-
1
-
-
0037992395
-
The structure of DNA in the nucleosome core
-
Richmond, T. J.; Davey, C. A. The structure of DNA in the nucleosome core. Nature 2003, 423, 145-150.
-
(2003)
Nature
, vol.423
, pp. 145-150
-
-
Richmond, T.J.1
Davey, C.A.2
-
2
-
-
10944227347
-
NAD+- dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1
-
Kim, M. Y.; Mauro, S.; Gevry, N.; Lis, J. T.; Kraus, W. L. NAD+- dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1. Cell 2004, 119, 803-814.
-
(2004)
Cell
, vol.119
, pp. 803-814
-
-
Kim, M.Y.1
Mauro, S.2
Gevry, N.3
Lis, J.T.4
Kraus, W.L.5
-
3
-
-
0036532026
-
Histone modifications in transcriptional regulation
-
Berger, S. L. Histone modifications in transcriptional regulation. Curr. Opin. Genet. Dev. 2002, 12, 142-148.
-
(2002)
Curr. Opin. Genet. Dev
, vol.12
, pp. 142-148
-
-
Berger, S.L.1
-
4
-
-
0034912742
-
Histone acetyltransferases
-
Roth, S. Y.; Denu, J. M.; Allis, C. D. Histone acetyltransferases. Annu. Rev. Biochem. 2001, 70, 81-120.
-
(2001)
Annu. Rev. Biochem
, vol.70
, pp. 81-120
-
-
Roth, S.Y.1
Denu, J.M.2
Allis, C.D.3
-
5
-
-
34249828678
-
Small molecule modulators in epigenetics: Implications in gene expression and therapeutics
-
Swaminathan, V.; Reddy, B. A.; Ruthrotha Selvi, B.; Sukanya, M. S.; Kundu, T. K. Small molecule modulators in epigenetics: implications in gene expression and therapeutics. Subcell. Biochem. 2007, 41, 397-428.
-
(2007)
Subcell. Biochem
, vol.41
, pp. 397-428
-
-
Swaminathan, V.1
Reddy, B.A.2
Ruthrotha Selvi, B.3
Sukanya, M.S.4
Kundu, T.K.5
-
6
-
-
0035755974
-
Histone deacetylases and cancer: Causes and therapies
-
Marks, P. A.; Rifkind, R. A.; Richon, V. M.; Breslow, R.; Miller, T.; Kelly, W. K. Histone deacetylases and cancer: causes and therapies. Nat. Rev. Cancer 2001, 1, 194-202.
-
(2001)
Nat. Rev. Cancer
, vol.1
, pp. 194-202
-
-
Marks, P.A.1
Rifkind, R.A.2
Richon, V.M.3
Breslow, R.4
Miller, T.5
Kelly, W.K.6
-
7
-
-
0343417089
-
The p300/CBP family: Integrating signals with transcription factors and chromatin
-
Shikama, N.; Ivon, J.; La Thangue, N. The p300/CBP family: integrating signals with transcription factors and chromatin. Trends Cell Biol. 1997, 7, 230-236.
-
(1997)
Trends Cell Biol
, vol.7
, pp. 230-236
-
-
Shikama, N.1
Ivon, J.2
La Thangue, N.3
-
8
-
-
0035962650
-
Chromatin remodeling: Why it is important in cancer
-
Wolffe, A. P. Chromatin remodeling: Why it is important in cancer. Oncogene 2001, 20, 2988-2990.
-
(2001)
Oncogene
, vol.20
, pp. 2988-2990
-
-
Wolffe, A.P.1
-
9
-
-
0347624644
-
Critical loss of CBP/p300 histone acetylase activity by caspase-6 during neurodegeneration
-
Rouaux, C.; Jokic, N.; Mbebi, C.; Boutillier, S.; Loeffler, J. P.; Boutillier, A. L. Critical loss of CBP/p300 histone acetylase activity by caspase-6 during neurodegeneration. EMBO J. 2003, 22, 6537-6549.
-
(2003)
EMBO J
, vol.22
, pp. 6537-6549
-
-
Rouaux, C.1
Jokic, N.2
Mbebi, C.3
Boutillier, S.4
Loeffler, J.P.5
Boutillier, A.L.6
-
10
-
-
0030606239
-
The transcriptional coactivators p300 and CBP are histone acetyltransferases
-
Ogryzko, V. V.; Schiltz, R. L.; Russanova, V.; Howard, B. H.; Nakatani, Y. The transcriptional coactivators p300 and CBP are histone acetyltransferases. Cell 1996, 87, 953-959.
-
(1996)
Cell
, vol.87
, pp. 953-959
-
-
Ogryzko, V.V.1
Schiltz, R.L.2
Russanova, V.3
Howard, B.H.4
Nakatani, Y.5
-
11
-
-
0030480969
-
The CBP co-activator is a histone acetyltransferase
-
Bannister, A. J.; Kouzarides, T. The CBP co-activator is a histone acetyltransferase. Nature 1996, 384, 641-643.
-
(1996)
Nature
, vol.384
, pp. 641-643
-
-
Bannister, A.J.1
Kouzarides, T.2
-
12
-
-
0034234237
-
CBP/p300 in cell growth, transformation, and development
-
Goodman, R. H.; Smolik, S. CBP/p300 in cell growth, transformation, and development. Genes Dev. 2000, 14, 1553-1577.
-
(2000)
Genes Dev
, vol.14
, pp. 1553-1577
-
-
Goodman, R.H.1
Smolik, S.2
-
13
-
-
18244408596
-
DNA damage-dependent acetylation of p73 dictates the selective activation of apoptotic target genes
-
Costanzo, A.; Merlo, P.; Pediconi, N.; Fulco, M.; Sartorelli, V.; Cole, P. A.; Fontemaggi, G.; Fanciulli, M.; Schiltz, L.; Blandino, G.; Balsano, C.; Levrero, M. DNA damage-dependent acetylation of p73 dictates the selective activation of apoptotic target genes. Mol. Cell 2002, 9, 175-186.
-
(2002)
Mol. Cell
, vol.9
, pp. 175-186
-
-
Costanzo, A.1
Merlo, P.2
Pediconi, N.3
Fulco, M.4
Sartorelli, V.5
Cole, P.A.6
Fontemaggi, G.7
Fanciulli, M.8
Schiltz, L.9
Blandino, G.10
Balsano, C.11
Levrero, M.12
-
14
-
-
2942729543
-
Insulin regulation of hepatic gluconeogenesis through phosphorylation of CREB-binding protein
-
Zhou, X. Y.; Shibusawa, N.; Naik, K.; Porras, D.; Temple, K.; Ou, H.; Kaihara, K.; Roe, M. W.; Brady, M. J.; Wondisford, F. E. Insulin regulation of hepatic gluconeogenesis through phosphorylation of CREB-binding protein. Nat. Med. 2004, 10, 633-637.
-
(2004)
Nat. Med
, vol.10
, pp. 633-637
-
-
Zhou, X.Y.1
Shibusawa, N.2
Naik, K.3
Porras, D.4
Temple, K.5
Ou, H.6
Kaihara, K.7
Roe, M.W.8
Brady, M.J.9
Wondisford, F.E.10
-
15
-
-
33744736618
-
Chromatin modifications (acetylation/ deacetylation/methylation) as new targets for HIV therapy
-
Varier, R. A.; Kundu, T. K. Chromatin modifications (acetylation/ deacetylation/methylation) as new targets for HIV therapy. Curr. Pharm. Des. 2006, 12, 1975-1993.
-
(2006)
Curr. Pharm. Des
, vol.12
, pp. 1975-1993
-
-
Varier, R.A.1
Kundu, T.K.2
-
16
-
-
0035823497
-
Transcrip-tional coactivator protein p300. Kinetic characterization of its histone acetyltransferase activity
-
Thompson, P. R.; Kurooka, H.; Nakatani, Y.; Cole, P. A. Transcrip-tional coactivator protein p300. Kinetic characterization of its histone acetyltransferase activity. J. Biol. Chem. 2001, 276, 33721-33729.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 33721-33729
-
-
Thompson, P.R.1
Kurooka, H.2
Nakatani, Y.3
Cole, P.A.4
-
17
-
-
1842420646
-
Regulation of the p300 HAT domain via a novel activation loop
-
Thompson, P. R.; Wang, D.; Wang, L.; Fulco, M.; Pediconi, N.; Zhang, D.; An, W.; Ge, Q.; Roeder, R. G.; Wong, J.; Levrero, M.; Sartorelli, V.; Cotter, R. J.; Cole, P. A. Regulation of the p300 HAT domain via a novel activation loop. Nat. Struct. Mol. Biol. 2004, 11, 308-315.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 308-315
-
-
Thompson, P.R.1
Wang, D.2
Wang, L.3
Fulco, M.4
Pediconi, N.5
Zhang, D.6
An, W.7
Ge, Q.8
Roeder, R.G.9
Wong, J.10
Levrero, M.11
Sartorelli, V.12
Cotter, R.J.13
Cole, P.A.14
-
18
-
-
33846026402
-
Kinetic and mass spectrometric analysis of p300 histone acetyltransferase domain autoacetylation
-
Karanam, B.; Jiang, L.; Wang, L.; Kelleher, N. L.; Cole, P. A. Kinetic and mass spectrometric analysis of p300 histone acetyltransferase domain autoacetylation. J. Biol. Chem. 2006, 281, 40292-40301.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 40292-40301
-
-
Karanam, B.1
Jiang, L.2
Wang, L.3
Kelleher, N.L.4
Cole, P.A.5
-
19
-
-
39149109887
-
The structural basis of protein acetylation by the p300/CBP transcriptional coactivator
-
Liu, X.; Wang, L.; Zhao, K.; Thompson, P. R.; Hwang, Y.; Marmor-stein, R.; Cole, P. A. The structural basis of protein acetylation by the p300/CBP transcriptional coactivator. Nature 2008, 451, 846-850.
-
(2008)
Nature
, vol.451
, pp. 846-850
-
-
Liu, X.1
Wang, L.2
Zhao, K.3
Thompson, P.R.4
Hwang, Y.5
Marmor-stein, R.6
Cole, P.A.7
-
20
-
-
34447555884
-
Multiple roles for acetylation in the interaction of p300 HAT with ATF-2
-
Karanam, B.; Wang, L.; Wang, D.; Liu, X.; Marmorstein, R.; Cotter, R.; Cole, P. A. Multiple roles for acetylation in the interaction of p300 HAT with ATF-2. Biochemistry 2007, 46, 8207-8216.
-
(2007)
Biochemistry
, vol.46
, pp. 8207-8216
-
-
Karanam, B.1
Wang, L.2
Wang, D.3
Liu, X.4
Marmorstein, R.5
Cotter, R.6
Cole, P.A.7
-
21
-
-
33748415010
-
A mechanism for coordinating chromatin modification and preinitiation complex assembly
-
Black, J. C.; Choi, J. E.; Lombardo, S. R.; Carey, M. A mechanism for coordinating chromatin modification and preinitiation complex assembly. Mol. Cell 2006, 23, 809-818.
-
(2006)
Mol. Cell
, vol.23
, pp. 809-818
-
-
Black, J.C.1
Choi, J.E.2
Lombardo, S.R.3
Carey, M.4
-
22
-
-
35948947795
-
Autoacetylation induced specific structural changes in histone acetyltransferase domain of p300: Probed by surface enhanced Raman spectroscopy
-
Arif, M.; Kumar, G. V. P.; Narayana, C.; Kundu, T. K. Autoacetylation induced specific structural changes in histone acetyltransferase domain of p300: probed by surface enhanced Raman spectroscopy. J. Phys. Chem. B 2007, 111, 11877-11879.
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 11877-11879
-
-
Arif, M.1
Kumar, G.V.P.2
Narayana, C.3
Kundu, T.K.4
-
23
-
-
4043146501
-
Polyisoprenylated benzophenone, garcinol, a natural histone acetyltransferase inhibitor, represses chromatin transcription and alters global gene expression
-
Balasubramanyam, K.; Altaf, M.; Varier, R. A.; Swaminathan, V.; Ravindran, A.; Sadhale, P. P.; Kundu, T. K. Polyisoprenylated benzophenone, garcinol, a natural histone acetyltransferase inhibitor, represses chromatin transcription and alters global gene expression. J. Biol. Chem. 2004, 279, 33716-33726.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 33716-33726
-
-
Balasubramanyam, K.1
Altaf, M.2
Varier, R.A.3
Swaminathan, V.4
Ravindran, A.5
Sadhale, P.P.6
Kundu, T.K.7
-
24
-
-
34250308083
-
Specific inhibition of p300-HAT alters global gene expression and represses HIV replication
-
Mantelingu, K.; Reddy, B. A. A.; Swaminathan, V.; Kishore, A. H.; Siddappa, N. B.; Kumar, G. V. P.; Nagashankar, G.; Natesh, N.; Roy, S.; Sadhale, P. P.; Ranga, U.; Narayana, C.; Kundu, T. K. Specific inhibition of p300-HAT alters global gene expression and represses HIV replication. Chem. Biol. 2007, 14, 645-657.
-
(2007)
Chem. Biol
, vol.14
, pp. 645-657
-
-
Mantelingu, K.1
Reddy, B.A.A.2
Swaminathan, V.3
Kishore, A.H.4
Siddappa, N.B.5
Kumar, G.V.P.6
Nagashankar, G.7
Natesh, N.8
Roy, S.9
Sadhale, P.P.10
Ranga, U.11
Narayana, C.12
Kundu, T.K.13
-
25
-
-
0030614625
-
2+ complexes of chromomycin A3 and mithramycin with poly(dG-dC) × poly(dC-dG) and poly(dG) × poly(dC)
-
2+ complexes of chromomycin A3 and mithramycin with poly(dG-dC) × poly(dC-dG) and poly(dG) × poly(dC). Biochemistry 1997, 36, 2291-2299.
-
(1997)
Biochemistry
, vol.36
, pp. 2291-2299
-
-
Majee, S.1
Sen, R.2
Guha, S.3
Bhattacharya, D.4
Dasgupta, D.5
-
27
-
-
0033168714
-
Crystal structure of the histone acetyltransferase domain of the human PCAF transcriptional regulator bound to coenzyme A
-
Clements, A.; Rojas, J. R.; Trievel, R. C.; Wang, L.; Berger, S. L.; Marmorstein, R. Crystal structure of the histone acetyltransferase domain of the human PCAF transcriptional regulator bound to coenzyme A. EMBO J. 1999, 18, 3521-3532.
-
(1999)
EMBO J
, vol.18
, pp. 3521-3532
-
-
Clements, A.1
Rojas, J.R.2
Trievel, R.C.3
Wang, L.4
Berger, S.L.5
Marmorstein, R.6
-
28
-
-
0037195124
-
Structure of the GCN5 histone acetyltransferase bound to a bisubstrate inhibitor
-
Poux, A. N.; Cebrat, M.; Kim, C. M.; Cole, P. A.; Marmorstein, R. Structure of the GCN5 histone acetyltransferase bound to a bisubstrate inhibitor. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 14065-14070.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A
, vol.99
, pp. 14065-14070
-
-
Poux, A.N.1
Cebrat, M.2
Kim, C.M.3
Cole, P.A.4
Marmorstein, R.5
-
29
-
-
36749087548
-
-
Milne, J. C.; Lambert, P. D.; Schenk, S.; Carney, D. P.; Smith, J. J.; Gagne, D. J.; Jin, L.; Boss, O.; Perni, R. B.; Vu, C. B.; Bemis, J. E.; Xie, R.; Disch, J. S.; Ng, P. Y.; Nunes, J. J.; Lynch, A. V.; Yang, H.; Galonek, H.; Israelian, K.; Choy, W.; Iffland, A.; Lavu, S.; Medvedik, O.; Sinclair, D. A.; Olefsky, J. M.; Jirousek, M. R.; Elliott, P. J.; Westphal, C. H. Small molecule activators of SIRT1 as therapeutics for the treatment of type 2 diabetes. Nature 2007, 450, 712-716.
-
Milne, J. C.; Lambert, P. D.; Schenk, S.; Carney, D. P.; Smith, J. J.; Gagne, D. J.; Jin, L.; Boss, O.; Perni, R. B.; Vu, C. B.; Bemis, J. E.; Xie, R.; Disch, J. S.; Ng, P. Y.; Nunes, J. J.; Lynch, A. V.; Yang, H.; Galonek, H.; Israelian, K.; Choy, W.; Iffland, A.; Lavu, S.; Medvedik, O.; Sinclair, D. A.; Olefsky, J. M.; Jirousek, M. R.; Elliott, P. J.; Westphal, C. H. Small molecule activators of SIRT1 as therapeutics for the treatment of type 2 diabetes. Nature 2007, 450, 712-716.
-
-
-
-
30
-
-
64349085036
-
-
Frisch, M. J, Trucks, G. W, Schlegel, H. B, Scuseria, G. E, Robb, M. A, Cheeseman, J. R, Montgomery, J. A, Jr, Vreven, T, Kudin, K. N, Burant, J. C, Millam, J. M, Iyengar, S. S, Tomasi, J, Barone, V, Mennucci, B, Cossi, M, Scalmani, G, Rega, N, Petersson, G. A, Nakatsuji, H, Hada, M, Ehara, M, Toyota, K, Fukuda, R, Hasegawa, J, Ishida, M, Nakajima, T, Honda, Y, Kitao, O, Nakai, H, Klene, M, Li, X, Knox, J. E, Hratchian, H. P, Cross, J. B, Bakken, V, Adamo, C, Jaramillo, J, Gomperts, R, Stratmann, R. E, Yazyev, O, Austin, A. J, Cammi, R, Pomelli, C, Ochterski, J. W, Ayala, P. Y, Morokuma, K, Voth, G. A, Salvador, P, Dannenberg, J. J, Zakrzewski, V. G, Dapprich, S, Daniels, A. D, Strain, M. C, Farkas, O, Malick, D. K, Rabuck, A. D, Raghavachari, K, Foresman, J. B, Ortiz, J. V, Cui, Q, Baboul, A. G, Clifford, S, Cioslowski, J, Stefanov, B. B, Liu, G, Liashenko, A, Piskorz, P, Komaromi, I, Martin, R. L, Fox, D. J, Keit
-
Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. A., Jr.; Vreven, T.; Kudin, K. N.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li, X.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A. Gaussian 03, revision B.05; Gaussian, Inc.: Wallingford, CT, 2004.
-
-
-
-
31
-
-
21644460933
-
Docking essential dynamics eigenstruc-tures
-
Mustard, D.; Ritchie, D. W. Docking essential dynamics eigenstruc-tures. Proteins: Struct., Funct., Bioinf. 2005, 60, 269-274.
-
(2005)
Proteins: Struct., Funct., Bioinf
, vol.60
, pp. 269-274
-
-
Mustard, D.1
Ritchie, D.W.2
-
32
-
-
0030870910
-
The histone acetyltransferase activity of human GCN5 and PCAF is stabilized by coenzymes
-
Herrera, J. E.; Bergel, M.; Yang, X. J.; Nakatani, Y.; Bustin, M. The histone acetyltransferase activity of human GCN5 and PCAF is stabilized by coenzymes. J. Biol. Chem. 1997, 272, 27253-27258.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 27253-27258
-
-
Herrera, J.E.1
Bergel, M.2
Yang, X.J.3
Nakatani, Y.4
Bustin, M.5
-
33
-
-
34250376742
-
Selective inhibition of CBP/p300 HAT
-
Sarli, V.; Giannis, A. Selective inhibition of CBP/p300 HAT. Chem Biol. 2007, 6, 605-606.
-
(2007)
Chem Biol
, vol.6
, pp. 605-606
-
-
Sarli, V.1
Giannis, A.2
-
34
-
-
64349121181
-
-
DeLano Scientific LLC: Palo Alto, CA
-
DeLano, W. L. The PyMOL Molecular Graphics System; DeLano Scientific LLC: Palo Alto, CA, 2002; http://www.pymol.org.
-
(2002)
-
-
DeLano, W.L.1
-
35
-
-
34250817103
-
A new mixing of Hartree-Fock and local density-functional theories
-
(a) Becke, A. D. J. A new mixing of Hartree-Fock and local density-functional theories. Chem. Phys. 1993, 98, 1372-1377.
-
(1993)
Chem. Phys
, vol.98
, pp. 1372-1377
-
-
Becke, A.D.J.1
-
36
-
-
0345491105
-
Development of the Colle-Salvetti correlation- energy formula into a functional of the electron density
-
B3LYP
-
(b) Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti correlation- energy formula into a functional of the electron density. Phys. Rev.B 1998, 37, 785-789 (B3LYP).
-
(1998)
Phys. Rev.B
, vol.37
, pp. 785-789
-
-
Lee, C.1
Yang, W.2
Parr, R.G.3
-
37
-
-
64349085037
-
Interaction of the antitumor antibiotic chromomycin A3 with glutathione, a sulfhydryl agent, and the effect upon its DNA binding properties
-
Chakrabarty, S.; Roy, P.; Dasgupta, D. Interaction of the antitumor antibiotic chromomycin A3 with glutathione, a sulfhydryl agent, and the effect upon its DNA binding properties. Biochem. Pharmacol. 1998, 31, 3379-3386.
-
(1998)
Biochem. Pharmacol
, vol.31
, pp. 3379-3386
-
-
Chakrabarty, S.1
Roy, P.2
Dasgupta, D.3
-
38
-
-
0033635222
-
Activator-dependent transcription from chromatin in vitro involving targeted histone acetylation by p300
-
Kundu, T. K.; Palthan, V. B.; Wang, Z.; An, W.; Cole, P. A.; Roeder, R. G. Activator-dependent transcription from chromatin in vitro involving targeted histone acetylation by p300. Mol. Cell 2000, 6, 551-561.
-
(2000)
Mol. Cell
, vol.6
, pp. 551-561
-
-
Kundu, T.K.1
Palthan, V.B.2
Wang, Z.3
An, W.4
Cole, P.A.5
Roeder, R.G.6
|