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Volumn 72, Issue 3, 2006, Pages 2022-2030

Macroscopic streamer growths in acidic, metal-rich mine waters in North Wales consist of novel and remarkably simple bacterial communities

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIODIVERSITY; BIOFILMS; COMPOSITION; COPPER MINES; FLUORESCENCE; GENES; LIBRARIES; MICROORGANISMS; MINES;

EID: 33644950982     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.72.3.2022-2030.2006     Document Type: Article
Times cited : (195)

References (37)
  • 1
    • 0036672093 scopus 로고    scopus 로고
    • Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysis
    • Alfreider, A., C. Vogt, and W. Babel. 2002. Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysis. Syst. Appl. Microbiol. 25:232-240.
    • (2002) Syst. Appl. Microbiol. , vol.25 , pp. 232-240
    • Alfreider, A.1    Vogt, C.2    Babel, W.3
  • 3
    • 0025099312 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
    • Amann, R. I., L. Krumholz, and D. A. Stahl. 1990. Fluorescent- oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172:762-770.
    • (1990) J. Bacteriol. , vol.172 , pp. 762-770
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 4
    • 0037447834 scopus 로고    scopus 로고
    • Microbial communities in acid mine drainage
    • Baker, B. J., and J. F. Banfield. 2003. Microbial communities in acid mine drainage. FEMS Microbiol. Ecol. 44:139-152.
    • (2003) FEMS Microbiol. Ecol. , vol.44 , pp. 139-152
    • Baker, B.J.1    Banfield, J.F.2
  • 5
    • 0034992824 scopus 로고    scopus 로고
    • Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments
    • Bond, P. L., and J. F. Banfield. 2001. Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments. Microb. Ecol. 41:149-161.
    • (2001) Microb. Ecol. , vol.41 , pp. 149-161
    • Bond, P.L.1    Banfield, J.F.2
  • 6
    • 0033754225 scopus 로고    scopus 로고
    • Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems
    • Bond, P. L., G. K. Druschel, and J. F. Banfield. 2000. Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems. Appl. Environ. Microbiol. 66:4962-4971.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4962-4971
    • Bond, P.L.1    Druschel, G.K.2    Banfield, J.F.3
  • 7
    • 0033831747 scopus 로고    scopus 로고
    • Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site
    • Bond, P. L., S. P. Smriga, and J. F. Banfield. 2000. Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site. Appl. Environ. Microbiol. 66:3842-3849.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3842-3849
    • Bond, P.L.1    Smriga, S.P.2    Banfield, J.F.3
  • 8
    • 0001506104 scopus 로고    scopus 로고
    • Modulation of non-templated nucleotide addition by Taq DNA polymerase: Primer modifications that facilitate genotyping
    • Brownstein, M. J., J. D. Carpten, and J. R. Smith. 1996. Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping. BioTechniques 20:1004-1010.
    • (1996) BioTechniques , vol.20 , pp. 1004-1010
    • Brownstein, M.J.1    Carpten, J.D.2    Smith, J.R.3
  • 9
    • 33644940187 scopus 로고    scopus 로고
    • Oxidation of iron, sulfur and arsenic in mine waters and mine wastes: An important role for novel Thiomonas spp.
    • M. Tsezos, A. Hatzikioseyian, and E. Remoudaki (ed.). National Technical University of Athens, Zografou, Greece
    • Coupland, K., F. Battaglia-Brunet, K. B. Hallberg, M. C. Dictor, F. Garrido, and D. B. Johnson. 2004. Oxidation of iron, sulfur and arsenic in mine waters and mine wastes: an important role for novel Thiomonas spp., p. 639-646. In M. Tsezos, A. Hatzikioseyian, and E. Remoudaki (ed.), Biohydrometallurgy: a sustainable technology in evolution. National Technical University of Athens, Zografou, Greece.
    • (2004) Biohydrometallurgy: A Sustainable Technology in Evolution , pp. 639-646
    • Coupland, K.1    Battaglia-Brunet, F.2    Hallberg, K.B.3    Dictor, M.C.4    Garrido, F.5    Johnson, D.B.6
  • 11
    • 0014752876 scopus 로고
    • Aerobic heterotrophic bacteria indigenous to pH 2.8 mine water: Predominant slime-producing bacteria in acid streamers
    • Dugan, P. R., C. B. Macmillan, and R. M. Pfister. 1970. Aerobic heterotrophic bacteria indigenous to pH 2.8 mine water: predominant slime-producing bacteria in acid streamers. J. Bacteriol. 101:982-988.
    • (1970) J. Bacteriol. , vol.101 , pp. 982-988
    • Dugan, P.R.1    Macmillan, C.B.2    Pfister, R.M.3
  • 12
    • 0034629254 scopus 로고    scopus 로고
    • An archaeal iron-oxidizing extreme acidophile important in acid mine drainage
    • Edwards, K. J., P. L. Bond, T. M. Gihring, and J. F. Banfield. 2000. An archaeal iron-oxidizing extreme acidophile important in acid mine drainage. Science 287:1796-1799.
    • (2000) Science , vol.287 , pp. 1796-1799
    • Edwards, K.J.1    Bond, P.L.2    Gihring, T.M.3    Banfield, J.F.4
  • 14
    • 0033855457 scopus 로고    scopus 로고
    • Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes
    • Fuchs, B. M., F. O. Glockner, J. Wulf, and R. Amann. 2000. Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes. Appl. Environ. Microbiol. 66:3603-3607.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3603-3607
    • Fuchs, B.M.1    Glockner, F.O.2    Wulf, J.3    Amann, R.4
  • 16
    • 0026052098 scopus 로고
    • Autotrophic and mixotrophic growth of Gallionella ferruginea
    • Hallbeck, L., and K. Pedersen. 1991. Autotrophic and mixotrophic growth of Gallionella ferruginea. J. Gen. Microbiol. 137:2657-2661.
    • (1991) J. Gen. Microbiol. , vol.137 , pp. 2657-2661
    • Hallbeck, L.1    Pedersen, K.2
  • 17
    • 0027183728 scopus 로고
    • Phylogeny and phenotypic characterization of the stalk-forming and iron-oxidizing bacterium Gallionella ferruginea
    • Hallbeck, L., F. Stahl, and K. Pedersen. 1993. Phylogeny and phenotypic characterization of the stalk-forming and iron-oxidizing bacterium Gallionella ferruginea. J. Gen. Microbiol. 139:1531-1535.
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 1531-1535
    • Hallbeck, L.1    Stahl, F.2    Pedersen, K.3
  • 18
    • 0034749892 scopus 로고    scopus 로고
    • Biodiversity of acidophilic microorganisms
    • Hallberg, K. B., and D. B. Johnson. 2001. Biodiversity of acidophilic microorganisms. Adv. Appl. Microbiol. 49:37-84.
    • (2001) Adv. Appl. Microbiol. , vol.49 , pp. 37-84
    • Hallberg, K.B.1    Johnson, D.B.2
  • 19
    • 0141938368 scopus 로고    scopus 로고
    • Novel acidophiles isolated from moderately acidic mine drainage waters
    • Hallberg, K. B., and D. B. Johnson. 2003. Novel acidophiles isolated from moderately acidic mine drainage waters. Hydrometallurgy 71:139-148.
    • (2003) Hydrometallurgy , vol.71 , pp. 139-148
    • Hallberg, K.B.1    Johnson, D.B.2
  • 20
    • 0031982528 scopus 로고    scopus 로고
    • Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microorganisms
    • Head, I. M., J. R. Saunders, and R. W. Pickup. 1998. Microbial evolution, diversity, and ecology: a decade of ribosomal RNA analysis of uncultivated microorganisms. Microb. Ecol. 35:1-21.
    • (1998) Microb. Ecol. , vol.35 , pp. 1-21
    • Head, I.M.1    Saunders, J.R.2    Pickup, R.W.3
  • 21
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., B. M. Goebel, and N. R. Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180:4765-4774.
    • (1998) J. Bacteriol. , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 22
    • 0342318821 scopus 로고
    • Abandoned metal mines: A unique mineralogical and microbiological resource
    • Jenkins, D. A., and D. B. Johnson. 1993. Abandoned metal mines: a unique mineralogical and microbiological resource. J. Russell Soc. 5:40-44.
    • (1993) J. Russell Soc. , vol.5 , pp. 40-44
    • Jenkins, D.A.1    Johnson, D.B.2
  • 23
    • 0029090674 scopus 로고
    • Selective solid media for isolating and enumerating acidophilic bacteria
    • Johnson, D. B. 1995. Selective solid media for isolating and enumerating acidophilic bacteria. J. Microbiol. Methods 23:205-218.
    • (1995) J. Microbiol. Methods , vol.23 , pp. 205-218
    • Johnson, D.B.1
  • 24
    • 0026616562 scopus 로고
    • Isolation and characterization of an acidophilic, heterotrophic bacterium capable of oxidizing ferrous iron
    • Johnson, D. B., M. A. Ghauri, and M. F. Said. 1992. Isolation and characterization of an acidophilic, heterotrophic bacterium capable of oxidizing ferrous iron. Appl. Environ. Microbiol. 58:1423-1428.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1423-1428
    • Johnson, D.B.1    Ghauri, M.A.2    Said, M.F.3
  • 25
    • 11844264880 scopus 로고    scopus 로고
    • Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis (ARDREA)
    • Johnson, D. B., N. Okibe, and K. B. Hallberg. 2005. Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis (ARDREA). J. Microbiol. Methods 60:299-313.
    • (2005) J. Microbiol. Methods , vol.60 , pp. 299-313
    • Johnson, D.B.1    Okibe, N.2    Hallberg, K.B.3
  • 26
    • 0000875551 scopus 로고
    • The flora and fauna of surface waters polluted by acid mine drainage
    • Lackey, J. B. 1938. The flora and fauna of surface waters polluted by acid mine drainage. Public Health Rep. 53:1499-1507.
    • (1938) Public Health Rep. , vol.53 , pp. 1499-1507
    • Lackey, J.B.1
  • 27
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow (ed.). John Wiley and Sons, New York, N.Y.
    • Lane, D. J. 1991. 16S/23S rRNA sequencing, p. 115-175. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley and Sons, New York, N.Y.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 28
    • 2942555663 scopus 로고    scopus 로고
    • Macrofilamentous microbial communities in the metal-rich and acidic River Tinto, Spain
    • Lopez-Archilla, A. I., E. Gerard, D. Moreira, and P. Lopez-Garcia. 2004. Macrofilamentous microbial communities in the metal-rich and acidic River Tinto, Spain. FEMS Microbiol. Lett. 235:221-228.
    • (2004) FEMS Microbiol. Lett. , vol.235 , pp. 221-228
    • Lopez-Archilla, A.I.1    Gerard, E.2    Moreira, D.3    Lopez-Garcia, P.4
  • 29
    • 0000816704 scopus 로고
    • Rapid assay for microbially reduced ferric iron in aquatic sediments
    • Lovley, D. R., and E. J. P. Phillips. 1987. Rapid assay for microbially reduced ferric iron in aquatic sediments. Appl. Environ. Microbiol. 53:1536-1540.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 1536-1540
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 30
    • 0025084676 scopus 로고
    • Lithoautotrophic growth of the iron bacterium Gallionella ferruginea with thiosulfate or sulfide as energy-source
    • Lütters-Czekalla, S. 1990. Lithoautotrophic growth of the iron bacterium Gallionella ferruginea with thiosulfate or sulfide as energy-source. Arch. Microbiol. 154:417-421.
    • (1990) Arch. Microbiol. , vol.154 , pp. 417-421
    • Lütters-Czekalla, S.1
  • 31
    • 0027068041 scopus 로고
    • Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions
    • Manz, W., R. Amann, W. Ludwig, M. Wagner, and K. H. Schleifer. 1992. Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst. Appl. Microbiol. 15:593-600.
    • (1992) Syst. Appl. Microbiol. , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Wagner, M.4    Schleifer, K.H.5
  • 32
    • 0027341530 scopus 로고
    • Seasonal variations in the microbiology and chemistry of an acid mine drainage stream
    • McGinness, S., and D. B. Johnson. 1993. Seasonal variations in the microbiology and chemistry of an acid mine drainage stream. Sci. Tot. Environ. 132:27-41.
    • (1993) Sci. Tot. Environ. , vol.132 , pp. 27-41
    • McGinness, S.1    Johnson, D.B.2
  • 33
    • 0242668356 scopus 로고    scopus 로고
    • Enumeration and characterization of acidophilic microorganisms isolated from a pilot plant stirred tank bioleaching operation
    • Okibe, N., M. Gericke, K. B. Hallberg, and D. B. Johnson. 2003. Enumeration and characterization of acidophilic microorganisms isolated from a pilot plant stirred tank bioleaching operation. Appl. Environ. Microbiol. 69:1936-1943.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1936-1943
    • Okibe, N.1    Gericke, M.2    Hallberg, K.B.3    Johnson, D.B.4
  • 34
    • 0021971186 scopus 로고
    • A new medium for the enumeration and subculture of bacteria from potable water
    • Reasoner, D. J., and E. E. Geldreich. 1985. A new medium for the enumeration and subculture of bacteria from potable water. Appl. Environ. Microbiol. 49:1-7.
    • (1985) Appl. Environ. Microbiol. , vol.49 , pp. 1-7
    • Reasoner, D.J.1    Geldreich, E.E.2
  • 35
    • 0032489630 scopus 로고    scopus 로고
    • Distribution of Thiobacillus ferrooxidans and Leptospirillum ferrooxidans: Implications for generation of acid mine drainage
    • Schrenk, M. O., K. J. Edwards, R. M. Goodman, R. J. Hamers, and J. F. Banfield. 1998. Distribution of Thiobacillus ferrooxidans and Leptospirillum ferrooxidans: implications for generation of acid mine drainage. Science 279:1519-1522.
    • (1998) Science , vol.279 , pp. 1519-1522
    • Schrenk, M.O.1    Edwards, K.J.2    Goodman, R.M.3    Hamers, R.J.4    Banfield, J.F.5
  • 36
    • 0003341851 scopus 로고
    • Development and application of nucleic acid probes in bacterial systematics
    • E. Stackebrandt and M. Goodfellow (ed.). John Wiley and Sons, New York, N.Y.
    • Stahl, D. A., and R. Amann. 1991. Development and application of nucleic acid probes in bacterial systematics, p. 205-248. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley and Sons, New York, N.Y.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 205-248
    • Stahl, D.A.1    Amann, R.2
  • 37
    • 85008138107 scopus 로고
    • Morphological and physiological characteristics of streamers in acid mine drainage water from a pyritic mine
    • Wakao, N., H. Tachibana, Y. Tanaka, Y. Sakurai, and H. Shiota. 1985. Morphological and physiological characteristics of streamers in acid mine drainage water from a pyritic mine. J. Gen. Appl. Microbiol. 31:17-28.
    • (1985) J. Gen. Appl. Microbiol. , vol.31 , pp. 17-28
    • Wakao, N.1    Tachibana, H.2    Tanaka, Y.3    Sakurai, Y.4    Shiota, H.5


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