Human and murine kidneys show gender- And species-specific gene expression differences in response to injury

PLoS ONE

Volumn 4, Issue 3, 2009, Pages

  Si, Han ^a   Banga, Ramandeep S ^a   Kapitsinou, Pinelopi ^a   Ramaiah, Manjunath ^a   Lawrence, Janis ^a   Kambhampati, Ganesh ^a   Gruenwald, Antje ^a   Bottinger, Erwin ^c   Glicklich, Daniel ^a   Tellis, Vivian ^b   Greenstein, Stuart ^b   Thomas, David B ^b   Pullman, James ^b   Fazzari, Melissa ^a   Susztak, Katalin ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

^b MONTEFIORE MEDICAL CENTER   (United States)

^c MOUNT SINAI SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DOXORUBICIN; MESSENGER RNA;

ADULT; ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; AUTOSOME; BAGG ALBINO MOUSE; CONTROLLED STUDY; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE IDENTIFICATION; GLOMERULUS; HUMAN; HUMAN TISSUE; HUMAN VERSUS ANIMAL COMPARISON; KIDNEY FAILURE; KIDNEY TUBULE; MALE; MOUSE; NEPHROTIC SYNDROME; NONHUMAN; SEX CHROMOSOME; SEX DIFFERENCE; SPECIES DIFFERENCE; ALBUMINURIA; ANIMAL; BIOSYNTHESIS; CHEMICALLY INDUCED DISORDER; COMPARATIVE STUDY; DONOR; DRUG EFFECT; GENETICS; KIDNEY; KIDNEY DISEASE; METABOLISM; MIDDLE AGED; PHENOTYPE; SEXUAL DEVELOPMENT;

MURINAE; MUS;

ADULT; ALBUMINURIA; ANIMALS; DOXORUBICIN; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; HUMANS; KIDNEY; KIDNEY DISEASES; KIDNEY GLOMERULUS; MALE; MICE; MICE, INBRED BALB C; MIDDLE AGED; PHENOTYPE; RNA, MESSENGER; SEX CHARACTERISTICS; SPECIES SPECIFICITY; TISSUE DONORS;

EID: 62849103648     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0004802     Document Type: Article

References (34)

1. US Renal Data System. USRDS 2007 Annual Report: Atlas of Chronic Kidney Disease and End-Stage Renal Disease in the United States. BethesdaMd: National Institute of Diabetes and Digestive and Kidney Diseases).
2. Coresh J, Astor BC, Greene T, Eknoyan G, Levey AS (2003) Prevalence of chronic kidney disease and decreased kidney function in the adult US population: Third National Health and Nutrition Examination Survey. Am J Kidney Dis 41: 1-12.
3. Schoolwerth AC, Engelgau MM, Hostetter TH, Rufo KH, Chianchiano D, et al. (2006) Chronic kidney disease: a public health problem that needs a public health action plan. Prev Chronic Dis 3: A57.
4. Neugarten J, Acharya A, Silbiger SR (2000) Effect of gender on the progression of nondiabetic renal disease: a meta-analysis. J Am Soc Nephrol 11: 319-329.
5. Cowley BD Jr, Rupp JC, Muessel MJ, Gattone VH 2nd (1997) Gender and the effect of gonadal hormones on the progression of inherited polycystic kidney disease in rats. Am J Kidney Dis 29: 265-272.
6. Baylis C (1994) Age-dependent glomerular damage in the rat. Dissociation between glomerular injury and both glomerular hypertension and hypertrophy. Male gender as a primary risk factor. J Clin Invest 94: 1823-1829.
7. Joles JA, van Goor H, Koomans HA (1998) Estrogen induces glomerulosclerosis in analbuminemic rats. Kidney Int 53: 862-868.
8. Elliot SJ, Berho M, Korach K, Doublier S, Lupia E, et al. (2007) Gender-specific effects of endogenous testosterone: female alpha-estrogen receptor-deficient C57Bl/6J mice develop glomerulosclerosis. Kidney Int 72: 464-472.
9. McKenna NJ, O'Malley BW (2002) Combinatorial control of gene expression by nuclear receptors and coregulators. Cell 108: 465-474.
10. Gottlicher M, Heck S, Herrlich P (1998) Transcriptional cross-talk, the second mode of steroid hormone receptor action. J Mol Med 76: 480-489.
11. Edwards DP (2005) Regulation of signal transduction pathways by estrogen and progesterone. Annu Rev Physiol 67: 335-376.
12. Bjornstrom L, Sjoberg M (2005) Mechanisms of estrogen receptor signaling: convergence of genomic and nongenomic actions on target genes. Mol Endocrinol 19: 833-842.
13. Xu J, Burgoyne PS, Arnold AP (2002) Sex differences in sex chromosome gene expression in mouse brain. Hum Mol Genet 11: 1409-1419.
14. Carrel L, Willard HF (2005) X-inactivation profile reveals extensive variability in X-linked gene expression in females. Nature 434: 400-404.
15. Panning B, Dausman J, Jaenisch R (1997) X chromosome inactivation is mediated by Xist RNA stabilization. Cell 90: 907-916.
16. Penny GD, Kay GF, Sheardown SA, Rastan S, Brockdorff N (1996) Requirement for Xist in X chromosome inactivation. Nature 379: 131-137.
17. Brown CJ, Ballabio A, Rupert JL, Lafreniere RG, Grompe M, et al. (1991) A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 349: 38-44.
18. Graves JA (2006) Sex chromosome specialization and degeneration in mammals. Cell 124: 901-914.
19. Rinn JL, Rozowsky JS, Laurenzi IJ, Petersen PH, Zou K, et al. (2004) Major molecular differences between mammalian sexes are involved in drug metabolism and renal function. Dev Cell 6: 791-800.
20. Isensee J, Ruiz Noppinger P (2007) Sexually dimorphic gene expression in mammalian somatic tissue. Gend Med 4 Suppl B: S75-95.
21. Yang X, Schadt EE, Wang S, Wang H, Arnold AP, et al. (2006) Tissue-specific expression and regulation of sexually dimorphic genes in mice. Genome Res 16: 995-1004.
22. Tusher VG, Tibshirani R, Chu G (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A 98: 5116-5121.
23. De Boer E, Navis G, Tiebosch AT, De Jong PE, De Zeeuw D (1999) Systemic factors are involved in the pathogenesis of proteinuria-induced glomerulosclerosis in adriamycin nephrotic rats. J Am Soc Nephrol 10: 2359-2366.
24. Cohen CD, Kretzler M (2002) Gene expression analysis in microdissected renal tissue. Current challenges and strategies. Nephron 92: 522-528.
25. Wang PJ, McCarrey JR, Yang F, Page DC (2001) An abundance of X-linked genes expressed in spermatogonia. Nat Genet 27: 422-426.
26. Arnold AP, Burgoyne PS (2004) Are XX and XY brain cells intrinsically different? Trends Endocrinol Metab 15: 6-11.
27. Backes C, Keller A, Kuentzer J, Kneissl B, Comtesse N, et al. (2007) GeneTrail-advanced gene set enrichment analysis. Nucleic Acids Res 35: W186-192.
28. Ho Sui SJ, Mortimer JR, Arenillas DJ, Brumm J, Walsh CJ, et al. (2005) oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes. Nucleic Acids Res 33: 3154-3164.
29. Saifi GM, Chandra HS (1999) An apparent excess of sex- and reproductionrelated genes on the human X chromosome. Proc Biol Sci 266: 203-209.
30. Vawter MP, Evans S, Choudary P, Tomita H, Meador-Woodruff J, et al. (2004) Gender-specific gene expression in post-mortem human brain: localization to sex chromosomes. Neuropsychopharmacology 29: 373-384.
31. Tan JC, Wadia PP, Coram M, Grumet FC, Kambham N, et al. (2008) H-Y antibody development associates with acute rejection in female patients with male kidney transplants. Transplantation 86: 75-81.
32. Arnold AP (2004) Sex chromosomes and brain gender. Nat Rev Neurosci 5: 701-708.
33. Legraverend C, Mode A, Wells T, Robinson I, Gustafsson JA (1992) Hepatic steroid hydroxylating enzymes are controlled by the sexually dimorphic pattern of growth hormone secretion in normal and dwarf rats. Faseb J 6: 711-718.
34. Wiwi CA, Waxman DJ (2004) Role of hepatocyte nuclear factors in growth hormone-regulated, sexually dimorphic expression of liver cytochromes P450. Growth Factors 22: 79-88.