-
1
-
-
0024448182
-
Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy
-
Alam, K. Y., and D. P. Clark. 1989. Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy. J. Bacterid. 171:6213-6217.
-
(1989)
J. Bacterid
, vol.171
, pp. 6213-6217
-
-
Alam, K.Y.1
Clark, D.P.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0141925902
-
Transcription regulation by tandem-bound FNR at Escherichia coli promoters
-
Barnard, A. M. L., J. Green, and S. J. W. Busby. 2003. Transcription regulation by tandem-bound FNR at Escherichia coli promoters. J. Bacteriol. 185:5993-6004.
-
(2003)
J. Bacteriol
, vol.185
, pp. 5993-6004
-
-
Barnard, A.M.L.1
Green, J.2
Busby, S.J.W.3
-
4
-
-
0036331039
-
Microarray transcription profiling of a Shewanella oneidensis etrA mutant
-
Beliaev, A. S., D. K. Thompson, M. W. Fields, L. Wu, D. P. Lies, K. H. Nealson, and J. Zhou. 2002. Microarray transcription profiling of a Shewanella oneidensis etrA mutant. J. Bacteriol. 184:4612-4616.
-
(2002)
J. Bacteriol
, vol.184
, pp. 4612-4616
-
-
Beliaev, A.S.1
Thompson, D.K.2
Fields, M.W.3
Wu, L.4
Lies, D.P.5
Nealson, K.H.6
Zhou, J.7
-
5
-
-
0024362580
-
Cloning of binding sequences for the Escherichia coli transcription activators, FNR and CRP: Location of bases involved in discrimination between FNR and CRP
-
Bell, A. I., K. L. Gaston, J. A. Cole, and S. J. Busby. 1989. Cloning of binding sequences for the Escherichia coli transcription activators, FNR and CRP: location of bases involved in discrimination between FNR and CRP. Nucleic Acids Res. 17:3865-3874.
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 3865-3874
-
-
Bell, A.I.1
Gaston, K.L.2
Cole, J.A.3
Busby, S.J.4
-
6
-
-
0022908612
-
Comparison of the malA regions of Escherichia coli and Klebsiella pneumoniae
-
Bloch, M. A., and O. Raibaud. 1986. Comparison of the malA regions of Escherichia coli and Klebsiella pneumoniae. J. Bacteriol. 168:1220-1227.
-
(1986)
J. Bacteriol
, vol.168
, pp. 1220-1227
-
-
Bloch, M.A.1
Raibaud, O.2
-
7
-
-
0014980473
-
Catabolite repression of tryptophanase in Escherichia coli
-
Botsford, J. L., and R. D. DeMoss. 1971. Catabolite repression of tryptophanase in Escherichia coli. J. Bacteriol. 105:303-312.
-
(1971)
J. Bacteriol
, vol.105
, pp. 303-312
-
-
Botsford, J.L.1
DeMoss, R.D.2
-
8
-
-
0033983166
-
Towards single-copy gene expression systems making gene cloning physiologically relevant: Lambda InCh. a simple Escherichia coli plasmid-chromosome shuttle system
-
Boyd, D., D. S. Weiss, J. C. Chen, and J. Beckwith. 2000. Towards single-copy gene expression systems making gene cloning physiologically relevant: lambda InCh. a simple Escherichia coli plasmid-chromosome shuttle system. J. Bacteriol. 182:842-847.
-
(2000)
J. Bacteriol
, vol.182
, pp. 842-847
-
-
Boyd, D.1
Weiss, D.S.2
Chen, J.C.3
Beckwith, J.4
-
9
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
10
-
-
34948885665
-
Effects of Fis on Escherichia coli gene expression during different growth stages
-
Bradley, M. D., M. B. Beach, A. P. de Koning, T. S. Pratt, and R. Osuna. 2007. Effects of Fis on Escherichia coli gene expression during different growth stages. Microbiology 153:2922-2940.
-
(2007)
Microbiology
, vol.153
, pp. 2922-2940
-
-
Bradley, M.D.1
Beach, M.B.2
de Koning, A.P.3
Pratt, T.S.4
Osuna, R.5
-
11
-
-
0015842608
-
-
Brickman, E., L. Soil, and J. Beckwith. 1973. Genetic characterization of mutations which affect catabolite-sensitive operons in Escherichia coli. including deletions of the gene for adenyl cyclase. J. Bacteriol. 116:582-587.
-
Brickman, E., L. Soil, and J. Beckwith. 1973. Genetic characterization of mutations which affect catabolite-sensitive operons in Escherichia coli. including deletions of the gene for adenyl cyclase. J. Bacteriol. 116:582-587.
-
-
-
-
12
-
-
1842833398
-
NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: Location, topology and physiological roles in quinol oxidation and redox balancing
-
Brondijk, T. H., A. Nilavongse, N. Filenko, D. J. Richardson, and J, A. Cole. 2004. NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing. Biochem. J. 379:47-55.
-
(2004)
Biochem. J
, vol.379
, pp. 47-55
-
-
Brondijk, T.H.1
Nilavongse, A.2
Filenko, N.3
Richardson, D.J.4
Cole, J.A.5
-
13
-
-
1442306129
-
Evolutionary comparisons suggest many novel cAMP response protein binding sites in Escherichia coli
-
Brown, C. T., and C. G. Callan, Jr. 2004. Evolutionary comparisons suggest many novel cAMP response protein binding sites in Escherichia coli. Proc. Natl. Acad. Sci. USA 101:2404-2409.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 2404-2409
-
-
Brown, C.T.1
Callan Jr, C.G.2
-
14
-
-
22144488494
-
Integration of three signals at the Escherichia coli nrf promoter: A role for Fis protein in catabolite repression
-
Browning, D. F., D. C. Grainger, C. M. Beatty, A. J. Wolfe, J. A. Cole, and S. J. Busby. 2005. Integration of three signals at the Escherichia coli nrf promoter: a role for Fis protein in catabolite repression. Mol. Microbiol. 57:496-510.
-
(2005)
Mol. Microbiol
, vol.57
, pp. 496-510
-
-
Browning, D.F.1
Grainger, D.C.2
Beatty, C.M.3
Wolfe, A.J.4
Cole, J.A.5
Busby, S.J.6
-
15
-
-
0032698634
-
Transcription activation by catabolite activator protein (CAP)
-
Busby, S,, and R. H. Ebright. 1999. Transcription activation by catabolite activator protein (CAP). J. Mol. Biol. 293:199-213.
-
(1999)
J. Mol. Biol
, vol.293
, pp. 199-213
-
-
Busby, S.1
Ebright, R.H.2
-
16
-
-
0028094718
-
Transcription activation by the Escherichia coli cyclic AMP receptor protein. Receptors bound in tandem at promoters can interact synergistically
-
Busby, S., D. West, M. Lawes, C. Webster, A. Ishihama, and A. Kolb. 1994. Transcription activation by the Escherichia coli cyclic AMP receptor protein. Receptors bound in tandem at promoters can interact synergistically. J. Mol. Biol. 241:341-352.
-
(1994)
J. Mol. Biol
, vol.241
, pp. 341-352
-
-
Busby, S.1
West, D.2
Lawes, M.3
Webster, C.4
Ishihama, A.5
Kolb, A.6
-
17
-
-
0021930920
-
Nucleotide sequence of Klebsiella pneumoniae lac genes
-
Buvinger, W. E., and M. Riley. 1985. Nucleotide sequence of Klebsiella pneumoniae lac genes. J. Bacteriol. 163:850-857.
-
(1985)
J. Bacteriol
, vol.163
, pp. 850-857
-
-
Buvinger, W.E.1
Riley, M.2
-
18
-
-
0026056114
-
Anaerobically expressed Escherichia coli genes identified by operon fusion techniques
-
Choe, M., and W. S. Reznikoff. 1991. Anaerobically expressed Escherichia coli genes identified by operon fusion techniques. J. Bacteriol. 173:6139-6146.
-
(1991)
J. Bacteriol
, vol.173
, pp. 6139-6146
-
-
Choe, M.1
Reznikoff, W.S.2
-
19
-
-
0027465165
-
Identification of the regulatory sequence of anaerobically expressed locus aeg-46.5
-
Choe, M., and W. S. Reznikoff. 1993. Identification of the regulatory sequence of anaerobically expressed locus aeg-46.5. J. Bacteriol. 175:1165-1172.
-
(1993)
J. Bacteriol
, vol.175
, pp. 1165-1172
-
-
Choe, M.1
Reznikoff, W.S.2
-
20
-
-
0024723183
-
The fermentation pathways of Escherichia coli
-
Clark, D. P. 1989. The fermentation pathways of Escherichia coli. FEMS Microbiol. Rev. 5:223-234.
-
(1989)
FEMS Microbiol. Rev
, vol.5
, pp. 223-234
-
-
Clark, D.P.1
-
21
-
-
0000103024
-
Physiology of the inhibition by glucose of the induced synthesis of the β-galactoside enzyme system of Escherichia coli
-
Cohn, M., and K. Horibata. 1959. Physiology of the inhibition by glucose of the induced synthesis of the β-galactoside enzyme system of Escherichia coli. J. Bacteriol. 78:624-635.
-
(1959)
J. Bacteriol
, vol.78
, pp. 624-635
-
-
Cohn, M.1
Horibata, K.2
-
22
-
-
0029086289
-
Nitrate and nitrite regulation of the Fnr-dependent aeg-46.5 promoter of Escherichia coli K-12 is mediated by competition between homologous response regulators (NarL and NarP) for a common DNA-binding site
-
Darwin, A. J., and Y. Stewart. 1995. Nitrate and nitrite regulation of the Fnr-dependent aeg-46.5 promoter of Escherichia coli K-12 is mediated by competition between homologous response regulators (NarL and NarP) for a common DNA-binding site. J. Mol. Biol. 251:15-29.
-
(1995)
J. Mol. Biol
, vol.251
, pp. 15-29
-
-
Darwin, A.J.1
Stewart, Y.2
-
23
-
-
0031856846
-
Fnr, NarP, and NarL regulation of Escherichia coli K-12 napF (periplasmic nitrate reductase) operon transcription in vitro
-
Darwin, A. J., E. C. Ziegelhoffer, P. J. Kiley, and V. Stewart 1998. Fnr, NarP, and NarL regulation of Escherichia coli K-12 napF (periplasmic nitrate reductase) operon transcription in vitro. J. Bacteriol. 180:4192-4198.
-
(1998)
J. Bacteriol
, vol.180
, pp. 4192-4198
-
-
Darwin, A.J.1
Ziegelhoffer, E.C.2
Kiley, P.J.3
Stewart, V.4
-
24
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K. A., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Nad. Acad. Sci. USA 97:6640-6645.
-
(2000)
Proc. Nad. Acad. Sci. USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
25
-
-
33845626641
-
How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria
-
Deutscher, J., C. Francke, and P. W. Postma. 2006. How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria. Microbiol. Mol. Biol. Rev. 70:939-1031.
-
(2006)
Microbiol. Mol. Biol. Rev
, vol.70
, pp. 939-1031
-
-
Deutscher, J.1
Francke, C.2
Postma, P.W.3
-
26
-
-
4243449857
-
The influence of nitrate and nitrite reduction on catabolite repression in Escherichia coli
-
Dobrogosz, W. J. 1965. The influence of nitrate and nitrite reduction on catabolite repression in Escherichia coli. Biochim. Biophys. Acta 100:553-566.
-
(1965)
Biochim. Biophys. Acta
, vol.100
, pp. 553-566
-
-
Dobrogosz, W.J.1
-
27
-
-
34250316617
-
The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic. respiratory nitrite reductase
-
Filenko, N., S. Spiro, D. F. Browning, D. Squire, T. W. Overton, J. Cole, and C. Constantinidou. 2007. The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic. respiratory nitrite reductase. J. Bacteriol. 189:4410-4417.
-
(2007)
J. Bacteriol
, vol.189
, pp. 4410-4417
-
-
Filenko, N.1
Spiro, S.2
Browning, D.F.3
Squire, D.4
Overton, T.W.5
Cole, J.6
Constantinidou, C.7
-
28
-
-
64149086284
-
-
Gennis, R. B., and V. Stewart. 1996. Respiration, p. 217-261. In F. C. Neidhardt, R. Curtiss III, J. L. lngraham, E. C. C. Lin, K. B. Low, B. Magasanik. W. S. Reznikoff, M. Riley. M. Schaechter. and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., 1. ASM Press, Washington, DC.
-
Gennis, R. B., and V. Stewart. 1996. Respiration, p. 217-261. In F. C. Neidhardt, R. Curtiss III, J. L. lngraham, E. C. C. Lin, K. B. Low, B. Magasanik. W. S. Reznikoff, M. Riley. M. Schaechter. and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., vol. 1. ASM Press, Washington, DC.
-
-
-
-
30
-
-
0024726862
-
Molecular characterization of two cya mutations, cya-854 and cyaR1
-
Glaser, P., A. Roy, and A. Danchin. 1989. Molecular characterization of two cya mutations, cya-854 and cyaR1. J. Bacteriol. 171:5176-5178.
-
(1989)
J. Bacteriol
, vol.171
, pp. 5176-5178
-
-
Glaser, P.1
Roy, A.2
Danchin, A.3
-
31
-
-
0026651748
-
DNA sequence determinants for binding of the Escherichia coli catabolite gene activator protein
-
Gunasekera, A., Y. W. Ebright, and R H. Ebright. 1992. DNA sequence determinants for binding of the Escherichia coli catabolite gene activator protein. J. Biol. Chem. 267:14713-14720.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 14713-14720
-
-
Gunasekera, A.1
Ebright, Y.W.2
Ebright, R.H.3
-
32
-
-
0030905517
-
Catabolite repression by glucose 6-phosphate, gluconate and lactose in Escherichia coli
-
Hogema, B. M., J. C. Arents, T. Inada, H. Aiba, K. van Dam, and P. W. Postma. 1997. Catabolite repression by glucose 6-phosphate, gluconate and lactose in Escherichia coli. Mol. Microbiol. 24:857-867.
-
(1997)
Mol. Microbiol
, vol.24
, pp. 857-867
-
-
Hogema, B.M.1
Arents, J.C.2
Inada, T.3
Aiba, H.4
van Dam, K.5
Postma, P.W.6
-
33
-
-
0034460874
-
Interdependence of activation at rhaSR by cyclic AMP receptor protein, the RNA polymerase alpha subunit C-terminal domain, and RhaR
-
Holcroft, C. C., and S. M. Egan. 2000. Interdependence of activation at rhaSR by cyclic AMP receptor protein, the RNA polymerase alpha subunit C-terminal domain, and RhaR. J. Bacteriol. 182:6774-6782.
-
(2000)
J. Bacteriol
, vol.182
, pp. 6774-6782
-
-
Holcroft, C.C.1
Egan, S.M.2
-
34
-
-
0027183315
-
Co-dependent positive regulation of the ansB promoter of Escherichia coli by CRP and the FNR protein: A molecular analysis
-
Jennings, M. P., and I. R. Beacham. 1993. Co-dependent positive regulation of the ansB promoter of Escherichia coli by CRP and the FNR protein: a molecular analysis. Mol. Microbiol. 9:155-164.
-
(1993)
Mol. Microbiol
, vol.9
, pp. 155-164
-
-
Jennings, M.P.1
Beacham, I.R.2
-
35
-
-
0027476456
-
Synergistic activation of transcription by Escherichia coli cAMP receptor protein
-
Joung, J. K., L. U. Le, and A. Hochschild. 1993. Synergistic activation of transcription by Escherichia coli cAMP receptor protein. Proc. Natl. Acad. Sci. USA 90:3083-3087.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3083-3087
-
-
Joung, J.K.1
Le, L.U.2
Hochschild, A.3
-
36
-
-
0032457906
-
Oxygen sensing by the global regulator, FNR: The role of the iron-sulfur cluster
-
Kiley, P. J., and H. Beinert. 1998. Oxygen sensing by the global regulator, FNR: the role of the iron-sulfur cluster. FEMS Microbiol. Rev. 22:341-352.
-
(1998)
FEMS Microbiol. Rev
, vol.22
, pp. 341-352
-
-
Kiley, P.J.1
Beinert, H.2
-
37
-
-
0033639260
-
FNR-dependent activation of the class 11 dmsA and narG promoters of Escherichia coli requires FNR-activating regions 1 and 3
-
Lamberg, K. E., and P. J. Kiley, 2000. FNR-dependent activation of the class 11 dmsA and narG promoters of Escherichia coli requires FNR-activating regions 1 and 3. Mol. Microbiol. 38:817-827.
-
(2000)
Mol. Microbiol
, vol.38
, pp. 817-827
-
-
Lamberg, K.E.1
Kiley, P.J.2
-
38
-
-
1342345189
-
Catabolite activator protein: DNA binding and transcription activation
-
Lawson, C. L., D. Swigon, K. S. Murakami, S. A. Darst, H. M. Berman, and R. H. Ebright. 2004. Catabolite activator protein: DNA binding and transcription activation. Curr. Opin. Struct. Biol. 14:10-20.
-
(2004)
Curr. Opin. Struct. Biol
, vol.14
, pp. 10-20
-
-
Lawson, C.L.1
Swigon, D.2
Murakami, K.S.3
Darst, S.A.4
Berman, H.M.5
Ebright, R.H.6
-
39
-
-
35649003869
-
Activation of yeaR-yoaG operon transcription by the nitrate-responsive regulator NarL is independent of oxygen-responsive regulator Fnr in Escherichia coli K-12
-
Lin, H.-Y., P. J. Bledsoe, and V. Stewart. 2007. Activation of yeaR-yoaG operon transcription by the nitrate-responsive regulator NarL is independent of oxygen-responsive regulator Fnr in Escherichia coli K-12. J. Bacteriol. 189:7539-7548.
-
(2007)
J. Bacteriol
, vol.189
, pp. 7539-7548
-
-
Lin, H.-Y.1
Bledsoe, P.J.2
Stewart, V.3
-
40
-
-
0016266232
-
Purification and properties of nitrate reductase from Escherichia coli K12
-
MacGregor, C. H., C. A. Schnaitman, and D. E. Normansell. 1974. Purification and properties of nitrate reductase from Escherichia coli K12. J. Biol. Chem. 249:5321-5327.
-
(1974)
J. Biol. Chem
, vol.249
, pp. 5321-5327
-
-
MacGregor, C.H.1
Schnaitman, C.A.2
Normansell, D.E.3
-
41
-
-
0034900650
-
Isolation and characterization of a Shewanella putrefaciens MR-1 electron transport regulator etrA mutant: Reassessment of the role of EtrA
-
Maier, T. M., and C. R. Myers. 2001. Isolation and characterization of a Shewanella putrefaciens MR-1 electron transport regulator etrA mutant: reassessment of the role of EtrA. J. Bacteriol. 183:4918-4926.
-
(2001)
J. Bacteriol
, vol.183
, pp. 4918-4926
-
-
Maier, T.M.1
Myers, C.R.2
-
43
-
-
0036267328
-
The molybdate-responsive Escherichia coli ModE transcriptional regulator coordinates periplasmic nitrate reductase (napFDAGHBC) operon expression with nitrate and molyb-date availability
-
McNicholas, P. M., and R. P. Gunsalus. 2002. The molybdate-responsive Escherichia coli ModE transcriptional regulator coordinates periplasmic nitrate reductase (napFDAGHBC) operon expression with nitrate and molyb-date availability. J. Bacteriol. 184:3253-3259.
-
(2002)
J. Bacteriol
, vol.184
, pp. 3253-3259
-
-
McNicholas, P.M.1
Gunsalus, R.P.2
-
44
-
-
0028946510
-
Transcription activation at the Escherichia coli uhpT promoter by the catabolite gene activator protein
-
Merkel, T. J., J. L, Dahl, R. H. Ebright, and R. J. Kadner. 1995. Transcription activation at the Escherichia coli uhpT promoter by the catabolite gene activator protein. J. Bacteriol. 177:1712-1718.
-
(1995)
J. Bacteriol
, vol.177
, pp. 1712-1718
-
-
Merkel, T.J.J.L.1
Dahl2
Ebright, R.H.3
Kadner, R.J.4
-
46
-
-
0031850575
-
Definition and distinction between assimilatory, dissimilatory and respiratory pathways
-
Moreno-Vivian, C., and S. J. Ferguson. 1998. Definition and distinction between assimilatory, dissimilatory and respiratory pathways. Mol. Microbiol. 29:664-666.
-
(1998)
Mol. Microbiol
, vol.29
, pp. 664-666
-
-
Moreno-Vivian, C.1
Ferguson, S.J.2
-
48
-
-
0032464663
-
What's for dinner? Entner-Doudoroff metabolism in Escherichia coli
-
Peekhaus, N., and T. Conway. 1998. What's for dinner? Entner-Doudoroff metabolism in Escherichia coli. J. Bacteriol. 180:3495-3502.
-
(1998)
J. Bacteriol
, vol.180
, pp. 3495-3502
-
-
Peekhaus, N.1
Conway, T.2
-
49
-
-
0021858740
-
Phosphoenolpyruvate: Carbohydrate phosphotransferase system of bacteria
-
Postma, P. W., and J. W. Lengeler. 1985. Phosphoenolpyruvate: carbohydrate phosphotransferase system of bacteria. Microbiol. Rev. 49:232-269.
-
(1985)
Microbiol. Rev
, vol.49
, pp. 232-269
-
-
Postma, P.W.1
Lengeler, J.W.2
-
50
-
-
0034974210
-
Nitrate reduction in the periplasm of gram-negative bacteria
-
Potter, L., H. Angove, D. J. Richardson, and J. Cole. 2001. Nitrate reduction in the periplasm of gram-negative bacteria. Adv. Microb. Physiol. 45:51-112.
-
(2001)
Adv. Microb. Physiol
, vol.45
, pp. 51-112
-
-
Potter, L.1
Angove, H.2
Richardson, D.J.3
Cole, J.4
-
51
-
-
0033571051
-
-
Potter, L, C., P. Millington, L. Griffiths, G. H. Thomas, and J. A. Cole. 1999. Competition between Escherichia coli strains expressing either a periplasmic or a membrane-bound nitrate reductase: does Nap confer a selective advantage during nitrate-limited growth? Biochem. J. 344:77-84.
-
Potter, L, C., P. Millington, L. Griffiths, G. H. Thomas, and J. A. Cole. 1999. Competition between Escherichia coli strains expressing either a periplasmic or a membrane-bound nitrate reductase: does Nap confer a selective advantage during nitrate-limited growth? Biochem. J. 344:77-84.
-
-
-
-
52
-
-
0026726772
-
In vivo requirement of integration host factor for nitrate reductase (nar) operon expression in Escherichia coli K-12
-
Rabin, R. S., L. A. Collins, and V. Stewart. 1992. In vivo requirement of integration host factor for nitrate reductase (nar) operon expression in Escherichia coli K-12. Proc. Natl. Acad. Sci. USA 89:8701-8705.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 8701-8705
-
-
Rabin, R.S.1
Collins, L.A.2
Stewart, V.3
-
53
-
-
33847670273
-
Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enrerobacreriaceae, Pasteurellaceae, Vibrionaceae)
-
Ravcheev, D. A., A. V. Gerasimova, A. A. Mironov, and M. S. Gelfand. 2007. Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enrerobacreriaceae, Pasteurellaceae, Vibrionaceae). BMC Genomics 8:54.
-
(2007)
BMC Genomics
, vol.8
, pp. 54
-
-
Ravcheev, D.A.1
Gerasimova, A.V.2
Mironov, A.A.3
Gelfand, M.S.4
-
54
-
-
0026508528
-
The influence of carbon substrate on the activity of the periplasmic nitrate reductase in aerobically grown Thiosphaera pantotropha
-
Richardson, D. J., and S. J. Ferguson. 1992. The influence of carbon substrate on the activity of the periplasmic nitrate reductase in aerobically grown Thiosphaera pantotropha. Arch. Microbiol. 157:535-537.
-
(1992)
Arch. Microbiol
, vol.157
, pp. 535-537
-
-
Richardson, D.J.1
Ferguson, S.J.2
-
55
-
-
0016613443
-
Deletion of the Escherichia coli crp gene
-
Sabourin, D., and J. Beckwith. 1975. Deletion of the Escherichia coli crp gene. J. Bacteriol. 122:338-340.
-
(1975)
J. Bacteriol
, vol.122
, pp. 338-340
-
-
Sabourin, D.1
Beckwith, J.2
-
56
-
-
0037608789
-
Involvement of cyclic AMP (cAMP) and cAMP receptor protein in anaerobic respiration of Shewanella oneidensis
-
Saffarini, D. A., R. Schultz, and A. Beliaev. 2003. Involvement of cyclic AMP (cAMP) and cAMP receptor protein in anaerobic respiration of Shewanella oneidensis. J. Bacteriol. 185:3668-3671.
-
(2003)
J. Bacteriol
, vol.185
, pp. 3668-3671
-
-
Saffarini, D.A.1
Schultz, R.2
Beliaev, A.3
-
57
-
-
0029941168
-
The catabolite repressor/ activator (Cra) protein of enteric bacteria
-
Saier, M. H., Jr., and T. M. Ramseier. 1996. The catabolite repressor/ activator (Cra) protein of enteric bacteria. J. Bacteriol. 178:3411-3417.
-
(1996)
J. Bacteriol
, vol.178
, pp. 3411-3417
-
-
Saier Jr., M.H.1
Ramseier, T.M.2
-
58
-
-
0027452546
-
Activation of the Escherichia coli nitrate reductase (narGHJI) operon by NarL and Fnr requires integration host factor
-
Schroder, L, S. Darie, and R. P. Gunsalus. 1993. Activation of the Escherichia coli nitrate reductase (narGHJI) operon by NarL and Fnr requires integration host factor. J. Biol. Chem. 268:771-774.
-
(1993)
J. Biol. Chem
, vol.268
, pp. 771-774
-
-
Schroder, L.1
Darie, S.2
Gunsalus, R.P.3
-
59
-
-
0029609262
-
Transcriptional co-activation at the ansB promoters: Involvement of the activating regions of CRP and FNR when bound in tandem
-
Scott, S., S. Busby, and I. Beacham. 1995. Transcriptional co-activation at the ansB promoters: involvement of the activating regions of CRP and FNR when bound in tandem. Mol. Microbiol. 18:521-531.
-
(1995)
Mol. Microbiol
, vol.18
, pp. 521-531
-
-
Scott, S.1
Busby, S.2
Beacham, I.3
-
60
-
-
0033709553
-
Control of periplasmic nitrate reductase gene expression (napEDABC) from Paracoccus pantotrophus in response to oxygen and carbon substrates
-
Sears, H. J., G. Sawers, B. C. Berks, S. J. Ferguson, and D. J. Richardson. 2000. Control of periplasmic nitrate reductase gene expression (napEDABC) from Paracoccus pantotrophus in response to oxygen and carbon substrates. Microbiology 146:2977-2985.
-
(2000)
Microbiology
, vol.146
, pp. 2977-2985
-
-
Sears, H.J.1
Sawers, G.2
Berks, B.C.3
Ferguson, S.J.4
Richardson, D.J.5
-
61
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R. W., F. Houman, and N. Kleckner. 1987. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53:85-96
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
62
-
-
0020377789
-
Requirement of Fnr and NarL functions for nitrate reductase expression in Escherichia coli K-12
-
Stewart, V. 1982. Requirement of Fnr and NarL functions for nitrate reductase expression in Escherichia coli K-12. J. Bacteriol. 151:1320-1325.
-
(1982)
J. Bacteriol
, vol.151
, pp. 1320-1325
-
-
Stewart, V.1
-
63
-
-
0037326468
-
Biochemical Society Special Lecture. Nitrate- and nitriteresponsive sensors NarX and NarQ of proteobacteria
-
Stewart, V. 2003. Biochemical Society Special Lecture. Nitrate- and nitriteresponsive sensors NarX and NarQ of proteobacteria. Biochem. Soc. Trans. 31:1-10.
-
(2003)
Biochem. Soc. Trans
, vol.31
, pp. 1-10
-
-
Stewart, V.1
-
64
-
-
0037377805
-
Synthetic lac operator substitutions for studying the nitrate- and nitrite-responsive NarX-NarL and NarQ-NarP two-component regulatory systems of Escherichia coli K-12
-
Stewart, V., and P. J. Bledsoe. 2003. Synthetic lac operator substitutions for studying the nitrate- and nitrite-responsive NarX-NarL and NarQ-NarP two-component regulatory systems of Escherichia coli K-12. J. Bacteriol. 185: 2104-2111.
-
(2003)
J. Bacteriol
, vol.185
, pp. 2104-2111
-
-
Stewart, V.1
Bledsoe, P.J.2
-
65
-
-
26444433328
-
Fnr-, NarP-. and NarL-dependent regulation of transcription initiation from the Haemophilus influenzae Rd napF (periplasmic nitrate reductase) promoter in Escherichia coli K-12
-
Stewart, V., and P. J. Bledsoe. 2005. Fnr-, NarP-. and NarL-dependent regulation of transcription initiation from the Haemophilus influenzae Rd napF (periplasmic nitrate reductase) promoter in Escherichia coli K-12. J. Bacteriol. 187:6928-6935.
-
(2005)
J. Bacteriol
, vol.187
, pp. 6928-6935
-
-
Stewart, V.1
Bledsoe, P.J.2
-
66
-
-
0141727575
-
Dual overlapping promoters control napF (periplasmic nitrate reductase) operon expression in Escherichia coli K-12
-
Stewart, V., P. J. Bledsoe, and S. B. Williams. 2003. Dual overlapping promoters control napF (periplasmic nitrate reductase) operon expression in Escherichia coli K-12. J. Bacteriol. 185:5862-5870.
-
(2003)
J. Bacteriol
, vol.185
, pp. 5862-5870
-
-
Stewart, V.1
Bledsoe, P.J.2
Williams, S.B.3
-
67
-
-
0036182372
-
Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12
-
Stewart, V., Y. Lu, and A. J. Darwin. 2002. Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12. J. Bacteriol. 184:1314-1323.
-
(2002)
J. Bacteriol
, vol.184
, pp. 1314-1323
-
-
Stewart, V.1
Lu, Y.2
Darwin, A.J.3
-
68
-
-
0023991777
-
-
Stewart, V., and J. Parales, Jr. 1988. Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12. J. Bacteriol. 170:1589-1597.
-
Stewart, V., and J. Parales, Jr. 1988. Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12. J. Bacteriol. 170:1589-1597.
-
-
-
-
69
-
-
0001943573
-
Dual sensors and dual response regulators interact to control nitrate- and nitrite-responsive gene expression in Escherichia coli
-
J. A. Hoch and T. J. Silhavy ed, ASM Press, Washington, DC
-
Stewart, V., and R. S. Rabin. 1995. Dual sensors and dual response regulators interact to control nitrate- and nitrite-responsive gene expression in Escherichia coli, p. 233-252. In J. A. Hoch and T. J. Silhavy (ed.). Two-component signal transduction. ASM Press, Washington, DC.
-
(1995)
Two-component signal transduction
, pp. 233-252
-
-
Stewart, V.1
Rabin, R.S.2
-
70
-
-
0023821768
-
Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phvlogenetic footprints
-
Tagle, D. A., B. F. Koop, M. Goodman, J. L. Slightom, D. L. Hess, and R. T. Jones. 1988. Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phvlogenetic footprints. J. Mol. Biol. 203:439-455.
-
(1988)
J. Mol. Biol
, vol.203
, pp. 439-455
-
-
Tagle, D.A.1
Koop, B.F.2
Goodman, M.3
Slightom, J.L.4
Hess, D.L.5
Jones, R.T.6
-
71
-
-
0037161194
-
Architectural requirements for optimal activation by tandem CRP molecules at a class I CRP-dependent promoter
-
Tebbutt, J., V. A. Rhodius, C. L. Webster, and S. J. W. Busby. 2002. Architectural requirements for optimal activation by tandem CRP molecules at a class I CRP-dependent promoter. FEMS Microbiol. Lett. 210:55-60.
-
(2002)
FEMS Microbiol. Lett
, vol.210
, pp. 55-60
-
-
Tebbutt, J.1
Rhodius, V.A.2
Webster, C.L.3
Busby, S.J.W.4
-
72
-
-
0030821732
-
Catabolite regulation of two Escherichia coli operons encoding nitrite reductases: Role of the Cra protein
-
Tyson, K., S. Busby, and J. Cole. 1997. Catabolite regulation of two Escherichia coli operons encoding nitrite reductases: role of the Cra protein. Arch. Microbiol. 168:240-244.
-
(1997)
Arch. Microbiol
, vol.168
, pp. 240-244
-
-
Tyson, K.1
Busby, S.2
Cole, J.3
-
73
-
-
0028113993
-
Nitrite and nitrate regulation at the promoters of two Escherichia coli Operons encoding nitrite reductase: Identification of common target heptamers for both NarP- and NarL-depen-dent regulation
-
Tyson, K. L., J. A. Cole, and S. J. Busby. 1994. Nitrite and nitrate regulation at the promoters of two Escherichia coli Operons encoding nitrite reductase: identification of common target heptamers for both NarP- and NarL-depen-dent regulation. Mol. Microbiol. 13:1045-1055.
-
(1994)
Mol. Microbiol
, vol.13
, pp. 1045-1055
-
-
Tyson, K.L.1
Cole, J.A.2
Busby, S.J.3
-
74
-
-
0030738589
-
Alternative respiratory pathways of Escherichia coli; energetics and transcriptional regulation in response to electron acceptors
-
Unden, G., and J. Bongaerts. 1997. Alternative respiratory pathways of Escherichia coli; energetics and transcriptional regulation in response to electron acceptors. Biochim. Biophys. Acta 1320:217-234.
-
(1997)
Biochim. Biophys. Acta
, vol.1320
, pp. 217-234
-
-
Unden, G.1
Bongaerts, J.2
-
75
-
-
0026027131
-
Promoter sequence requirements for Fnr-dependent activation of transcription of the narGHJI operon
-
Walker, M. S., and J. A. DeMoss. 1991. Promoter sequence requirements for Fnr-dependent activation of transcription of the narGHJI operon. Mol. Microbiol. 5:353-360.
-
(1991)
Mol. Microbiol
, vol.5
, pp. 353-360
-
-
Walker, M.S.1
DeMoss, J.A.2
-
76
-
-
0028138946
-
NarL-phosphate must bind to multiple upstream sites to activate transcription from the narG promoter of Escherichia coli
-
Walker, M. S., and J. A. DeMoss. 1994. NarL-phosphate must bind to multiple upstream sites to activate transcription from the narG promoter of Escherichia coli. Mol. Microbiol. 14:633-641.
-
(1994)
Mol. Microbiol
, vol.14
, pp. 633-641
-
-
Walker, M.S.1
DeMoss, J.A.2
-
77
-
-
0032835980
-
The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite
-
Wang, H., C.-P. Tseng, and R. P. Gunsalus. 1999. The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite. J. Bacteriol. 181:5303-5308.
-
(1999)
J. Bacteriol
, vol.181
, pp. 5303-5308
-
-
Wang, H.1
Tseng, C.-P.2
Gunsalus, R.P.3
-
78
-
-
0018071782
-
Regulation of lac operon expression: Reappraisal of the theory of catabolite repression
-
Wanner, B. L., R. Kodaira, and F. C. Neidhardt. 1978. Regulation of lac operon expression: reappraisal of the theory of catabolite repression. J. Bacteriol. 136:947-954.
-
(1978)
J. Bacteriol
, vol.136
, pp. 947-954
-
-
Wanner, B.L.1
Kodaira, R.2
Neidhardt, F.C.3
-
79
-
-
0027429065
-
The galactose regulon of Escherichia coli
-
Weickert, M. J., and S. Adhya. 1993. The galactose regulon of Escherichia coli. Mol. Microbiol. 10:245-251.
-
(1993)
Mol. Microbiol
, vol.10
, pp. 245-251
-
-
Weickert, M.J.1
Adhya, S.2
-
80
-
-
0025289761
-
Substitution of 2 base pairs (1 base pair per DNA half-site) within the Escherichia coli lac promoter DNA site for catabolite gene activator protein places the lac promoter in the FNR regulon
-
Zhang, X. P., and R. H. Ebright. 1990. Substitution of 2 base pairs (1 base pair per DNA half-site) within the Escherichia coli lac promoter DNA site for catabolite gene activator protein places the lac promoter in the FNR regulon. J. Biol. Chem. 265:12400-12403.
-
(1990)
J. Biol. Chem
, vol.265
, pp. 12400-12403
-
-
Zhang, X.P.1
Ebright, R.H.2
|