-
1
-
-
0037216619
-
Mutational analysis of a conserved signal-transducing element: The HAMP linker of the Escherichia coli nitrate sensor NarX
-
Appleman, J. A., and V. Stewart. 2003. Mutational analysis of a conserved signal-transducing element: the HAMP linker of the Escherichia coli nitrate sensor NarX. J. Bacteriol. 185:89-97.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 89-97
-
-
Appleman, J.A.1
Stewart, V.2
-
2
-
-
19044394317
-
Oxygen and nitrate-dependent regulation of dmsABC operon expression in Escherichia coli: Sites for Fnr and NarL protein interactions
-
Bearson, S. M., J. A. Albrecht, and R. P. Gunsalus. 2002. Oxygen and nitrate-dependent regulation of dmsABC operon expression in Escherichia coli: sites for Fnr and NarL protein interactions. BMC Microbiol. 2:13.
-
(2002)
BMC Microbiol.
, vol.2
, pp. 13
-
-
Bearson, S.M.1
Albrecht, J.A.2
Gunsalus, R.P.3
-
3
-
-
0033983166
-
Towards single-copy gene expression systems making gene cloning physiologically relevant: Lambda InCh, a simple Escherichia coli plasmid-chromosome shuttle system
-
Boyd, D., D. S. Weiss, J. C. Chen, and J. Beckwith. 2000. Towards single-copy gene expression systems making gene cloning physiologically relevant: lambda InCh, a simple Escherichia coli plasmid-chromosome shuttle system. J. Bacteriol. 182:842-847.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 842-847
-
-
Boyd, D.1
Weiss, D.S.2
Chen, J.C.3
Beckwith, J.4
-
4
-
-
0029990165
-
Analysis of nitrate regulatory protein NarL-binding sites in the fdnG and narG operon control regions of Escherichia coli K-12
-
Darwin, A. J., J. Li, and V. Stewart. 1996. Analysis of nitrate regulatory protein NarL-binding sites in the fdnG and narG operon control regions of Escherichia coli K-12. Mol. Microbiol. 20:621-632.
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 621-632
-
-
Darwin, A.J.1
Li, J.2
Stewart, V.3
-
5
-
-
0001979728
-
The Nar modulon systems: Nitrate and nitrite regulation of anaerobic gene expression
-
E. C. C. Lin and A. S. Lynch (ed.). R. G. Landes Biomedical Publishers, Austin, Tex.
-
Darwin, A. J., and V. Stewart. 1996. The Nar modulon systems: nitrate and nitrite regulation of anaerobic gene expression, p. 343-359. In E. C. C. Lin and A. S. Lynch (ed.), Regulation of gene expression in Escherichia coli. R. G. Landes Biomedical Publishers, Austin, Tex.
-
(1996)
Regulation of Gene Expression in Escherichia coli
, pp. 343-359
-
-
Darwin, A.J.1
Stewart, V.2
-
6
-
-
0029086289
-
Nitrate and nitrite regulation of the Fnr-dependent aeg-46.5 promoter of Escherichia coli K-12 is mediated by competition between homologous response regulators (NarL and NarP) for a common DNA-binding site
-
Darwin, A. J., and V. Stewart. 1995. Nitrate and nitrite regulation of the Fnr-dependent aeg-46.5 promoter of Escherichia coli K-12 is mediated by competition between homologous response regulators (NarL and NarP) for a common DNA-binding site. J. Mol. Biol. 251:15-29.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 15-29
-
-
Darwin, A.J.1
Stewart, V.2
-
7
-
-
0030868258
-
Differential regulation by the homologous response regulators NarL and NarP of Escherichia coli K-12 depends on DNA binding site arrangement
-
Darwin, A. J., K. L. Tyson, S. J. Busby, and V. Stewart. 1997. Differential regulation by the homologous response regulators NarL and NarP of Escherichia coli K-12 depends on DNA binding site arrangement. Mol. Microbiol. 25:583-595.
-
(1997)
Mol. Microbiol.
, vol.25
, pp. 583-595
-
-
Darwin, A.J.1
Tyson, K.L.2
Busby, S.J.3
Stewart, V.4
-
8
-
-
0031856846
-
Fnr, NarP, and NarL regulation of Escherichia coli K-12 napF (periplasmic nitrate reductase) operon transcription in vitro
-
Darwin, A. J., E. C. Ziegelhoffer, P. J. Kiley, and V. Stewart. 1998. Fnr, NarP, and NarL regulation of Escherichia coli K-12 napF (periplasmic nitrate reductase) operon transcription in vitro. J. Bacteriol. 180:4192-4198.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4192-4198
-
-
Darwin, A.J.1
Ziegelhoffer, E.C.2
Kiley, P.J.3
Stewart, V.4
-
9
-
-
4243449857
-
The influence of nitrate and nitrite reduction on catabolite repression in Escherichia coli
-
Dobrogosz, W. 1965. The influence of nitrate and nitrite reduction on catabolite repression in Escherichia coli. Biochim. Biophys. Acta 100:553-566.
-
(1965)
Biochim. Biophys. Acta
, vol.100
, pp. 553-566
-
-
Dobrogosz, W.1
-
10
-
-
0026681639
-
Upstream sequence elements required for NarL-mediated activation of transcription from the narGHJI promoter of Escherichia coli
-
Dong, X. R., S. F. Li, and J. A. DeMoss. 1992. Upstream sequence elements required for NarL-mediated activation of transcription from the narGHJI promoter of Escherichia coli. J. Biol. Chem. 267:14122-14128.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 14122-14128
-
-
Dong, X.R.1
Li, S.F.2
DeMoss, J.A.3
-
11
-
-
0033984062
-
Conversion of the Fibrio fischeri transcriptional activator, LuxR, to a repressor
-
Egland, K. A., and E. P. Greenberg. 2000. Conversion of the Fibrio fischeri transcriptional activator, LuxR, to a repressor. J. Bacteriol. 182:805-811.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 805-811
-
-
Egland, K.A.1
Greenberg, E.P.2
-
12
-
-
0000598585
-
Respiration
-
F. C. Neidhardt (ed.). ASM Press, Washington, D.C.
-
Gennis, R. B., and V. Stewart. 1996. Respiration, p. 217-261. In F. C. Neidhardt (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, 2nd Ed.
, pp. 217-261
-
-
Gennis, R.B.1
Stewart, V.2
-
13
-
-
0031884183
-
Use of new methods for construction of tightly regulated arabinose and rhamnose promoter fusions in studies of the Escherichia coli phosphate regulon
-
Haldimann, A., L. L. Daniels, and B. L. Wanner. 1998. Use of new methods for construction of tightly regulated arabinose and rhamnose promoter fusions in studies of the Escherichia coli phosphate regulon. J. Bacteriol. 180:1277-1286.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 1277-1286
-
-
Haldimann, A.1
Daniels, L.L.2
Wanner, B.L.3
-
14
-
-
0023463012
-
Mutants of the catabolite activator protein of Escherichia coli that are specifically deficient in the gene-activation function
-
Irwin, N., and M. Ptashne. 1987. Mutants of the catabolite activator protein of Escherichia coli that are specifically deficient in the gene-activation function. Proc. Natl. Acad. Sci. USA 84:8315-8319.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 8315-8319
-
-
Irwin, N.1
Ptashne, M.2
-
15
-
-
0032457906
-
Oxygen sensing by the global regulator, FNR: The role of the iron-sulfur cluster
-
Kiley, P. J., and H. Beinert. 1998. Oxygen sensing by the global regulator, FNR: the role of the iron-sulfur cluster. FEMS Microbiol. Rev. 22:341-352.
-
(1998)
FEMS Microbiol. Rev.
, vol.22
, pp. 341-352
-
-
Kiley, P.J.1
Beinert, H.2
-
16
-
-
0025300970
-
Efficient site directed in vitro mutagenesis using ampicillin selection
-
Lewis, M. K., and D. V. Thompson. 1990. Efficient site directed in vitro mutagenesis using ampicillin selection. Nucleic Acids Res. 18:3439-3443.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 3439-3443
-
-
Lewis, M.K.1
Thompson, D.V.2
-
17
-
-
0028023092
-
In vitro interaction of nitrate-responsive regulatory protein NarL with DNA target sequences in the fdnG, narG, nark and frdA operon control regions of Escherichia coli K-12
-
Li, J., S. Kustu, and V. Stewart. 1994. In vitro interaction of nitrate-responsive regulatory protein NarL with DNA target sequences in the fdnG, narG, nark and frdA operon control regions of Escherichia coli K-12. J. Mol. Biol. 241:150-165.
-
(1994)
J. Mol. Biol.
, vol.241
, pp. 150-165
-
-
Li, J.1
Kustu, S.2
Stewart, V.3
-
18
-
-
0026625770
-
Localization of upstream sequence elements required for nitrate and anaerobic induction of fdn (formate dehydrogenase-N) operon expression in Escherichia coli K-12
-
Li, J., and V. Stewart. 1992. Localization of upstream sequence elements required for nitrate and anaerobic induction of fdn (formate dehydrogenase-N) operon expression in Escherichia coli K-12. J. Bacteriol. 174:4935-4942.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4935-4942
-
-
Li, J.1
Stewart, V.2
-
19
-
-
0003953058
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Maloy, S. R., V. J. Stewart, and R. K. Taylor. 1996. Genetic analysis of pathogenic bacteria: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1996)
Genetic Analysis of Pathogenic Bacteria: A Laboratory Manual
-
-
Maloy, S.R.1
Stewart, V.J.2
Taylor, R.K.3
-
20
-
-
0019332578
-
lac promoter mutations located downstream from the transcription start site
-
Maquat, L., K. Thornton, and W. Reznikoff. 1980. lac promoter mutations located downstream from the transcription start site. J. Mol. Biol. 139:537-549.
-
(1980)
J. Mol. Biol.
, vol.139
, pp. 537-549
-
-
Maquat, L.1
Thornton, K.2
Reznikoff, W.3
-
21
-
-
0036786677
-
Dimerization allows DNA target site recognition by the NarL response regulator
-
Maris, A. E., M. R. Sawaya, M. Kaczor-Grzeskowiak, M. R. Jarvis, S. M. Bearson, M. L. Kopka, I. Schröder, R. P. Gunsalus, and R. E. Dickerson. 2002. Dimerization allows DNA target site recognition by the NarL response regulator. Nat. Struct. Biol. 9:771-778.
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 771-778
-
-
Maris, A.E.1
Sawaya, M.R.2
Kaczor-Grzeskowiak, M.3
Jarvis, M.R.4
Bearson, S.M.5
Kopka, M.L.6
Schröder, I.7
Gunsalus, R.P.8
Dickerson, R.E.9
-
22
-
-
0003785155
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
23
-
-
0025343547
-
The three operators of the lac operon cooperate in repression
-
Oehler, S., E. R. Eismann, H. Kramer, and B. Müller-Hill. 1990. The three operators of the lac operon cooperate in repression. EMBO J. 9:973-979.
-
(1990)
EMBO J.
, vol.9
, pp. 973-979
-
-
Oehler, S.1
Eismann, E.R.2
Kramer, H.3
Müller-Hill, B.4
-
24
-
-
0028604471
-
Rapid confirmation of single copy lambda prophage integration by PCR
-
Erratum, 23:1278, 1995
-
Powell, B. S., M. P. Rivas, D. L. Court, Y. Nakamura, and C. L. Turnbough, Jr. 1994. Rapid confirmation of single copy lambda prophage integration by PCR. Nucleic Acids Res. 22:5765-5766. (Erratum, 23:1278, 1995.)
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5765-5766
-
-
Powell, B.S.1
Rivas, M.P.2
Court, D.L.3
Nakamura, Y.4
Turnbough C.L., Jr.5
-
25
-
-
0027251261
-
Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12
-
Rabin, R. S., and V. Stewart. 1993. Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12. J. Bacteriol. 175:3259-3268.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3259-3268
-
-
Rabin, R.S.1
Stewart, V.2
-
27
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R. W., F. Houman, and N. Kleckner. 1987. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53:85-96.
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
28
-
-
0022719327
-
pHG165: A pBR322 copy number derivative of pUC8 for cloning and expression
-
Stewart, G. S. A. B., S. Lubinsky-Mink, C. G. Jackson, A. Kassel, and J. Kuhn. 1986. pHG165: a pBR322 copy number derivative of pUC8 for cloning and expression. Plasmid 15:172-181.
-
(1986)
Plasmid
, vol.15
, pp. 172-181
-
-
Stewart, G.S.A.B.1
Lubinsky-Mink, S.2
Jackson, C.G.3
Kassel, A.4
Kuhn, J.5
-
29
-
-
0036182372
-
Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12
-
Stewart, V., Y. Lu, and A. J. Darwin. 2002. Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12. J. Bacteriol. 184:1314-1323.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 1314-1323
-
-
Stewart, V.1
Lu, Y.2
Darwin, A.J.3
-
30
-
-
0023991777
-
Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12
-
Stewart, V., and J. Parales, Jr. 1988. Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12. J. Bacteriol. 170:1589-1597.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 1589-1597
-
-
Stewart, V.1
Parales J., Jr.2
-
31
-
-
0001943573
-
Dual sensors and dual response regulators interact to control nitrate- and nitrite-responsive gene expression in Escherichia coli
-
J. A. Hoch and T. J. Silhavy (ed.). ASM Press, Washington, D.C.
-
Stewart, V., and R. S. Rabin. 1995. Dual sensors and dual response regulators interact to control nitrate- and nitrite-responsive gene expression in Escherichia coli, p. 233-252. In J. A. Hoch and T. J. Silhavy (ed.), Two-component signal transduction. ASM Press, Washington, D.C.
-
(1995)
Two-Component Signal Transduction
, pp. 233-252
-
-
Stewart, V.1
Rabin, R.S.2
-
32
-
-
0019176377
-
The isolation and characterization of mutants defective in nitrate assimilation in Neurospora crassa
-
Tomsett, A. B., and R. H. Garrett. 1980. The isolation and characterization of mutants defective in nitrate assimilation in Neurospora crassa. Genetics 95:649-660.
-
(1980)
Genetics
, vol.95
, pp. 649-660
-
-
Tomsett, A.B.1
Garrett, R.H.2
-
33
-
-
0027452664
-
Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: Interactions between FNR and NarL
-
Tyson, K. L., A. I. Bell, J. A. Cole, and S. J. W. Busby. 1993. Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: interactions between FNR and NarL. Mol. Microbiol. 7:151-157.
-
(1993)
Mol. Microbiol.
, vol.7
, pp. 151-157
-
-
Tyson, K.L.1
Bell, A.I.2
Cole, J.A.3
Busby, S.J.W.4
-
34
-
-
0028113993
-
Nitrite and nitrate regulation at the promoters of two Escherichia coli operons encoding nitrite reductase: Identification of common target heptamers for both NarP- and NarL-dependent regulation
-
Tyson, K. L., J. A. Cole, and S. J. W. Busby. 1994. Nitrite and nitrate regulation at the promoters of two Escherichia coli operons encoding nitrite reductase: identification of common target heptamers for both NarP- and NarL-dependent regulation. Mol. Microbiol. 13:1045-1055.
-
(1994)
Mol. Microbiol.
, vol.13
, pp. 1045-1055
-
-
Tyson, K.L.1
Cole, J.A.2
Busby, S.J.W.3
-
35
-
-
0033814304
-
The nrfA and nirB nitrite reductase operons in Escherichia coli are expressed differently in response to nitrate than to nitrite
-
Wang, H., and R. P. Gunsalus. 2000. The nrfA and nirB nitrite reductase operons in Escherichia coli are expressed differently in response to nitrate than to nitrite. J. Bacteriol. 182:5813-5822.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5813-5822
-
-
Wang, H.1
Gunsalus, R.P.2
-
36
-
-
0032835980
-
The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite
-
Wang, H., C. P. Tseng, and R. P. Gunsalus. 1999. The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite. J. Bacteriol. 181:5303-5308.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5303-5308
-
-
Wang, H.1
Tseng, C.P.2
Gunsalus, R.P.3
-
37
-
-
0030694514
-
Discrimination between structurally related ligands nitrate and nitrite controls autokinase activity of the NarX transmembrane signal transducer of Escherichia coli K-12
-
Williams, S. B., and V. Stewart. 1997. Discrimination between structurally related ligands nitrate and nitrite controls autokinase activity of the NarX transmembrane signal transducer of Escherichia coli K-12. Mol. Microbiol. 26:911-925.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 911-925
-
-
Williams, S.B.1
Stewart, V.2
-
38
-
-
0032526674
-
Repression of transcription initiation by Escherichia coli FNR protein: Repression by FNR can be simple
-
Williams, S. M., H. J. Wing, and S. J. W. Busby. 1998. Repression of transcription initiation by Escherichia coli FNR protein: repression by FNR can be simple. FEMS Microbiol. Lett. 163:203-208.
-
(1998)
FEMS Microbiol. Lett.
, vol.163
, pp. 203-208
-
-
Williams, S.M.1
Wing, H.J.2
Busby, S.J.W.3
-
39
-
-
0031974456
-
Regulation of transcription initiation at the Escherichia coli nir operon promoter: A new mechanism to account for codependence on two transcription factors
-
Wu, H., K. L. Tyson, J. A. Cole, and S. J. W. Busby. 1998. Regulation of transcription initiation at the Escherichia coli nir operon promoter: a new mechanism to account for codependence on two transcription factors. Mol. Microbiol. 27:493-505.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 493-505
-
-
Wu, H.1
Tyson, K.L.2
Cole, J.A.3
Busby, S.J.W.4
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