-
1
-
-
0023395661
-
Structure of the reaction center from Rhodobacter sphaeroides R-26: The cofactors
-
Allen, J. P., Feher, G., Yeates, T. O., Komiya, H. & Rees, D. C. (1987). Structure of the reaction center from Rhodobacter sphaeroides R-26: the cofactors. Proc Natl Acad Sci USA 84, 5730-5734.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 5730-5734
-
-
Allen, J.P.1
Feher, G.2
Yeates, T.O.3
Komiya, H.4
Rees, D.C.5
-
2
-
-
1842362290
-
Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
-
Brosius, J, Palmer, J. L., Kennedy, J. P. & Noller, H. F. (1978). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci USA 75, 4801-4805.
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, pp. 4801-4805
-
-
Brosius, J.1
Palmer, J.L.2
Kennedy, J.P.3
Noller, H.F.4
-
3
-
-
0028957690
-
Crystallographic refinement at 2-3 Å resolution and refined model of the photosynthetic reaction centre from Rhodopseudomonas viridis
-
Deisenhofer, J., Epp, O., Sinning, I. & Michel, H. (1995). Crystallographic refinement at 2-3 Å resolution and refined model of the photosynthetic reaction centre from Rhodopseudomonas viridis. J Mol Biol 246, 429-457.
-
(1995)
J Mol Biol
, vol.246
, pp. 429-457
-
-
Deisenhofer, J.1
Epp, O.2
Sinning, I.3
Michel, H.4
-
4
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
5
-
-
0016658935
-
Thiobacillus acidophilus sp. nov.; isolation and some physiological characteristics
-
Quay, R. & Silver, M. (1975). Thiobacillus acidophilus sp. nov.; isolation and some physiological characteristics. Can J Microbiol 21, 281-288.
-
(1975)
Can J Microbiol
, vol.21
, pp. 281-288
-
-
Quay, R.1
Silver, M.2
-
6
-
-
0020585904
-
Genomic and physiological comparisons between heterotrophic thiobacilli and Acidiphilium cryptum, Thiobacillus versutus sp. nov., and Thiobacillus acidophilus nom. rev.
-
Harrison, A. P., Jr (1983). Genomic and physiological comparisons between heterotrophic thiobacilli and Acidiphilium cryptum, Thiobacillus versutus sp. nov., and Thiobacillus acidophilus nom. rev. Int J Syst Bacteriol 33, 211-217.
-
(1983)
Int J Syst Bacteriol
, vol.33
, pp. 211-217
-
-
Harrison Jr., A.P.1
-
7
-
-
0021227370
-
The acidophilic thiobacilli and other acidophilic bacteria that share their habitat
-
Harrison, A. P., Jr (1984). The acidophilic thiobacilli and other acidophilic bacteria that share their habitat. Annu Rev Microbiol 38, 265-292.
-
(1984)
Annu Rev Microbiol
, vol.38
, pp. 265-292
-
-
Harrison Jr., A.P.1
-
8
-
-
84911794799
-
AL
-
Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore: Williams & Wilkins
-
AL. In Bergey's Manual of Systematic Bacteriology, vol. 3, pp. 1863-1868. Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore: Williams & Wilkins.
-
(1989)
Bergey's Manual of Systematic Bacteriology
, vol.3
, pp. 1863-1868
-
-
Harrison Jr., A.P.1
-
9
-
-
85008070154
-
Distribution of phototrophic purple nonsulfur bacteria in activated sludge systems and other aquatic environments
-
Hiraishi, A. & Kitamura, H. (1984). Distribution of phototrophic purple nonsulfur bacteria in activated sludge systems and other aquatic environments. Bull Jpn Soc Sci Fish 50, 1929-1937.
-
(1984)
Bull Jpn Soc Sci Fish
, vol.50
, pp. 1929-1937
-
-
Hiraishi, A.1
Kitamura, H.2
-
10
-
-
0025975919
-
Rhodoferax fermentans gen. nov., sp. nov., a phototrophic purple nonsulfur bacterium previously referred to as the "Rhodocyclus gelatinosus-like" group
-
Hiraishi, A., Hoshino, Y. & Satoh, T. (1991). Rhodoferax fermentans gen. nov., sp. nov., a phototrophic purple nonsulfur bacterium previously referred to as the "Rhodocyclus gelatinosus-like" group. Arch Microbiol 155, 330-336.
-
(1991)
Arch Microbiol
, vol.155
, pp. 330-336
-
-
Hiraishi, A.1
Hoshino, Y.2
Satoh, T.3
-
11
-
-
0028064005
-
Automated sequencing of PCR-amplifled 16S rDNA on "Hydrolink" gels
-
Hiraishi, A., Shin, Y. K., Ueda, Y. & Sugiyama, J. (1994). Automated sequencing of PCR-amplifled 16S rDNA on "Hydrolink" gels. J Microbiol Methods 19, 145-154.
-
(1994)
J Microbiol Methods
, vol.19
, pp. 145-154
-
-
Hiraishi, A.1
Shin, Y.K.2
Ueda, Y.3
Sugiyama, J.4
-
12
-
-
0029115109
-
Polymerase chain reaction amplification and restriction fragment length polymorphism analysis of 16S rRNA genes from methanogens
-
Hiraishi, A., Kamagata, Y. & Nakamura, K. (1995). Polymerase chain reaction amplification and restriction fragment length polymorphism analysis of 16S rRNA genes from methanogens. J Ferment Bioeng 79, 523-529.
-
(1995)
J Ferment Bioeng
, vol.79
, pp. 523-529
-
-
Hiraishi, A.1
Kamagata, Y.2
Nakamura, K.3
-
13
-
-
0019907527
-
Ubiquinone, fatty acid and DNA base composition determination as a guide to the taxonomy of the genus Thiobacillus
-
Katayama-Fujimura, Y., Tsuzaki, N. & Kuraishi, H. (1982). Ubiquinone, fatty acid and DNA base composition determination as a guide to the taxonomy of the genus Thiobacillus. J Gen Microbiol 128, 1599-1611.
-
(1982)
J Gen Microbiol
, vol.128
, pp. 1599-1611
-
-
Katayama-Fujimura, Y.1
Tsuzaki, N.2
Kuraishi, H.3
-
14
-
-
0021075288
-
Deoxyribonucleic acid homologies among species of the genus Thiobacillus
-
Katayama-Fujimura, Y., Enokizono, Y., Kaneko, T. & Kuraishi, H. (1983). Deoxyribonucleic acid homologies among species of the genus Thiobacillus. J Gen Appl Microbiol 29, 287-295.
-
(1983)
J Gen Appl Microbiol
, vol.29
, pp. 287-295
-
-
Katayama-Fujimura, Y.1
Enokizono, Y.2
Kaneko, T.3
Kuraishi, H.4
-
15
-
-
0021690123
-
Polyhedral inclusion bodies (carboxysomes) in Thiobacillus species with reference to the taxonomy of the genus Thiobacillus
-
Katayama-Fujimura, Y., Kawashima, I., Tsuzaki, N. & Kuraishi, H. (1984). Polyhedral inclusion bodies (carboxysomes) in Thiobacillus species with reference to the taxonomy of the genus Thiobacillus. J Gen Appl Microbiol 30, 211-222.
-
(1984)
J Gen Appl Microbiol
, vol.30
, pp. 211-222
-
-
Katayama-Fujimura, Y.1
Kawashima, I.2
Tsuzaki, N.3
Kuraishi, H.4
-
16
-
-
0000650063
-
AL
-
Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore: Williams & Wilkins
-
AL. In Bergey's Manual of Systematic Bacteriology, vol. 3, pp. 1842-1858. Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore: Williams & Wilkins.
-
(1989)
Bergey's Manual of Systematic Bacteriology
, vol.3
, pp. 1842-1858
-
-
Kelly, D.P.1
Harrison Jr., A.P.2
-
17
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0029020116
-
Transfer of Acidiphilium facilis and Acidiphilium aminolytica to the genus Acidocella gen. nov., and emendation of the genus Acidiphilium
-
Kishimoto, N., Kosako, Y., Wakao, N., Tano, T. & Hiraishi, A. (1995b). Transfer of Acidiphilium facilis and Acidiphilium aminolytica to the genus Acidocella gen. nov., and emendation of the genus Acidiphilium. Syst Appl Microbiol 18, 85-91.
-
(1995)
Syst Appl Microbiol
, vol.18
, pp. 85-91
-
-
Kishimoto, N.1
Kosako, Y.2
Wakao, N.3
Tano, T.4
Hiraishi, A.5
-
20
-
-
0025372718
-
Rapid and reliable protocol for direct sequencing of material amplified by the polymerase chain reaction
-
Kusukawa, N., Uemori, T., Asada, K. & Kato, I. (1990). Rapid and reliable protocol for direct sequencing of material amplified by the polymerase chain reaction. BioTechniques 9, 66-72.
-
(1990)
BioTechniques
, vol.9
, pp. 66-72
-
-
Kusukawa, N.1
Uemori, T.2
Asada, K.3
Kato, I.4
-
21
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
22
-
-
0026537242
-
Evolutionary relationships among sulfur- and iron-oxidizing eubacteria
-
Lane, D. J., Harrison, A. P., Jr, Stahl, D., Pace, B., Giovannoni, S. J., Olsen, G. J. & Pace, N. R. (1992). Evolutionary relationships among sulfur-and iron-oxidizing eubacteria. J Bacteriol 174, 269-278.
-
(1992)
J Bacteriol
, vol.174
, pp. 269-278
-
-
Lane, D.J.1
Harrison Jr., A.P.2
Stahl, D.3
Pace, B.4
Giovannoni, S.J.5
Olsen, G.J.6
Pace, N.R.7
-
23
-
-
0021828769
-
Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences
-
Lane, D. J., Stahl, D. A., Olsen, G. J., Heller, D. J. & Pace, N. R. (1985). Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences. J Bacteriol 163, 75-81.
-
(1985)
J Bacteriol
, vol.163
, pp. 75-81
-
-
Lane, D.J.1
Stahl, D.A.2
Olsen, G.J.3
Heller, D.J.4
Pace, N.R.5
-
24
-
-
0022600944
-
Acidiphilium organovorum sp. nov., an acidophilic heterotroph isolated from a Thiobacillus ferrooxidans culture
-
Lobos, J. H., Chisolm, T. E., Bopp, L. H. & Holms, D. S. (1986). Acidiphilium organovorum sp. nov., an acidophilic heterotroph isolated from a Thiobacillus ferrooxidans culture. Int J Syst Bacteriol 36, 139-144.
-
(1986)
Int J Syst Bacteriol
, vol.36
, pp. 139-144
-
-
Lobos, J.H.1
Chisolm, T.E.2
Bopp, L.H.3
Holms, D.S.4
-
25
-
-
0025982062
-
Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products
-
Marchuk, D., Drumm, M., Saulino, A. & Collins, F. S. (1991). Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucleic Acids Res 19, 1154.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 1154
-
-
Marchuk, D.1
Drumm, M.2
Saulino, A.3
Collins, F.S.4
-
26
-
-
0015920925
-
A new mixotrophic sulfur bacterium developing in acid media, Thiobacillus organoparus sp. n.
-
in Russian
-
Markosyan, G. E. (1973). A new mixotrophic sulfur bacterium developing in acid media, Thiobacillus organoparus sp. n. Dokl Akad Nauk SSSR 211, 1205-1208 (in Russian).
-
(1973)
Dokl Akad Nauk SSSR
, vol.211
, pp. 1205-1208
-
-
Markosyan, G.E.1
-
27
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from micro-organisms
-
Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3, 208-218.
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
28
-
-
0023274379
-
Chemolithotrophic and autotrophic growth of Thermothrix thiopara and some thiobacilli on thiosulphate and polythionates, and a reassessment of the growth yields of Thx. thiopara in chemostat culture
-
Mason, J., Kelly, D. P. & Wood, A. P. (1987). Chemolithotrophic and autotrophic growth of Thermothrix thiopara and some thiobacilli on thiosulphate and polythionates, and a reassessment of the growth yields of Thx. thiopara in chemostat culture. J Gen Microbiol 133, 1249-1256.
-
(1987)
J Gen Microbiol
, vol.133
, pp. 1249-1256
-
-
Mason, J.1
Kelly, D.P.2
Wood, A.P.3
-
29
-
-
0006896022
-
Oxidation of reduced sulfur compounds by intact cells of Thiobacillus acidophilus
-
Meulenberg, R., Pronk, J. T., Hazeu, W., Bos, P. & Kuenen, J. G. (1992). Oxidation of reduced sulfur compounds by intact cells of Thiobacillus acidophilus. J Bacteriol 150, 582-591.
-
(1992)
J Bacteriol
, vol.150
, pp. 582-591
-
-
Meulenberg, R.1
Pronk, J.T.2
Hazeu, W.3
Bos, P.4
Kuenen, J.G.5
-
30
-
-
0030879863
-
Horizontal transfer of genes coding for the photosynthetic reaction centers of purple bacteria
-
Nagashima, K. V. P., Hiraishi, A., Shimada, K. & Matsuura, K. (1997a). Horizontal transfer of genes coding for the photosynthetic reaction centers of purple bacteria. J Mol Evol 45, 131-136.
-
(1997)
J Mol Evol
, vol.45
, pp. 131-136
-
-
Nagashima, K.V.P.1
Hiraishi, A.2
Shimada, K.3
Matsuura, K.4
-
31
-
-
0031266281
-
Nucleotide sequences of genes coding for photosynthetic reaction centers and light-harvesting proteins of Acidiphilium rubrum and related aerobic acidophilic bacteria
-
Nagashima, K. V. P., Matsuura, K., Wakao, N., Hiraishi, A. & Shimada, K. (1997b). Nucleotide sequences of genes coding for photosynthetic reaction centers and light-harvesting proteins of Acidiphilium rubrum and related aerobic acidophilic bacteria. Plant Cell Physiol 38, 1249-1258.
-
(1997)
Plant Cell Physiol
, vol.38
, pp. 1249-1258
-
-
Nagashima, K.V.P.1
Matsuura, K.2
Wakao, N.3
Hiraishi, A.4
Shimada, K.5
-
32
-
-
0242489022
-
Growth of mesophilic and thermophilic acidophilic bacteria on sulfur and tetrathionate
-
Norris, P. R., Marsh, R. M. & Lindstrom, E. B. (1986). Growth of mesophilic and thermophilic acidophilic bacteria on sulfur and tetrathionate. Biotechnol Appl Biochem 8, 318-329.
-
(1986)
Biotechnol Appl Biochem
, vol.8
, pp. 318-329
-
-
Norris, P.R.1
Marsh, R.M.2
Lindstrom, E.B.3
-
33
-
-
0025296572
-
Oxidation of reduced inorganic sulfur compounds by acidophilic thiobacilli
-
Pronk, J. T., Meulenberg, R., Hazeu, W., Bos, P. & Kuenen, J. G. (1990). Oxidation of reduced inorganic sulfur compounds by acidophilic thiobacilli. FEMS Microbiol Rev 75, 293-306.
-
(1990)
FEMS Microbiol Rev
, vol.75
, pp. 293-306
-
-
Pronk, J.T.1
Meulenberg, R.2
Hazeu, W.3
Bos, P.4
Kuenen, J.G.5
-
34
-
-
0023375195
-
The neighbor-joining method : A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method : a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
35
-
-
0003903343
-
-
Cold Spring Harbor, NY : Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY : Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
36
-
-
0002773661
-
Aerobic anoxygenic phototrophs
-
Edited by R. E. Blankenship, M. T. Madigan & C. E. Bauer. Dordrecht: Kluwer
-
Shimada, K. (1995). Aerobic anoxygenic phototrophs. In Anoxygenic Photosynthetic Bacteria, pp. 105-122. Edited by R. E. Blankenship, M. T. Madigan & C. E. Bauer. Dordrecht: Kluwer.
-
(1995)
Anoxygenic Photosynthetic Bacteria
, pp. 105-122
-
-
Shimada, K.1
-
37
-
-
0028049020
-
Phylogenetic positioning of Acetobacter, Gluconobacter, Rhodopila, and Acidiphilium species as a branch of acidophilic bacteria in the α-subclass of Proteobacteria based on 16S ribosomal DNA sequences
-
Sievers, M., Ludwig, W. & Teuber, M. (1994). Phylogenetic positioning of Acetobacter, Gluconobacter, Rhodopila, and Acidiphilium species as a branch of acidophilic bacteria in the α-subclass of Proteobacteria based on 16S ribosomal DNA sequences. Syst Appl Microbiol 17, 189-196.
-
(1994)
Syst Appl Microbiol
, vol.17
, pp. 189-196
-
-
Sievers, M.1
Ludwig, W.2
Teuber, M.3
-
38
-
-
0018839477
-
Approved lists of bacterial names
-
Skerman, V. B. D., McGowan, V. & Sneath, P. H. A. (1980). Approved lists of bacterial names. Int J Syst Bacteriol 30, 225-420.
-
(1980)
Int J Syst Bacteriol
, vol.30
, pp. 225-420
-
-
Skerman, V.B.D.1
McGowan, V.2
Sneath, P.H.A.3
-
39
-
-
84989085016
-
Usefulness of field desorption mass spectrometry in determining molecular masses of carotenoids, natural carotenoid derivatives and their chemical derivatives
-
Takaichi, S. (1993). Usefulness of field desorption mass spectrometry in determining molecular masses of carotenoids, natural carotenoid derivatives and their chemical derivatives. Org Mass Spectrom 28, 785-788.
-
(1993)
Org Mass Spectrom
, vol.28
, pp. 785-788
-
-
Takaichi, S.1
-
40
-
-
0026678601
-
Characterization of carotenoids in photosynthetic bacteria
-
Takaichi, S. & Shimada, K. (1992). Characterization of carotenoids in photosynthetic bacteria. Methods Enzymol 213, 374-385.
-
(1992)
Methods Enzymol
, vol.213
, pp. 374-385
-
-
Takaichi, S.1
Shimada, K.2
-
41
-
-
0027968068
-
CLUSTAL w : Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1991). CLUSTAL w : improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1991)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
42
-
-
0027361858
-
Distribution of bacteriochlorophyll a in species of the genus Acidiphilium
-
Wakao, N., Shiba, T., Hiraishi, A., Ito, M. & Sakurai, Y. (1993). Distribution of bacteriochlorophyll a in species of the genus Acidiphilium. Curr Microbiol 27, 277-279.
-
(1993)
Curr Microbiol
, vol.27
, pp. 277-279
-
-
Wakao, N.1
Shiba, T.2
Hiraishi, A.3
Ito, M.4
Sakurai, Y.5
-
43
-
-
0028136296
-
Acidiphilium multivorum sp. nov., an acidophilic chemoorganotrophic bacterium from pyritic acid mine drainage
-
Wakao, N., Nagasawa, N., Matsuura, T., Matsukura, H., Matsumoto, T., Hiraishi, A., Sakurai, Y. & Shiota, H. (1994). Acidiphilium multivorum sp. nov., an acidophilic chemoorganotrophic bacterium from pyritic acid mine drainage. J Gen Appl Microbiol 40, 143-159.
-
(1994)
J Gen Appl Microbiol
, vol.40
, pp. 143-159
-
-
Wakao, N.1
Nagasawa, N.2
Matsuura, T.3
Matsukura, H.4
Matsumoto, T.5
Hiraishi, A.6
Sakurai, Y.7
Shiota, H.8
-
44
-
-
10544255342
-
Discovery of natural photosynthesis using zinc-containing bacteriochlorophyll in an aerobic bacterium Acidiphilium rubrum
-
Wakao, N., Yokoi, N., Isoyama, N. & 8 other authors (1996). Discovery of natural photosynthesis using zinc-containing bacteriochlorophyll in an aerobic bacterium Acidiphilium rubrum. Plant Cell Physiol 37, 889-893.
-
(1996)
Plant Cell Physiol
, vol.37
, pp. 889-893
-
-
Wakao, N.1
Yokoi, N.2
Isoyama, N.3
|