-
1
-
-
0032749078
-
Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm
-
Wright P.E., and Dyson H.J. Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J. Mol. Biol. 293 (1999) 321-331
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
2
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions?
-
Uversky V.N., Gillespie J.R., and Fink A.L. Why are "natively unfolded" proteins unstructured under physiologic conditions?. Proteins 41 (2000) 415-427
-
(2000)
Proteins
, vol.41
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
3
-
-
0036128797
-
Natively unfolded proteins: a point where biology waits for physics
-
Uversky V.N. Natively unfolded proteins: a point where biology waits for physics. Protein Sci. 11 (2002) 739-756
-
(2002)
Protein Sci.
, vol.11
, pp. 739-756
-
-
Uversky, V.N.1
-
4
-
-
0036803243
-
Intrinsically unstructured proteins
-
Tompa P. Intrinsically unstructured proteins. Trends Biochem. Sci. 27 (2002) 527-533
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 527-533
-
-
Tompa, P.1
-
5
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson H.J., and Wright P.E. Intrinsically unstructured proteins and their functions. Nat. Rev. Mol. Cell Biol. 6 (2005) 197-208
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
6
-
-
20444376186
-
The interplay between structure and function in intrinsically unstructured proteins
-
Tompa P. The interplay between structure and function in intrinsically unstructured proteins. FEBS Lett. 579 (2005) 3346-3354
-
(2005)
FEBS Lett.
, vol.579
, pp. 3346-3354
-
-
Tompa, P.1
-
7
-
-
0034867975
-
The protein trinity-linking function and disorder
-
Dunker A.K., and Obradovic Z. The protein trinity-linking function and disorder. Nat. Biotechnol. 19 (2001) 805-806
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 805-806
-
-
Dunker, A.K.1
Obradovic, Z.2
-
8
-
-
25144472591
-
Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling
-
Uversky V.N., Oldfield C.J., and Dunker A.K. Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling. J. Mol. Recognit. 18 (2005) 343-384
-
(2005)
J. Mol. Recognit.
, vol.18
, pp. 343-384
-
-
Uversky, V.N.1
Oldfield, C.J.2
Dunker, A.K.3
-
9
-
-
0030575937
-
Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain
-
Kussie P.H., Gorina S., Marechal V., Elenbaas B., Moreau J., Levine A.J., and Pavletich N.P. Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain. Science 274 (1996) 948-953
-
(1996)
Science
, vol.274
, pp. 948-953
-
-
Kussie, P.H.1
Gorina, S.2
Marechal, V.3
Elenbaas, B.4
Moreau, J.5
Levine, A.J.6
Pavletich, N.P.7
-
11
-
-
0032479055
-
Conformational preferences in the Ser133-phosphorylated and non-phosphorylated forms of the kinase inducible transactivation domain of CREB
-
Radhakrishnan I., Perez-Alvarado G.C., Dyson H.J., and Wright P.E. Conformational preferences in the Ser133-phosphorylated and non-phosphorylated forms of the kinase inducible transactivation domain of CREB. FEBS Lett. 430 (1998) 317-322
-
(1998)
FEBS Lett.
, vol.430
, pp. 317-322
-
-
Radhakrishnan, I.1
Perez-Alvarado, G.C.2
Dyson, H.J.3
Wright, P.E.4
-
12
-
-
24344482544
-
CREB: the unindicted cancer co-conspirator
-
Conkright M.D., and Montminy M. CREB: the unindicted cancer co-conspirator. Trends Cell Biol. 15 (2005) 457-459
-
(2005)
Trends Cell Biol.
, vol.15
, pp. 457-459
-
-
Conkright, M.D.1
Montminy, M.2
-
14
-
-
0036468397
-
Coupling of folding and binding for unstructured proteins
-
Dyson H.J., and Wright P.E. Coupling of folding and binding for unstructured proteins. Curr. Opin. Struct. Biol. 12 (2002) 54-60
-
(2002)
Curr. Opin. Struct. Biol.
, vol.12
, pp. 54-60
-
-
Dyson, H.J.1
Wright, P.E.2
-
15
-
-
30344432688
-
Assessing protein disorder and induced folding
-
Receveur-Brechot V., Bourhis J.M., Uversky V.N., Canard B., and Longhi S. Assessing protein disorder and induced folding. Proteins 62 (2006) 24-45
-
(2006)
Proteins
, vol.62
, pp. 24-45
-
-
Receveur-Brechot, V.1
Bourhis, J.M.2
Uversky, V.N.3
Canard, B.4
Longhi, S.5
-
16
-
-
0026723063
-
Protein folding funnels: a kinetic approach to the sequence-structure relationship
-
Leopold P.E., Montal M., and Onuchic J.N. Protein folding funnels: a kinetic approach to the sequence-structure relationship. Proc. Natl. Acad. Sci. USA 89 (1992) 8721-8725
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 8721-8725
-
-
Leopold, P.E.1
Montal, M.2
Onuchic, J.N.3
-
21
-
-
0033056708
-
Folding funnels, binding funnels, and protein function
-
Tsai C.J., Kumar S., Ma B., and Nussinov R. Folding funnels, binding funnels, and protein function. Protein Sci. 8 (1999) 1181-1190
-
(1999)
Protein Sci.
, vol.8
, pp. 1181-1190
-
-
Tsai, C.J.1
Kumar, S.2
Ma, B.3
Nussinov, R.4
-
22
-
-
0033970020
-
Folding and binding cascades: dynamic landscapes and population shifts
-
Kumar S., Ma B., Tsai C.J., Sinha N., and Nussinov R. Folding and binding cascades: dynamic landscapes and population shifts. Protein Sci. 9 (2000) 10-19
-
(2000)
Protein Sci.
, vol.9
, pp. 10-19
-
-
Kumar, S.1
Ma, B.2
Tsai, C.J.3
Sinha, N.4
Nussinov, R.5
-
23
-
-
0035451185
-
Structured disorder and conformational selection
-
Tsai C.J., Ma B., Sham Y.Y., Kumar S., and Nussinov R. Structured disorder and conformational selection. Proteins 44 (2001) 418-427
-
(2001)
Proteins
, vol.44
, pp. 418-427
-
-
Tsai, C.J.1
Ma, B.2
Sham, Y.Y.3
Kumar, S.4
Nussinov, R.5
-
24
-
-
34248208651
-
p27Kip1 metabolism: a fascinating labyrinth
-
Borriello A., Cucciolla V., Oliva A., Zappia V., and Della Ragione F. p27Kip1 metabolism: a fascinating labyrinth. Cell Cycle 6 (2007) 1053-1061
-
(2007)
Cell Cycle
, vol.6
, pp. 1053-1061
-
-
Borriello, A.1
Cucciolla, V.2
Oliva, A.3
Zappia, V.4
Della Ragione, F.5
-
25
-
-
58949101630
-
Leucine-rich hydrophobic clusters promote folding of the N-terminus of the intrinsically disordered transactivation domain of p53
-
Espinoza-Fonseca L.M. Leucine-rich hydrophobic clusters promote folding of the N-terminus of the intrinsically disordered transactivation domain of p53. FEBS Lett. 583 (2009) 556-560
-
(2009)
FEBS Lett.
, vol.583
, pp. 556-560
-
-
Espinoza-Fonseca, L.M.1
-
26
-
-
41149177142
-
Modeling the accessible conformations of the intrinsically unstructured transactivation domain of p53
-
Lowry D.F., Stancik A., Shrestha R.M., and Daughdrill G.W. Modeling the accessible conformations of the intrinsically unstructured transactivation domain of p53. Proteins 71 (2008) 587-598
-
(2008)
Proteins
, vol.71
, pp. 587-598
-
-
Lowry, D.F.1
Stancik, A.2
Shrestha, R.M.3
Daughdrill, G.W.4
-
27
-
-
0037013263
-
Effect of phosphorylation on the structure and fold of transactivation domain of p53
-
Kar S., Sakaguchi K., Shimohigashi Y., Samaddar S., Banerjee R., Basu G., Swaminathan V., Kundu T.K., and Roy S. Effect of phosphorylation on the structure and fold of transactivation domain of p53. J. Biol. Chem. 277 (2002) 15579-15585
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 15579-15585
-
-
Kar, S.1
Sakaguchi, K.2
Shimohigashi, Y.3
Samaddar, S.4
Banerjee, R.5
Basu, G.6
Swaminathan, V.7
Kundu, T.K.8
Roy, S.9
-
28
-
-
33947254923
-
Binding of intrinsically disordered proteins is not necessarily accompanied by a structural transition to a folded form
-
Sigalov A.B., Zhuravleva A.V., and Orekhov V.Y. Binding of intrinsically disordered proteins is not necessarily accompanied by a structural transition to a folded form. Biochimie 89 (2007) 419-421
-
(2007)
Biochimie
, vol.89
, pp. 419-421
-
-
Sigalov, A.B.1
Zhuravleva, A.V.2
Orekhov, V.Y.3
-
29
-
-
37749053887
-
Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions
-
Tompa P., and Fuxreiter M. Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions. Trends Biochem. Sci. 33 (2008) 2-8
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 2-8
-
-
Tompa, P.1
Fuxreiter, M.2
-
30
-
-
33748456399
-
Analysis of molecular recognition features (MoRFs)
-
Mohan A., Oldfield C.J., Radivojac P., Vacic V., Cortese M.S., Dunker A.K., and Uversky V.N. Analysis of molecular recognition features (MoRFs). J. Mol. Biol. 362 (2006) 1043-1059
-
(2006)
J. Mol. Biol.
, vol.362
, pp. 1043-1059
-
-
Mohan, A.1
Oldfield, C.J.2
Radivojac, P.3
Vacic, V.4
Cortese, M.S.5
Dunker, A.K.6
Uversky, V.N.7
-
31
-
-
24944546549
-
Coupled folding and binding with alpha-helix-forming molecular recognition elements
-
Oldfield C.J., Cheng Y., Cortese M.S., Romero P., Uversky V.N., and Dunker A.K. Coupled folding and binding with alpha-helix-forming molecular recognition elements. Biochemistry 44 (2005) 12454-12470
-
(2005)
Biochemistry
, vol.44
, pp. 12454-12470
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Romero, P.4
Uversky, V.N.5
Dunker, A.K.6
-
32
-
-
14844361449
-
Primary contact sites in intrinsically unstructured proteins: the case of calpastatin and microtubule-associated protein 2
-
Csizmok V., Bokor M., Banki P., Klement E., Medzihradszky K.F., Friedrich P., Tompa K., and Tompa P. Primary contact sites in intrinsically unstructured proteins: the case of calpastatin and microtubule-associated protein 2. Biochemistry 44 (2005) 3955-3964
-
(2005)
Biochemistry
, vol.44
, pp. 3955-3964
-
-
Csizmok, V.1
Bokor, M.2
Banki, P.3
Klement, E.4
Medzihradszky, K.F.5
Friedrich, P.6
Tompa, K.7
Tompa, P.8
-
33
-
-
2142757231
-
Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
-
Fuxreiter M., Simon I., Friedrich P., and Tompa P. Preformed structural elements feature in partner recognition by intrinsically unstructured proteins. J. Mol. Biol. 338 (2004) 1015-1026
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 1015-1026
-
-
Fuxreiter, M.1
Simon, I.2
Friedrich, P.3
Tompa, P.4
-
34
-
-
34250821717
-
Mechanism of coupled folding and binding of an intrinsically disordered protein
-
Sugase K., Dyson H.J., and Wright P.E. Mechanism of coupled folding and binding of an intrinsically disordered protein. Nature 447 (2007) 1021-1025
-
(2007)
Nature
, vol.447
, pp. 1021-1025
-
-
Sugase, K.1
Dyson, H.J.2
Wright, P.E.3
-
36
-
-
0344936739
-
Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions
-
Radhakrishnan I., Perez-Alvarado G.C., Parker D., Dyson H.J., Montminy M.R., and Wright P.E. Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions. Cell 91 (1997) 741-752
-
(1997)
Cell
, vol.91
, pp. 741-752
-
-
Radhakrishnan, I.1
Perez-Alvarado, G.C.2
Parker, D.3
Dyson, H.J.4
Montminy, M.R.5
Wright, P.E.6
-
37
-
-
1842298212
-
From Levinthal to pathways to funnels
-
Dill K.A., and Chan H.S. From Levinthal to pathways to funnels. Nat. Struct. Biol. 4 (1997) 10-19
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 10-19
-
-
Dill, K.A.1
Chan, H.S.2
-
38
-
-
0032568599
-
Folding funnels and frustration in off-lattice minimalist protein landscapes
-
Nymeyer H., Garcia A.E., and Onuchic J.N. Folding funnels and frustration in off-lattice minimalist protein landscapes. Proc. Natl. Acad. Sci. USA 95 (1998) 5921-5928
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 5921-5928
-
-
Nymeyer, H.1
Garcia, A.E.2
Onuchic, J.N.3
-
39
-
-
0035022941
-
Intrinsically disordered protein
-
Dunker A.K., Lawson J.D., Brown C.J., Williams R.M., Romero P., Oh J.S., Oldfield C.J., Campen A.M., Ratliff C.M., Hipps K.W., Ausio J., Nissen M.S., Reeves R., Kang C., Kissinger C.R., Bailey R.W., Griswold M.D., Chiu W., Garner E.C., and Obradovic Z. Intrinsically disordered protein. J. Mol. Graph. Model. 19 (2001) 26-59
-
(2001)
J. Mol. Graph. Model.
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
Ausio, J.11
Nissen, M.S.12
Reeves, R.13
Kang, C.14
Kissinger, C.R.15
Bailey, R.W.16
Griswold, M.D.17
Chiu, W.18
Garner, E.C.19
Obradovic, Z.20
more..
-
40
-
-
0034255123
-
Speeding molecular recognition by using the folding funnel: the fly-casting mechanism
-
Shoemaker B.A., Portman J.J., and Wolynes P.G. Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. Proc. Natl. Acad. Sci. USA 97 (2000) 8868-8873
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8868-8873
-
-
Shoemaker, B.A.1
Portman, J.J.2
Wolynes, P.G.3
-
41
-
-
33746268421
-
Phosphorylation-induced transient intrinsic structure in the kinase-inducible domain of CREB facilitates its recognition by the KIX domain of CBP
-
Solt I., Magyar C., Simon I., Tompa P., and Fuxreiter M. Phosphorylation-induced transient intrinsic structure in the kinase-inducible domain of CREB facilitates its recognition by the KIX domain of CBP. Proteins 64 (2006) 749-757
-
(2006)
Proteins
, vol.64
, pp. 749-757
-
-
Solt, I.1
Magyar, C.2
Simon, I.3
Tompa, P.4
Fuxreiter, M.5
-
42
-
-
1642384392
-
Folding for binding or binding for folding?
-
Caflisch A. Folding for binding or binding for folding?. Trends Biotechnol. 21 (2003) 423-425
-
(2003)
Trends Biotechnol.
, vol.21
, pp. 423-425
-
-
Caflisch, A.1
-
43
-
-
47349126421
-
Mechanism of induced folding: both folding before binding and binding before folding can be realized in staphylococcal nuclease mutants
-
Onitsuka M., Kamikubo H., Yamazaki Y., and Kataoka M. Mechanism of induced folding: both folding before binding and binding before folding can be realized in staphylococcal nuclease mutants. Proteins 72 (2008) 837-847
-
(2008)
Proteins
, vol.72
, pp. 837-847
-
-
Onitsuka, M.1
Kamikubo, H.2
Yamazaki, Y.3
Kataoka, M.4
|