Sex chromosome specialization and degeneration in mammals

Cell

Volumn 124, Issue 5, 2006, Pages 901-914

  Graves, Jennifer A Marshall ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CELL DEGENERATION; CELL SPECIFICITY; CHROMOSOME INACTIVATION; CHROMOSOME PAIRING; EVOLUTION; GENE FUNCTION; GENOME ANALYSIS; MAMMAL; MAMMAL CELL; NONHUMAN; PRIORITY JOURNAL; REVIEW; SEX CHROMOSOME; SEX DETERMINATION; SOMATIC CELL GENETICS; SPECIES EXTINCTION; X CHROMOSOME; Y CHROMOSOME;

MAMMALIA;

EID: 33644761962     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cell.2006.02.024     Document Type: Review

References (77)

1. R.J. Aitken, and J.A.M. Graves The future of sex Nature 415 2002 963
2. Y. Arakawa, C. Nishida-Umehara, Y. Matsuda, S. Sutou, and H. Suzuki X-chromosomal localization of mammalian Y-linked genes in two XO species of the Ryukyu spiny rat Cytogenet. Genome Res. 99 2002 303 309
3. A. Baumstark, H. Hameister, M. Hakhverdyan, I. Bakloushinskaya, and W. Just Characterization of Pisrt1/Foxl2 in Ellobius lutescens and exclusion as sex-determining genes Mamm. Genome 16 2005 281 289
4. L. Carrel, and H.F. Willard X-inactivation profile reveals extensive variability in X-linked gene expression in females Nature 434 2005 400 404
5. A.B. Carvalho Origin and evolution of the Drosophila Y chromosome Curr. Opin. Genet. Dev. 12 2002 664 668
6. A.B. Carvalho, and A.G. Clark Y chromosome of D. pseudoobscura is not homologous to the ancestral Drosophila Science 307 2005 108 110
7. B. Charlesworth, and D. Charlesworth The degeneration of Y chromosomes Philos Trans R Soc Lond Ser B 355 2000 1563 1572
8. D. Charlesworth, B. Charlesworth, and G. Marais Steps in the evolution of heteromorphic sex chromosomes Heredity 95 2005 118 128
9. D.W. Cooper, P.G. Johnston, J.A.M. Graves, and J.M. Watson X-inactivation in marsupials and monotremes Sem. Dev. Biol. 4 1993 117 128
10. M.L. Delbridge, P.A. Lingenfelter, C.M. Disteche, and J.A.M. Graves The candidate spermatogenesis gene RBMY has a homologue on the human X chromosome Nat. Genet. 22 1999 223 224
11. M.L. Delbridge, G. Longepied, D. Depetris, M.-G. Mattei, C.M. Disteche, J.A.M. Graves, and M.J. Mitchell TSPY, the candidate gonadoblastoma gene on the human Y chromosome, has a widely expressed homologue on the X - implications for Y chromosome evolution Chromosome Res. 12 2004 345 356
12. S. Dorus, S.L. Gilbert, M.L. Forster, R.J. Barndt, and B.T. Lahn The CDY-related gene family: coordinated evolution in copy number, expression profile and proten sequence Hum. Mol. Genet. 12 2003 1643 1650
13. H. Ellegren, and A.K. Fridolfsson Male-driven evolution of DNA sequences in birds Nat. Genet. 17 1997 182 184
14. T. Ezaz, A. Quinn, I. Miura, S. Sarre, A. Georges, and J.A.M. Graves The dragon lizard Pogona vitticeps has ZZ/ZW micro-sex chromosomes Chromosome Res. 13 2005 763 776
15. J.W. Foster, and J.A.M. Graves An SRY-related sequence on the marsupial X chromosome: implications for the evolution of the mammalian testis-determining gene Proc. Natl. Acad. Sci. USA 91 1994 1927 1931
16. K. Fredga Aberrant sex chromosome mechanisms in mammals. Evolutionary aspects Differentiation 23 Suppl. 1983 S23 S30
17. A.K. Fridolfsson, H. Cheng, N.G. Copeland, N.A. Jenkins, H.C. Liu, T. Raudsepp, T. Woodage, B. Chowdhary, J. Halverson, and H. Ellegren Evolution of the avian sex chromosomes from an ancestral pair of autosomes Proc. Natl. Acad. Sci. USA 95 1998 8147 8152
18. D.T. Gerrard, and D.A. Filatov Positive and negative selection on mammalian Y chromosomes Mol. Biol. Evol. 22 2005 1423 1432
19. R. Glas, J.A.M. Graves, R. Toder, M. Ferguson-Smith, and P.C. O'Brien Cross-species chromosome painting between human and marsupial directly demonstrates the ancient region of the mammalian X Mamm. Genome 10 1999 1115 1116
20. J.A.M. Graves The origin and function of the mammalian Y chromosome and Y-borne genes- an evolving understanding Bioessays 17 1995 311 320
21. J.A.M. Graves The rise and fall of SRY Trends Genet. 18 2002 259 264
22. J.A.M. Graves, and M.M. Schmidt Mammalian sex chromosomes - design or accident? Curr. Opin. Genet. Dev. 2 1992 890 901
23. J.A.M. Graves, and S. Shetty Sex from W to Z - evolution of vertebrate sex chromosomes and sex determining genes J. Exp. Zool. 281 2001 472 481
24. J.A. Graves, C.M. Disteche, and R. Toder Gene dosage in the evolution and function of mammalian sex chromosomes Cytogenet. Cell Genet. 80 1998 94 103
25. J.A.M. Graves, J. Gecz, and H. Hameister Evolution of the human X - a smart and sexy chromosome that controls speciation and development Cytogenet. Genome Res. 99 2002 141 145
26. F. Grützner, W. Rens, E. Tsend-Ayush, N. El-Mogharbel, P.C. O'Brien, and R.C. Jones In the platypus a meiotic chain of ten sex chromosomes shares genes with the bird Z and mammal X chromosomes Nature 432 2004 913 917
27. F. Grützner, T. Ashley, D.M. Rowell, and J.A.M. Graves How did the platypus get its sex chromosome chain? A comparison of meiotic multiples and sex chromosomes in plants and animals Chromosoma 2006 in press.
28. D. Hayman, and P. Sharp Verification of the structure of the complex sex chromosome system in Lagorchestes conspicillatus Gould (Marsupialia:Mammalia) Chromosoma 83 1981 263 274
29. E. Heard Recent advances in X-chromosome nactivation Curr. Opin. Cell Biol. 16 2004 247 255
30. H.E. Hoekstra, and S.V. Edwards Multiple origins of XY female mice (genus Akodon): phylogenetic and chromosomal evidence Proc. R. Soc. Lond. B. Biol. Sci. 267 2000 1825 1831
31. J.F. Hughes, H. Skaletsky, T. Pyntikova, P.J. Minx, T. Graves, S. Rozen, R.K. Wilson, and D.C. Page Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee Nature 437 2005 100 103
32. L.D. Hurst Embryonic growth and the evolution of the mammalilan Y chromosome. I. The Y as an attractor for selfish growth factors Heredity 73 1994 223 232
33. K. Jegalian, and D.C. Page A proposed path by which genes common to mammalian x and Y chromosomes evolve to become X inactivated Nature 394 1998 776 780
34. M.A. Jobling, and C. Tyler-Smith The human Y chromosome: an evolutionary marker comes of age Nat. Rev. Genet. 4 2003 598 612
35. W. Just, W. Rau, W. Vogel, M. Akhverdian, K. Fredga, J.A.M. Graves, and E. Lyapunova Absence of Sry in species of the vole Ellobius Nat. Genet. 11 1995 117 118
36. M. Kohn, H. Kehrer-Sawatzki, W. Vogel, J.A. Graves, and H. Hameister Wide genome comparisons reveal the origins of the human X chromosome Trends Genet. 20 2004 598 603
37. M. Kondo, I. Nanda, U. Hornung, M. Schmid, and M. Schartl Evolutionary origin of the medaka Y-chromosome Curr. Biol. 14 2004 1664 1669
38. B. Lahn, and D.C. Page Functional coherence of the human Y chromosome Science 278 1997 675 680
39. B.T. Lahn, and D.C. Page Four evolutionary strata on the human X chromosome Science 286 1999 965 967
40. B.T. Lahn, N.M. Pearson, and K. Jegalian The human Y chromosome, in the light of evolution Nat. Rev. Genet. 2 2001 207 216
41. F. Laumonnier, N. Ronce, B.C. Hamel, P. Thomas, J. Lespinasse, M. Raynaud, C. Paringaux, H. Van Bokhoven, V. Kalscheuer, and J.P. Fryns Transcription factor SOX3 is involved in X-linked mental retardation with growth hormone deficiency Am. J. Hum. Genet. 71 2002 1450 1455
42. K. Lindblad-Toh, C.M. Wade, T.S. Mikkelsen, E.K. Karlsson, D.B. Jaffe, M. Kamal, M. Clamp, J.L. Chang, E.J. Kulbokas 3rd, and M.C. Zody Genome sequence, comparative analysis and haplotype structure of the domestic dog Nature 438 2005 803 819
43. G. Marais, and N. Galtier Sex chromosomes: how X-Y recombination stops Curr. Biol. 13 2003 R641 R643
44. K.D. Makova, and W.H. Li Strong male-driven evolution of DNA sequences in humans and apes Nature 416 2002 624 626
45. J.R. McCarrey, and K. Thomas Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene Nature 326 1987 501 505
46. H.J. Muller A gene for the fourth chromosome of Drosophila J. Exp. Zool. 17 1914 325 336
47. I. Nanda, Z. Shan, M. Schartl, D.W. Burt, M. Koehler, H. Nothwang, F. Grutzner, I.R. Paton, D. Windsor, and I. Dunn 300 million years of conserved synteny between chicken Z and human chromosome 9 Nat. Genet. 21 1999 258 259
48. S. Ohno Sex Chromosomes and Sex Linked Genes 1967 Springer-Verlag New York
49. H.A. Orr, and J.A. Coyne The genetics of postzygotic isolation in Drosophila virilis group Genetics 121 1989 527 537
50. D.C. Page, R. Mosher, E.M. Simpson, E.M. Fisher, G. Mardon, J. Pollack, B. McGillivray, A. de la Chapelle, and L.G. Brown The sex-determining region of the human Y chromosome encodes a finger protein Cell 51 1987 1091 1104
51. D.J. Park, A.J. Pask, K. Huynh, V.R. Harley, M.B. Renfree, and J.A. Graves Characterisation of the marsupial-specific ATRY gene: Implication for the evolution of male-specific function Gene 362 2005 29 36
52. A.J. Pask, M.B. Renfree, and J.A.M. Graves The human sex-reversing ATRX gene has a homologue on the marsupial Y chromosome, ATRY: implications for the evolution of mammalian sex determination Proc. Natl. Acad. Sci. USA 97 2000 13198 13202
53. C.L. Peichel, J.A. Ross, C.K. Matson, M. Dickson, J. Grimwood, and J. Schmutz The master sex-determination locus in threespine sticklebacks is on a nascent Y chromosome Curr. Biol. 14 2004 1416 1424
54. Y. Qin, and C.E. Bishop Sox9 is sufficient for functional testis development producing fertile male mice in the absence of Sry Hum. Mol. Genet. 14 2005 1221 1229
55. V. Reinke Sex and the genome Nat. Genet. 36 2004 548 549
56. S. Repping, S.K. van Daalen, C.M. Korver, L.G. Brown, J.D. Marszalek, J. Gianotten, R.D. Oates, S. Silber, F. van der Veen, D.C. Page, and S.A. Rozen Family of human Y chromosomes has dispersed throughout northern Eurasia despite a 1.8-Mb deletion in azoospermia factor c region Genomics 83 2004 1046 1052
57. W.R. Rice The accumulation of sexually antagonistic genes as selective agent promoting the evolution of reduced recombination between primitive sex chromosomes Evolution Int. J. Org. Evolution 41 1987 911 914
58. W.R. Rice Genetic hitchhiking and the evolution of reduced genetic activity of the Y sex chromosome Genetics 116 1987 161 167
59. M.T. Ross, D.V. Grafham, A.J. Coffey, S. Scherer, K. McLay, and D. Muzny The DNA sequence of the human X chromosome Nature 434 2005 325 337
60. S. Rozen, H. Skaletsky, J.D. Marzalek, P.J. Minx, H.S. Cordum, R.H. Waterston, R.K. Wilson, and D.C. Page Abundant gene conversion between arms of palindromes in human and ape Y chromosomes Nature 423 2003 873 876
61. G.M. Saifi, and H.S. Chandra An apparent excess of sex- and reproduction-related genes on the human X chromosome Proc. R. Soc. Lond. B. Biol. Sci. 266 1999 203 209
62. S.D. Sarre, A. Georges, and A. Quinn The ends of a continuum: genetic and temperature-dependent sex determination in reptiles Bioessays 26 2004 639 645
63. R. Saxena, L.G. Brown, T. Hawkins, R.K. Alagappan, H. Skaletsky, M.P. Reeve, R. Reijo, S. Rozen, M.B. Dinulos, C.M. Disteche, and D.C. Page The DAZ gene cluster on the human Y chromosome arose from an autosomal gene that was transposed, repeatedly amplified and pruned Nat. Genet. 14 1996 292 299
64. S. Shetty, D.K. Griffin, and J.A.M. Graves Comparative painting reveals strong chromosome homology over 80 million years of bird evolution Chromosome Res. 7 1999 289 295
65. A.H. Sinclair, P. Berta, M.S. Palmer, J.R. Hawkins, B.L. Griffiths, M.J. Smith, J.W. Foster, A.M. Frischauf, R. Lovell-Badge, and P.N. Goodfellow A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif Nature 346 1990 240 244
66. H. Skaletsky, T. Kuroda-Kawaguchi, P.J. Minx, H.S. Cordum, L. Hillier, and L.G. Brown The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes Nature 423 2003 825 837
67. B. Sykes Adam's Curse. A Future Without Men 2003 Transworld Publishers London
68. A. Touré, E.J. Clemente, P. Ellis, S.K. Mahadevaiah, O.A. Ojarikre, P.A. Ball, L. Reynard, K.L. Loveland, P.S. Burgoyne, and N.A. Affara Identification of novel Y chromosome encoded transcripts by testis transcriptome analysis of mice with deletions of the Y chromosome long arm Genome Biol. 6 2005 R102
69. E. Tsend-Ayush, S.M.N. Onnebo, F. Grützner, M.L. Delbridge, R.S. Lewis, L.A. O'Sullivan, A.C. Ward, and J.A.M. Graves The RBMX gene is essential for brain development in zebrafish Dev. Dyn. 234 2005 682 688
70. W. Traut, and U. Willhoeft A jumping sex determining factor in the fly Megaselia scalaris Chromosoma (Berl.) 99 1990 407 412
71. F. Veyrunes, J. Catalan, B. Sicard, T.J. Robinson, J.M. Duplantier, and L. Granjon Autosome and sex chromosome diversity among the African pygmy mice, subgenus Nannomys (murinae; Mus) Chromosome Res. 12 2004 369 382
72. M.J. Wakefield, A.M. Keohane, B.M. Turner, and J.A.M. Graves Histone deacetylation is an ancient component of mammallian X chromosome inactivation Proc. Natl. Acad. Sci. USA 94 1997 9665 9668
73. P.J. Wang, J.R. Mccarrey, F. Yang, and D.C. Page An abundance of X-linked genes expressed in spermatogonia Nat. Genet. 27 2001 422 426
74. P. Waters, B. Duffy, C.J. Frost, M.L. Delbridge, and J.A.M. Graves The human Y chromosome derives largely from a single autosomal region added 80-130 million years ago Cytogenet. Cell Genet. 92 2001 74 79
75. C.M. Watson, S.H. Margan, and P.G. Johnston Sex chromosome elimination in the bandicoot Isoodon macrourus using Y-linked markers Cytogenet. Cell Genet. 81 1999 54 59
76. C.I. Wu, and E.Y. Xu Sexual antagonism and X inactivation - the SAXI hypothesis Trends Genet. 19 2003 243 247
77. U. Zechner, M. Wilda, H. Kehrer-Sawatzki, W. Vogel, R. Fundele, and H. Hameister A high density of X-linked genes for general cognitive ability: a run-away process shaping human evolution? Trends Genet. 17 2001 697 701