-
1
-
-
36549083651
-
RNA catalysis: ribozymes, ribosomes, and riboswitches
-
Strobel S.A., and Cochrane J.C. RNA catalysis: ribozymes, ribosomes, and riboswitches. Curr. Opin. Chem. Biol. 11 (2007) 636-643
-
(2007)
Curr. Opin. Chem. Biol.
, vol.11
, pp. 636-643
-
-
Strobel, S.A.1
Cochrane, J.C.2
-
3
-
-
20444441572
-
Ribozyme catalysis: not different, just worse
-
Doudna J.A., and Lorsch J.R. Ribozyme catalysis: not different, just worse. Nat. Struct. Mol. Biol. 12 (2005) 395-402
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 395-402
-
-
Doudna, J.A.1
Lorsch, J.R.2
-
4
-
-
36849148382
-
The RNA world
-
Gilbert W. The RNA world. Nature 319 (1986) 618
-
(1986)
Nature
, vol.319
, pp. 618
-
-
Gilbert, W.1
-
6
-
-
0017232521
-
Coenzymes as fossils of an earlier metabolic state
-
White III H.B. Coenzymes as fossils of an earlier metabolic state. J. Mol. Evol. 7 (1990) 101-104
-
(1990)
J. Mol. Evol.
, vol.7
, pp. 101-104
-
-
White III, H.B.1
-
7
-
-
0025074907
-
In vitro selection of RNA molecules that bind specific ligands
-
Ellington A.D., and Szostak J.W. In vitro selection of RNA molecules that bind specific ligands. Nature 346 (1990) 818-822
-
(1990)
Nature
, vol.346
, pp. 818-822
-
-
Ellington, A.D.1
Szostak, J.W.2
-
8
-
-
0025194307
-
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
-
Tuerk C., and Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 249 (1990) 505-510
-
(1990)
Science
, vol.249
, pp. 505-510
-
-
Tuerk, C.1
Gold, L.2
-
9
-
-
0024443885
-
Amplification, mutation and selection of catalytic RNA
-
Joyce G.F. Amplification, mutation and selection of catalytic RNA. Gene 82 (1989) 83-87
-
(1989)
Gene
, vol.82
, pp. 83-87
-
-
Joyce, G.F.1
-
10
-
-
23644453112
-
DNA catalysis: potential, limitations, open questions
-
Peracchi A. DNA catalysis: potential, limitations, open questions. ChemBioChem 6 (2005) 1312-1316
-
(2005)
ChemBioChem
, vol.6
, pp. 1312-1316
-
-
Peracchi, A.1
-
12
-
-
37549019376
-
Recent advances in DNA catalysis
-
Hobärtner C., and Silverman S.K. Recent advances in DNA catalysis. Biopolymers 87 (2007) 279-292
-
(2007)
Biopolymers
, vol.87
, pp. 279-292
-
-
Hobärtner, C.1
Silverman, S.K.2
-
13
-
-
33751247017
-
Functional DNA nanotechnology: emerging applications of DNAzymes and aptamers
-
Lu Y., and Liu J. Functional DNA nanotechnology: emerging applications of DNAzymes and aptamers. Curr. Opin. Biotechnol. 17 (2006) 580-588
-
(2006)
Curr. Opin. Biotechnol.
, vol.17
, pp. 580-588
-
-
Lu, Y.1
Liu, J.2
-
14
-
-
34249672905
-
Ribozyme catalysis of metabolism in the RNA world
-
Chen X., Li N., and Ellington A.D. Ribozyme catalysis of metabolism in the RNA world. Chem. Biodivers. 4 (2007) 633-655
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 633-655
-
-
Chen, X.1
Li, N.2
Ellington, A.D.3
-
16
-
-
0038305458
-
Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors
-
Sancar A. Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors. Chem. Rev. 103 (2003) 2203-2237
-
(2003)
Chem. Rev.
, vol.103
, pp. 2203-2237
-
-
Sancar, A.1
-
17
-
-
0026503938
-
The third chromophore of DNA photolyase: Trp-277 of Escherichia coli DNA photolyase repairs thymine dimers by direct electron transfer
-
Kim S.T., Li Y.F., and Sancar A. The third chromophore of DNA photolyase: Trp-277 of Escherichia coli DNA photolyase repairs thymine dimers by direct electron transfer. Proc. Natl Acad. Sci. USA 89 (1992) 900-904
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 900-904
-
-
Kim, S.T.1
Li, Y.F.2
Sancar, A.3
-
18
-
-
0029118241
-
Role of tryptophans in substrate binding and catalysis by DNA photolyase
-
Kim S.T., Heelis P.F., and Sancar A. Role of tryptophans in substrate binding and catalysis by DNA photolyase. Methods Enzymol. 258 (1995) 319-343
-
(1995)
Methods Enzymol.
, vol.258
, pp. 319-343
-
-
Kim, S.T.1
Heelis, P.F.2
Sancar, A.3
-
19
-
-
33845280483
-
Photosensitized cleavage of a thymine dimer by an antibody
-
Cochran A.G., Sugasawara R., and Schultz P.G. Photosensitized cleavage of a thymine dimer by an antibody. J. Am. Chem. Soc. 110 (1988) 7888-7890
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 7888-7890
-
-
Cochran, A.G.1
Sugasawara, R.2
Schultz, P.G.3
-
20
-
-
0029009433
-
Mechanistic studies of antibody-catalyzed pyrmidine dimer photocleavage
-
Jacobsen J.R., Cochran A.G., Stephans J.C., King D.S., and Schultz P.G. Mechanistic studies of antibody-catalyzed pyrmidine dimer photocleavage. J. Am. Chem. Soc. 117 (1995) 5453-5461
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5453-5461
-
-
Jacobsen, J.R.1
Cochran, A.G.2
Stephans, J.C.3
King, D.S.4
Schultz, P.G.5
-
21
-
-
0347089036
-
A deoxyribozyme that harnesses light to repair thymine dimers in DNA
-
Chinnapen D.J., and Sen D. A deoxyribozyme that harnesses light to repair thymine dimers in DNA. Proc. Natl Acad. Sci. USA 101 (2004) 65-69
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 65-69
-
-
Chinnapen, D.J.1
Sen, D.2
-
22
-
-
33846023648
-
Towards elucidation of the mechanism of UV1C, a deoxyribozyme with photolyase activity
-
Chinnapen D.J., and Sen D. Towards elucidation of the mechanism of UV1C, a deoxyribozyme with photolyase activity. J. Mol. Biol. 365 (2007) 1326-1336
-
(2007)
J. Mol. Biol.
, vol.365
, pp. 1326-1336
-
-
Chinnapen, D.J.1
Sen, D.2
-
23
-
-
0026050396
-
Effect of base, pentose, and phosphodiester backbone structures on binding and repair of pyrimidine dimers by Escherichia coli DNA photolyase
-
Kim S.T., and Sancar A. Effect of base, pentose, and phosphodiester backbone structures on binding and repair of pyrimidine dimers by Escherichia coli DNA photolyase. Biochemistry 30 (1991) 8623-8630
-
(1991)
Biochemistry
, vol.30
, pp. 8623-8630
-
-
Kim, S.T.1
Sancar, A.2
-
24
-
-
0032508468
-
Following G-quartet formation by UV-spectroscopy
-
Mergny J.L., Phan A.T., and Lacroix L. Following G-quartet formation by UV-spectroscopy. FEBS Lett. 435 (1998) 74-78
-
(1998)
FEBS Lett.
, vol.435
, pp. 74-78
-
-
Mergny, J.L.1
Phan, A.T.2
Lacroix, L.3
-
25
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
26
-
-
0026334916
-
Determination of rates and yields of interchromophore (folate-flavin) energy transfer and intermolecular (flavin-DNA) electron transfer in Escherichia coli photolyase by time-resolved fluorescence and absorption spectroscopy
-
Kim S.T., Heelis P.F., Okamura T., Hirata Y., Mataga N., and Sancar A. Determination of rates and yields of interchromophore (folate-flavin) energy transfer and intermolecular (flavin-DNA) electron transfer in Escherichia coli photolyase by time-resolved fluorescence and absorption spectroscopy. Biochemistry 30 (1991) 11262-11270
-
(1991)
Biochemistry
, vol.30
, pp. 11262-11270
-
-
Kim, S.T.1
Heelis, P.F.2
Okamura, T.3
Hirata, Y.4
Mataga, N.5
Sancar, A.6
-
27
-
-
0038116610
-
cis-Cyn thymidine dimer repair by DNA photolyase in real time
-
MacFarlane A.W., and Stanley R.J. cis-Cyn thymidine dimer repair by DNA photolyase in real time. Biochemistry 42 (2003) 8558-8568
-
(2003)
Biochemistry
, vol.42
, pp. 8558-8568
-
-
MacFarlane, A.W.1
Stanley, R.J.2
-
28
-
-
13844256579
-
Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase
-
Weber S. Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase. Biochim. Biophys. Acta 1707 (2005) 1
-
(2005)
Biochim. Biophys. Acta
, vol.1707
, pp. 1
-
-
Weber, S.1
-
29
-
-
0027516630
-
The photo repair of pyrimidine dimers by DNA photolyase and model systems
-
Heelis P.F., Kim S.T., Okamura T., and Sancar A. The photo repair of pyrimidine dimers by DNA photolyase and model systems. J. Photochem. Photobiol. B 17 (1993) 219-228
-
(1993)
J. Photochem. Photobiol. B
, vol.17
, pp. 219-228
-
-
Heelis, P.F.1
Kim, S.T.2
Okamura, T.3
Sancar, A.4
-
30
-
-
1642414252
-
The efficiency of photolyase and indole complexes to repair DNA containing dimers of pyrimidine: a theoretical analysis of the electron transfer reactions
-
Volcov F., and Goldman C. The efficiency of photolyase and indole complexes to repair DNA containing dimers of pyrimidine: a theoretical analysis of the electron transfer reactions. J. Chem. Phys. 120 (2004) 3381-3386
-
(2004)
J. Chem. Phys.
, vol.120
, pp. 3381-3386
-
-
Volcov, F.1
Goldman, C.2
-
32
-
-
0024114751
-
Transient intermediates in intramolecularly photosensitized pyrimidine dimer splitting by indole derivatives
-
Young T., Kim S.-T., Van Camp J.R., Hartman R.F., and Rose S.D. Transient intermediates in intramolecularly photosensitized pyrimidine dimer splitting by indole derivatives. Photochem. Photobiol. 48 (1988) 635-641
-
(1988)
Photochem. Photobiol.
, vol.48
, pp. 635-641
-
-
Young, T.1
Kim, S.-T.2
Van Camp, J.R.3
Hartman, R.F.4
Rose, S.D.5
-
33
-
-
84987049392
-
Transient intermediates in intramolecularly photosensitized pyrimidine dimer splitting by indole derivatives
-
Kim S.-T., and Rose S.D. Transient intermediates in intramolecularly photosensitized pyrimidine dimer splitting by indole derivatives. J. Phys. Org. Chem. 3 (1990) 581
-
(1990)
J. Phys. Org. Chem.
, vol.3
, pp. 581
-
-
Kim, S.-T.1
Rose, S.D.2
-
34
-
-
0001323533
-
Efficient pyrimidine dimer radical anion splitting in low polarity solvents
-
Hartzfeld D.G., and Rose. Efficient pyrimidine dimer radical anion splitting in low polarity solvents. J. Am. Chem. Soc. 115 (1993) 850-854
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 850-854
-
-
Hartzfeld, D.G.1
Rose2
-
35
-
-
0032169981
-
DNA-enhanced peroxidase activity of a DNA-aptamer-hemin complex
-
Travascio P., Li Y., and Sen D. DNA-enhanced peroxidase activity of a DNA-aptamer-hemin complex. Chem. Biol. 5 (1998) 505-517
-
(1998)
Chem. Biol.
, vol.5
, pp. 505-517
-
-
Travascio, P.1
Li, Y.2
Sen, D.3
-
36
-
-
0000705264
-
Electronic spectra of jet-cooled indoles: evidence for the 1La state
-
Hager J.W., Demmer D.R., and Wallace S.C. Electronic spectra of jet-cooled indoles: evidence for the 1La state. J. Phys. Chem. 91 (1987) 1375-1382
-
(1987)
J. Phys. Chem.
, vol.91
, pp. 1375-1382
-
-
Hager, J.W.1
Demmer, D.R.2
Wallace, S.C.3
-
37
-
-
10044281511
-
Efficient deactivation of a model base pair via excited-state hydrogen transfer
-
Schultz T., Samoylova E., Radloff W., Hertel I.V., Sobolewski A.L., and Domcke W. Efficient deactivation of a model base pair via excited-state hydrogen transfer. Science 306 (2004) 1765-1768
-
(2004)
Science
, vol.306
, pp. 1765-1768
-
-
Schultz, T.1
Samoylova, E.2
Radloff, W.3
Hertel, I.V.4
Sobolewski, A.L.5
Domcke, W.6
-
38
-
-
0001498520
-
Role of heterogeneity of the solvation site in electronic spectra in solution
-
Galley W.C., and Purkey R.M. Role of heterogeneity of the solvation site in electronic spectra in solution. Proc. Natl Acad. Sci. 67 (1970) 1116-1121
-
(1970)
Proc. Natl Acad. Sci.
, vol.67
, pp. 1116-1121
-
-
Galley, W.C.1
Purkey, R.M.2
-
39
-
-
11844294066
-
Photochemical selectivity in guanine-cytosine base-pair structures
-
Abo-Riziq A., Grace L., Nir E., Kabelac M., Hobza P., and de Vries M.S. Photochemical selectivity in guanine-cytosine base-pair structures. Proc. Natl Acad. Sci. USA 102 (2005) 20-23
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 20-23
-
-
Abo-Riziq, A.1
Grace, L.2
Nir, E.3
Kabelac, M.4
Hobza, P.5
de Vries, M.S.6
-
40
-
-
0033152895
-
The origin of the genetic code: amino acids as cofactors in an RNA world
-
Szathmáry E. The origin of the genetic code: amino acids as cofactors in an RNA world. Trends Genet. 15 (1999) 223-229
-
(1999)
Trends Genet.
, vol.15
, pp. 223-229
-
-
Szathmáry, E.1
-
42
-
-
0036760723
-
Coenzymes as coribozymes
-
Jadhav V.R., and Yarus M. Coenzymes as coribozymes. Biochimie 84 (2002) 877-888
-
(2002)
Biochimie
, vol.84
, pp. 877-888
-
-
Jadhav, V.R.1
Yarus, M.2
-
43
-
-
34249672905
-
Ribozyme catalysis of metabolism in the RNA world
-
Chen X., Li N., and Ellington A.D. Ribozyme catalysis of metabolism in the RNA world. Chem. Biodivers. 4 (2007) 633-655
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 633-655
-
-
Chen, X.1
Li, N.2
Ellington, A.D.3
|