequences and tools for high-throughput rRNA analysis
    • Database Issue
    • JR Cole B Chai RJ Farris Q Wang SA Kulam DM McGarrell GM Garrity JM Tiedje 2005 The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis Nucleic Acids Res 1 33 D294 D296 Database Issue
    • (2005) Nucleic Acids Res , vol.1 , Issue.33
    • Cole, J.R.1    Chai, B.2    Farris, R.J.3    Wang, Q.4    Kulam, S.A.5    Garrity, G.M.6    Tiedje, J.M.7
  • 14
    • 0033001801 scopus 로고    scopus 로고
    • Ferribacterium limneticum, gen. nov., sp. nov., an Fe(III)-reducing microorganism isolated from mining-impacted freshwater lake sediments
    • DE Cummings F Caccavo Jr S Spring RF Rosenzweig 1999 Ferribacterium limneticum, gen. nov., sp. nov., an Fe(III)-reducing microorganism isolated from mining-impacted freshwater lake sediments Arch Microbiol 171 183 188
    • (1999) Arch Microbiol , vol.171 , pp. 183-188
    • Cummings, D.E.1    Caccavo Jr, F.2    Spring, S.3    Rosenzweig, R.F.4
  • 18
    • 3042783435 scopus 로고    scopus 로고
    • Phylogenetic analysis of different isolates of Sulfobacillus spp. isolated from uranium-rich environments and recovery of genes using integron-specific primers
    • M Ghauri A Khalid S Grant S Heaphy W Grant 2003 Phylogenetic analysis of different isolates of Sulfobacillus spp. isolated from uranium-rich environments and recovery of genes using integron-specific primers Extremophiles 7 341 345
    • (2003) Extremophiles , vol.7 , pp. 341-345
    • Ghauri, M.1    Khalid, A.2    Grant, S.3    Heaphy, S.4    Grant, W.5
  • 22
    • 0141938368 scopus 로고    scopus 로고
    • Novel acidophiles isolated from moderately acidic mine drainage waters
    • KB Hallberg DB Johnson 2003 Novel acidophiles isolated from moderately acidic mine drainage waters Hydrometallurgy 71 139 148
    • (2003) Hydrometallurgy , vol.71 , pp. 139-148
    • Hallberg, K.B.1    Johnson, D.B.2
  • 23
    • 33644950982 scopus 로고    scopus 로고
    • Macroscopic streamer growths in acidic, metal-rich mine waters in North Wales consist of novel and remarkably simple bacterial communities
    • KB Hallberg K Coupland S Kimura DB Johnson 2006 Macroscopic streamer growths in acidic, metal-rich mine waters in North Wales consist of novel and remarkably simple bacterial communities Appl Environ Microbiol 72 2022 2030
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2022-2030
    • Hallberg, K.B.1    Coupland, K.2    Kimura, S.3    Johnson, D.B.4
  • 24
    • 0001590422 scopus 로고
    • Acidiphilium cryptum gen. nov., sp. nov., heterotrophic bacterium from acidic mineral environments
    • APJ Harrison 1981 Acidiphilium cryptum gen. nov., sp. nov., heterotrophic bacterium from acidic mineral environments Int J Syst Bacteriol 31 327 332
    • (1981) Int J Syst Bacteriol , vol.31 , pp. 327-332
    • Harrison, A.P.J.1
  • 27
    • 0031756689 scopus 로고    scopus 로고
    • Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: Its transfer to the genus Acidiphilium acidiphilium comb. nov
    • A Hiraishi KVP Nagashima K Matsuura K Shimada S Takaichi N Wakao Y Katayama 1998 Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: its transfer to the genus Acidiphilium acidiphilium comb. nov Int J Syst Bacteriol 48 1389 1398
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 1389-1398
    • Hiraishi, A.1    Nagashima, K.V.P.2    Matsuura, K.3    Shimada, K.4    Takaichi, S.5    Wakao, N.6    Katayama, Y.7
  • 28
    • 0025919005 scopus 로고
    • Ferric iron reduction by acidophilic heterotrophic bacteria
    • DB Johnson S McGinness 1991 Ferric iron reduction by acidophilic heterotrophic bacteria Appl Environ Microbiol 57 207 211
    • (1991) Appl Environ Microbiol , vol.57 , pp. 207-211
    • Johnson, D.B.1
  • 29
    • 0038443200 scopus 로고    scopus 로고
    • Novel thermo-acidophilic bacteria isolated from geothermal sites in Yellowstone National Park: Physiological and phylogenetic characteristics
    • DB Johnson N Okibe FF Roberto 2003 Novel thermo-acidophilic bacteria isolated from geothermal sites in Yellowstone National Park: physiological and phylogenetic characteristics Arch Microbiol 180 60 68
    • (2003) Arch Microbiol , vol.180 , pp. 60-68
    • Johnson, D.B.1    Okibe, N.2    Roberto, F.F.3
  • 30
    • 0027260811 scopus 로고
    • A computer program for the determination of most probable number and its confidence limits
    • JA Klee 1993 A computer program for the determination of most probable number and its confidence limits J Microbiol Methods 18 91 98
    • (1993) J Microbiol Methods , vol.18 , pp. 91-98
    • Klee, J.A.1
  • 31
  • 32
    • 0344603826 scopus 로고    scopus 로고
    • Microbial reduction of Fe(III) in acidic sediments: Isolation of Acidiphilium cryptum JF-5 capable of coupling the reduction of Fe(III) to the oxidation of glucose
    • K Küsel T Dorsch G Acker E Stackebrandt 1999 Microbial reduction of Fe(III) in acidic sediments: isolation of Acidiphilium cryptum JF-5 capable of coupling the reduction of Fe(III) to the oxidation of glucose Appl Environ Microbiol 65 3633 3640
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3633-3640
    • Küsel, K.1    Dorsch, T.2    Acker, G.3    Stackebrandt, E.4
  • 33
    • 0033645421 scopus 로고    scopus 로고
    • 2 in coal mining-impacted freshwater lake sediments
    • 2 in coal mining-impacted freshwater lake sediments Microb Ecol 40 238 249
    • (2000) Microb Ecol , vol.40 , pp. 238-249
    • Küsel, K.1    Dorsch, T.2
  • 35
    • 26844550212 scopus 로고    scopus 로고
    • Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill
    • B Lin M Braster BM van Breukelen HW van Verseveld HV Westerhoff WFM Röling 2005 Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill Appl Environ Microbiol 71 5983 5991
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5983-5991
    • Lin, B.1    Braster, M.2    Van Breukelen, B.M.3    Van Verseveld, H.W.4    Westerhoff, H.V.5    Röling, W.F.M.6
  • 37
    • 0000816705 scopus 로고
    • Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal Potomac river
    • DR Lovley EJP Phillips 1986 Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal Potomac river Appl Environ Microbiol 52 751 757
    • (1986) Appl Environ Microbiol , vol.52 , pp. 751-757
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 38
    • 0000209741 scopus 로고
    • Organic matter mineralization with reduction of ferric iron in anaerobic sediments
    • DR Lovley EJP Phillips 1986 Organic matter mineralization with reduction of ferric iron in anaerobic sediments Appl Environ Microbiol 51 683 689
    • (1986) Appl Environ Microbiol , vol.51 , pp. 683-689
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 39
    • 0000816704 scopus 로고
    • Rapid assay for microbially reducible ferric iron in aquatic sediments
    • DR Lovley EJP Phillips 1987 Rapid assay for microbially reducible ferric iron in aquatic sediments Appl Environ Microbiol 53 1536 1540
    • (1987) Appl Environ Microbiol , vol.53 , pp. 1536-1540
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 40
    • 0025890073 scopus 로고
    • Dissimilatory Fe(III) and Mn(IV) reduction
    • DR Lovley 1991 Dissimilatory Fe(III) and Mn(IV) reduction Microbiol Rev 55 259 287
    • (1991) Microbiol Rev , vol.55 , pp. 259-287
    • Lovley, D.R.1
  • 43
    • 0037640029 scopus 로고    scopus 로고
    • Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov
    • MLGC Luijten J de Weert H Smidt HTS Boschker WM de Vos G Schraa AJM Stams 2003 Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov Int J Syst Evol Microbiol 53 787 793
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 787-793
    • Mlgc, L.1    De Weert, J.2    Smidt, H.3    Boschker, H.T.S.4    De Vos, W.M.5    Schraa, G.6    Stams, A.J.M.7
  • 44
    • 0043076345 scopus 로고    scopus 로고
    • The role of enhanced heterotrophic bacterial growth on iron oxidation by Acidithiobacillus ferrooxidans
    • EA Marchand J Silverstein 2003 The role of enhanced heterotrophic bacterial growth on iron oxidation by Acidithiobacillus ferrooxidans Geomicrobiol J 20 231 244
    • (2003) Geomicrobiol J , vol.20 , pp. 231-244
    • Marchand, E.A.1    Silverstein, J.2
  • 45
    • 1542290492 scopus 로고    scopus 로고
    • Microbial cycling of iron and sulfur in sediments of acidic and pH-neutral mining lakes in Lusatia (Brandenburg, Germany)
    • J Meier HD Babenzien K Wendt-Potthoff 2004 Microbial cycling of iron and sulfur in sediments of acidic and pH-neutral mining lakes in Lusatia (Brandenburg, Germany) Biogeochemistry 67 135 156
    • (2004) Biogeochemistry , vol.67 , pp. 135-156
    • Meier, J.1    Babenzien, H.D.2    Wendt-Potthoff, K.3
  • 46
    • 33644826898 scopus 로고    scopus 로고
    • Temperature dependence of Fe(III) and sulfate reduction rates and its effect on growth and composition of bacterial enrichments from an acidic pit lake neutralization experiment
    • J Meier R Costa K Smalla B Boehrer K Wendt-Potthoff 2005 Temperature dependence of Fe(III) and sulfate reduction rates and its effect on growth and composition of bacterial enrichments from an acidic pit lake neutralization experiment Geobiology 3 261 274
    • (2005) Geobiology , vol.3 , pp. 261-274
    • Meier, J.1    Costa, R.2    Smalla, K.3    Boehrer, B.4    Wendt-Potthoff, K.5
  • 47
    • 65049084544 scopus 로고    scopus 로고
    • Remediation from a microbial point of view: The pilot scale neutralization experiment in acidic pit lake 111 (Lusatia, Germany)
    • Ottawa, Ontario
    • Meier J, Kleinsteuber S, Bozau E, Koschorreck M, Geller W, Wendt-Potthoff K (2006) Remediation from a microbial point of view: The pilot scale neutralization experiment in acidic pit lake 111 (Lusatia, Germany). CLRA/ACRSD 2006 Conference, Ottawa, Ontario: 259-272
    • (2006) CLRA/ACRSD 2006 Conference , pp. 259-272
    • Meier, J.1    Kleinsteuber, S.2    Bozau, E.3    Koschorreck, M.4    Geller, W.5    Wendt-Potthoff, K.6
  • 48
    • 0028132223 scopus 로고
    • Iron and manganese in anaerobic respiration: Environmental significance, physiology, and regulation
    • KH Nealson D Saffarini 1994 Iron and manganese in anaerobic respiration: environmental significance, physiology, and regulation Annu Rev Microbiol 48 311 343
    • (1994) Annu Rev Microbiol , vol.48 , pp. 311-343
    • Nealson, K.H.1    Saffarini, D.2
  • 49
    • 85102096424 scopus 로고
    • Aqueous pyrite oxidation and the consequent formation of secondary iron minerals
    • Soil Science Society of America Madison, WI
    • Nordstrom DK (1982) Aqueous pyrite oxidation and the consequent formation of secondary iron minerals. In: Kittrick JA, Fanning DS, Hossner LR (eds) Acid sulfate weathering. Soil Science Society of America, Madison, WI, pp 37-56
    • (1982) Acid Sulfate Weathering , pp. 37-56
    • Nordstrom, D.K.1    Kittrick, J.A.2    Fanning, D.S.3    Hossner, L.R.4
  • 50
    • 2142853093 scopus 로고    scopus 로고
    • Enumeration and characterization of iron(III)-reducing microbial communities from acidic subsurface sediments contaminated with uranium(VI)
    • L Petrie NN North SL Dollhopf DL Balkwill JE Kostka 2003 Enumeration and characterization of iron(III)-reducing microbial communities from acidic subsurface sediments contaminated with uranium(VI) Appl Environ Microbiol 69 7467 7479
    • (2003) Appl Environ Microbiol , vol.69 , pp. 7467-7479
    • Petrie, L.1    North, N.N.2    Dollhopf, S.L.3    Balkwill, D.L.4    Kostka, J.E.5
  • 51
    • 0027100601 scopus 로고
    • Oxidation and reduction of iron by acidophilic bacteria
    • JT Pronk DB Johnson 1992 Oxidation and reduction of iron by acidophilic bacteria Geomicrobiol J 10 153 171
    • (1992) Geomicrobiol J , vol.10 , pp. 153-171
    • Pronk, J.T.1    Johnson, D.B.2
  • 53
    • 0019390139 scopus 로고
    • Sedimentary iron monosulfides: Kinetics and mechanism of formation
    • AJ Pyzik SE Sommer 1981 Sedimentary iron monosulfides: kinetics and mechanism of formation Geochim Cosmochim Acta 45 687 698
    • (1981) Geochim Cosmochim Acta , vol.45 , pp. 687-698
    • Pyzik, A.J.1    Sommer, S.E.2
  • 54
    • 0036252166 scopus 로고    scopus 로고
    • Influence of biogenic Fe(II) on bacterial crystalline Fe(III) oxide reduction
    • EE Roden MM Urrutia 2002 Influence of biogenic Fe(II) on bacterial crystalline Fe(III) oxide reduction Geomicrobiol J 19 209 251
    • (2002) Geomicrobiol J , vol.19 , pp. 209-251
    • Roden, E.E.1    Urrutia, M.M.2
  • 55
    • 0001169292 scopus 로고
    • Fermentation of tartrate enantiomers by anaerobic bacteria, and description of two new species of strict anaerobes, Ruminococcus pasteurii and Ilyobacter tartaricus
    • B Schink 1984 Fermentation of tartrate enantiomers by anaerobic bacteria, and description of two new species of strict anaerobes, Ruminococcus pasteurii and Ilyobacter tartaricus Arch Microbiol 139 409 414
    • (1984) Arch Microbiol , vol.139 , pp. 409-414
    • Schink, B.1
  • 56
    • 0344833251 scopus 로고
    • Reaktion von Eisen(III)-Oxihydraten während der Frühdiagenese in marinen Sedimenten: Experimentelle Untersuchungen
    • U Schinzel A Dahmke HD Schulz 1993 Reaktion von Eisen(III)-Oxihydraten während der Frühdiagenese in marinen Sedimenten: experimentelle Untersuchungen Z Dtsch Geol Ges 144 224 247
    • (1993) Z Dtsch Geol Ges , vol.144 , pp. 224-247
    • Schinzel, U.1    Dahmke, A.2    Schulz, H.D.3
  • 60
    • 0001967434 scopus 로고
    • Volatile fatty acids and hydrogen as substrates for sulfate-reducing bacteria in anaerobic marine sediments
    • J Sørensen D Christensen BB Jørgensen 1981 Volatile fatty acids and hydrogen as substrates for sulfate-reducing bacteria in anaerobic marine sediments Appl Environ Microbiol 42 5 11
    • (1981) Appl Environ Microbiol , vol.42 , pp. 5-11
    • Sørensen, J.1    Christensen, D.2    Jørgensen, B.B.3
  • 61
    • 33847670407 scopus 로고
    • Ferrozine-a new spectrophotometric reagent for iron
    • LL Stookey 1970 Ferrozine-a new spectrophotometric reagent for iron Anal Chem 42 79 781
    • (1970) Anal Chem , vol.42 , pp. 79-781
    • Stookey, L.L.1
  • 62
    • 0034813332 scopus 로고    scopus 로고
    • Geobacter bremensis sp. nov. and Geobacter pelophilus sp. nov., two dissimilatory ferric-iron-reducing bacteria
    • KL Straub BEE Buchholz-Cleven 2001 Geobacter bremensis sp. nov. and Geobacter pelophilus sp. nov., two dissimilatory ferric-iron-reducing bacteria Int J Syst Evol Microbiol 51 1805 1808
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1805-1808
    • Straub, K.L.1    Buchholz-Cleven, B.E.E.2
  • 63
    • 0027643251 scopus 로고
    • Alkalinity generation by Fe(III) reduction versus sulfate reduction in wetlands constructed for acid mine drainage treatment
    • MA Vile RK Wieder 1993 Alkalinity generation by Fe(III) reduction versus sulfate reduction in wetlands constructed for acid mine drainage treatment Water Air Soil Pollut 69 425 441
    • (1993) Water Air Soil Pollut , vol.69 , pp. 425-441
    • Vile, M.A.1    Wieder, R.K.2
  • 64
    • 0027333164 scopus 로고
    • New procedure for determining reactive Fe(III) and Fe(II) minerals in sediments
    • K Wallmann K Hennies I König W Petersen HD Knauth 1993 New procedure for determining reactive Fe(III) and Fe(II) minerals in sediments Limnol Oceanogr 38 1083 1812
    • (1993) Limnol Oceanogr , vol.38 , pp. 1083-1812
    • Wallmann, K.1    Hennies, K.2    König, I.3    Petersen, W.4    Knauth, H.D.5
  • 65
  • 66
    • 0036048654 scopus 로고    scopus 로고
    • Functional groups and activities of bacteria in a highly acidic volcanic mountain stream and lake in Patagonia, Argentina
    • K Wendt-Potthoff M Koschorreck 2002 Functional groups and activities of bacteria in a highly acidic volcanic mountain stream and lake in Patagonia, Argentina Microb Ecol 43 92 106
    • (2002) Microb Ecol , vol.43 , pp. 92-106
    • Wendt-Potthoff, K.1    Koschorreck, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.