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Volumn 52, Issue 2, 2005, Pages 90-94

Molecular approaches to the investigation of viable dinoflagellate cysts in natural sediments from estuarine environments

Author keywords

Anoxia; cDNA; Cytochrome; Delaware Inland Bays; Excystment; Germination; Harmful algal blooms; mRNA; Pfiesteria; RT PCR

Indexed keywords

AMPLIFICATION; ANOXIC CONDITIONS; COMPARATIVE STUDY; DINOFLAGELLATE; DINOFLAGELLATE CYST; DNA; ESTUARINE ENVIRONMENT; GENE EXPRESSION; LABORATORY METHOD; MOLECULAR ANALYSIS; RNA; SEDIMENT; VIABILITY;

EID: 21844446401     PISSN: 10665234     EISSN: 15507408     Source Type: Journal    
DOI: 10.1111/j.1550-7408.2005.05202001.x     Document Type: Conference Paper
Times cited : (27)

References (51)
  • 3
    • 0000605679 scopus 로고
    • Seeding of 2 red tide blooms by the germination of benthic Gonyaulax tamarensis hypnocysts
    • Anderson D. M. Morel F. M. M. 1979. Seeding of 2 red tide blooms by the germination of benthic Gonyaulax tamarensis hypnocysts. Estuar. Coast. Mar. Sci., 8 : 279 293.
    • (1979) Estuar. Coast. Mar. Sci. , vol.8 , pp. 279-293
    • Anderson, D.M.1    Morel, F.M.M.2
  • 4
    • 84980304669 scopus 로고
    • Potential importance of benthic cysts of Gonyaulax tamarensis and G. excavata in initiating toxic dinoflagellate blooms
    • Anderson D. M. Wall D. 1978. Potential importance of benthic cysts of Gonyaulax tamarensis and G. excavata in initiating toxic dinoflagellate blooms. J. Phycol., 14 : 224 234.
    • (1978) J. Phycol. , vol.14 , pp. 224-234
    • Anderson, D.M.1    Wall, D.2
  • 5
    • 84986769193 scopus 로고
    • The effects of darkness and anaerobiosis on dinoflagellate cyst germination
    • Anderson D. M. Taylor C. D. Armbrust E. V. 1987. The effects of darkness and anaerobiosis on dinoflagellate cyst germination. Limnol. Oceanogr., 32 : 340 351.
    • (1987) Limnol. Oceanogr. , vol.32 , pp. 340-351
    • Anderson, D.M.1    Taylor, C.D.2    Armbrust, E.V.3
  • 6
    • 0037448713 scopus 로고    scopus 로고
    • Formation of two types of cysts by a mixotrophic dinoflagellate, Pfiesteria piscicida
    • Anderson J. T. Stoecker D. K. Hood R. R. 2003. Formation of two types of cysts by a mixotrophic dinoflagellate, Pfiesteria piscicida. Mar. Ecol.-Prog. Ser., 246 : 95 104.
    • (2003) Mar. Ecol.-Prog. Ser. , vol.246 , pp. 95-104
    • Anderson, J.T.1    Stoecker, D.K.2    Hood, R.R.3
  • 7
    • 0028992466 scopus 로고
    • The distribution of dinoflagellate cysts along the Galician (NW Spain) coast
    • Blanco J. 1995. The distribution of dinoflagellate cysts along the Galician (NW Spain) coast. J. Plankton Res., 17 : 283 302.
    • (1995) J. Plankton Res. , vol.17 , pp. 283-302
    • Blanco, J.1
  • 9
    • 2642638790 scopus 로고    scopus 로고
    • Pfiesteria piscicida and other Pfiesteria-like dinoflagellates: Behavior, impacts, and environmental controls
    • Burkholder J. M. Glasgow H. B. 1997. Pfiesteria piscicida and other Pfiesteria-like dinoflagellates: behavior, impacts, and environmental controls. Limnol. Oceanogr., 42 : 1052 1075.
    • (1997) Limnol. Oceanogr. , vol.42 , pp. 1052-1075
    • Burkholder, J.M.1    Glasgow, H.B.2
  • 10
    • 0034860616 scopus 로고    scopus 로고
    • Overview and present status of the toxic Pfiesteria complex (Dinophyceae)
    • Burkholder J. M. Glasgow H. B. Deamer Melia N. 2001. Overview and present status of the toxic Pfiesteria complex (Dinophyceae). Phycologia, 40 : 186 214.
    • (2001) Phycologia , vol.40 , pp. 186-214
    • Burkholder, J.M.1    Glasgow, H.B.2    Deamer Melia, N.3
  • 11
    • 1242299551 scopus 로고    scopus 로고
    • The growing contributions of molecular biology and immunology to protistan ecology: Molecular signatures as ecological tools
    • Caron D. A. Countway P. D. Brown M. V. 2004. The growing contributions of molecular biology and immunology to protistan ecology: molecular signatures as ecological tools. J. Eukaryot. Microbiol., 51 : 38 48.
    • (2004) J. Eukaryot. Microbiol. , vol.51 , pp. 38-48
    • Caron, D.A.1    Countway, P.D.2    Brown, M.V.3
  • 12
    • 0033133476 scopus 로고    scopus 로고
    • Protistan community structure: Molecular approaches for answering ecological questions
    • Caron D. A. Gast R. J. Lim E. L. Dennett M. R. 1999. Protistan community structure: molecular approaches for answering ecological questions. Hydrobiologia, 401 : 215 227.
    • (1999) Hydrobiologia , vol.401 , pp. 215-227
    • Caron, D.A.1    Gast, R.J.2    Lim, E.L.3    Dennett, M.R.4
  • 13
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by guanidinium thiocyanate-phenol- chloroform extraction
    • Chomszynski P. Sacchi N. 1987. Single-step method of RNA isolation by guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem., 162 : 156 159.
    • (1987) Anal. Biochem. , vol.162 , pp. 156-159
    • Chomszynski, P.1    Sacchi, N.2
  • 14
    • 4644265619 scopus 로고    scopus 로고
    • A modified Serial Analysis of Gene Expression (SAGE) method for construction of gene expression profiles of microbial eukaryotic species
    • Coyne K. J. Burkholder J. M. Feldman R. A. Hutchins D. A. Cary S. C. 2004. A modified Serial Analysis of Gene Expression (SAGE) method for construction of gene expression profiles of microbial eukaryotic species. Appl. Environ. Microbiol., 70 : 5298 5304.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 5298-5304
    • Coyne, K.J.1    Burkholder, J.M.2    Feldman, R.A.3    Hutchins, D.A.4    Cary, S.C.5
  • 15
    • 0035908647 scopus 로고    scopus 로고
    • Assessing temporal and spatial variability in Pfiesteria piscicida distributions using molecular probing techniques
    • Coyne K. J. Hutchins D. A. Hare C. E. Cary S. C. 2001. Assessing temporal and spatial variability in Pfiesteria piscicida distributions using molecular probing techniques. Aquat. Microb. Ecol., 24 : 275 285.
    • (2001) Aquat. Microb. Ecol. , vol.24 , pp. 275-285
    • Coyne, K.J.1    Hutchins, D.A.2    Hare, C.E.3    Cary, S.C.4
  • 16
    • 0035831532 scopus 로고    scopus 로고
    • Effects of anoxia and the mitochondrion on expression of aerobic nuclear COX genes in yeast - Evidence for a signaling pathway from the mitochondrial genome to the nucleus
    • Dagsgaard C. Taylor L. E. O'Brien K. M. Poyton R. O. 2001. Effects of anoxia and the mitochondrion on expression of aerobic nuclear COX genes in yeast - evidence for a signaling pathway from the mitochondrial genome to the nucleus. J. Biol. Chem., 276 : 7593 7601.
    • (2001) J. Biol. Chem. , vol.276 , pp. 7593-7601
    • Dagsgaard, C.1    Taylor, L.E.2    O'Brien, K.M.3    Poyton, R.O.4
  • 18
    • 0035403492 scopus 로고    scopus 로고
    • Application of Denaturing Gradient Gel Electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques
    • Diez B. Pedros-Alio C. Marsh T. L. Massana R. 2001. Application of Denaturing Gradient Gel Electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques. Appl. Environ. Microbiol., 67 : 2942 2951.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2942-2951
    • Diez, B.1    Pedros-Alio, C.2    Marsh, T.L.3    Massana, R.4
  • 20
    • 0019495572 scopus 로고
    • Synthesis and turnover of mitochondrial ribonucleic-acid in Hela Cells - The mature ribosomal and messenger ribonucleic acid species are metabolically unstable
    • Gelfand R. Attardi G. 1981. Synthesis and turnover of mitochondrial ribonucleic-acid in Hela Cells - the mature ribosomal and messenger ribonucleic acid species are metabolically unstable. Mol. Cell. Biol., 1 : 497 511.
    • (1981) Mol. Cell. Biol. , vol.1 , pp. 497-511
    • Gelfand, R.1    Attardi, G.2
  • 21
    • 0242712822 scopus 로고    scopus 로고
    • PCR detection of dinoflagellate cysts in field sediment samples from tropic and temperate environments
    • Godhe A. Rehnstam-Holm A. S., Karunasagar I. Karunasagar I. 2002. PCR detection of dinoflagellate cysts in field sediment samples from tropic and temperate environments. Harmful Algae, 1 : 361 373.
    • (2002) Harmful Algae , vol.1 , pp. 361-373
    • Godhe, A.1    Rehnstam-Holm, A.S.2    Karunasagar, I.3    Karunasagar, I.4
  • 22
    • 0001914227 scopus 로고
    • Culturing of phytoplankton for feeding marine invertebrates
    • In: Smith, W. L. Chanley, M. H. (ed.), Plenum Publishing Co., New York. p.
    • Guillard R. R. L. 1975. Culturing of phytoplankton for feeding marine invertebrates. In : Smith W. L. Chanley M. H. (ed.), Culturing Marine Invertebrate Animals. Plenum Publishing Co., New York. p. 29 60.
    • (1975) Culturing Marine Invertebrate Animals. , pp. 29-60
    • Guillard, R.R.L.1
  • 23
    • 0027059406 scopus 로고
    • Transport of diatom and dinoflagellate resting spores in ships' ballast water - Implications for plankton biogeography and aquaculture
    • Hallegraeff G. M. Bolch C. J. 1992. Transport of diatom and dinoflagellate resting spores in ships' ballast water - implications for plankton biogeography and aquaculture. J. Plankton Res., 14 : 1067 1084.
    • (1992) J. Plankton Res. , vol.14 , pp. 1067-1084
    • Hallegraeff, G.M.1    Bolch, C.J.2
  • 25
    • 0034860910 scopus 로고    scopus 로고
    • Harmful dinoflagellate resting cysts in ships' ballast tank sediments: Potential for introduction into English and Welsh waters
    • Hamer J. P. Lucas I. A. N. McCollin T. A. 2001. Harmful dinoflagellate resting cysts in ships' ballast tank sediments: potential for introduction into English and Welsh waters. Phycologia, 40 : 246 255.
    • (2001) Phycologia , vol.40 , pp. 246-255
    • Hamer, J.P.1    Lucas, I.A.N.2    McCollin, T.A.3
  • 26
    • 0032053157 scopus 로고    scopus 로고
    • Quiescence in Artemia franciscana embryos: Reversible arrest of metabolism and gene expression at low oxygen levels
    • Hand S. C. 1998. Quiescence in Artemia franciscana embryos: reversible arrest of metabolism and gene expression at low oxygen levels. J. Exp. Biol., 201 : 1233 1242.
    • (1998) J. Exp. Biol. , vol.201 , pp. 1233-1242
    • Hand, S.C.1
  • 27
    • 0029936184 scopus 로고    scopus 로고
    • Profiles of nuclear and mitochondrial encoded mRNAs in developing and quiescent embryos of Artemia franciscana
    • Hardewig I. Anchordoguy T. J. Crawford D. L. Hand S. C. 1996. Profiles of nuclear and mitochondrial encoded mRNAs in developing and quiescent embryos of Artemia franciscana. Mol. Cell. Biochem., 158 : 139 147.
    • (1996) Mol. Cell. Biochem. , vol.158 , pp. 139-147
    • Hardewig, I.1    Anchordoguy, T.J.2    Crawford, D.L.3    Hand, S.C.4
  • 28
    • 0002432797 scopus 로고
    • The role of the cyst stage in the seasonal growth of the dinoflagellate Ceratium hirundinella within a small productive lake
    • Heaney S. I. Chapman D. V. Morison H. R. 1983. The role of the cyst stage in the seasonal growth of the dinoflagellate Ceratium hirundinella within a small productive lake. Br. Phycol. J., 18 : 47 59.
    • (1983) Br. Phycol. J. , vol.18 , pp. 47-59
    • Heaney, S.I.1    Chapman, D.V.2    Morison, H.R.3
  • 29
    • 0034751813 scopus 로고    scopus 로고
    • Mechanism, origin, and evolution of anoxia tolerance in animals
    • Hochachka P. W. Lutz P. L. 2001. Mechanism, origin, and evolution of anoxia tolerance in animals. Comp. Biochem. Phys. B, 130 : 435 459.
    • (2001) Comp. Biochem. Phys. B , vol.130 , pp. 435-459
    • Hochachka, P.W.1    Lutz, P.L.2
  • 30
    • 0029796904 scopus 로고    scopus 로고
    • Unifying theory of hypoxia tolerance: Molecular metabolic defense and rescue mechanisms for surviving oxygen lack
    • Hochachka P. W. Buck L. T. Doll C. J. Land S. C. 1996. Unifying theory of hypoxia tolerance: molecular metabolic defense and rescue mechanisms for surviving oxygen lack. Proc. Natl. Acad. Sci. USA, 93 : 9493 9498.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 9493-9498
    • Hochachka, P.W.1    Buck, L.T.2    Doll, C.J.3    Land, S.C.4
  • 31
    • 0028890050 scopus 로고
    • Viral contribution to dissolved DNA in the marine environment as determined by differential centrifugation and Kingdom probing
    • Jiang S. C. Paul J. H. 1995. Viral contribution to dissolved DNA in the marine environment as determined by differential centrifugation and Kingdom probing. Appl. Environ. Microbiol., 61 : 317 325.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 317-325
    • Jiang, S.C.1    Paul, J.H.2
  • 32
    • 0027084295 scopus 로고
    • Burial of living dinoflagellate cysts in estuarine and nearshore sediments
    • Keafer B. A. Buesseler K. O. Anderson D. M. 1992. Burial of living dinoflagellate cysts in estuarine and nearshore sediments. Mar. Micropaleontol., 20 : 147 161.
    • (1992) Mar. Micropaleontol. , vol.20 , pp. 147-161
    • Keafer, B.A.1    Buesseler, K.O.2    Anderson, D.M.3
  • 33
    • 0037164218 scopus 로고    scopus 로고
    • Role of cyst germination in the bloom initiation of Alexandrium tamarense (Dinophyceae) in Masan Bay, Korea
    • Kim Y. O. Park M. H. Han M. S. 2002. Role of cyst germination in the bloom initiation of Alexandrium tamarense (Dinophyceae) in Masan Bay, Korea. Aquat. Microb. Ecol., 29 : 279 286.
    • (2002) Aquat. Microb. Ecol. , vol.29 , pp. 279-286
    • Kim, Y.O.1    Park, M.H.2    Han, M.S.3
  • 34
    • 0033940702 scopus 로고    scopus 로고
    • Factors regulating germination of resting cysts of the spring bloom dinoflagellate Scrippsiella hangoei from the northern Baltic Sea
    • Kremp A. Anderson D. M. 2000. Factors regulating germination of resting cysts of the spring bloom dinoflagellate Scrippsiella hangoei from the northern Baltic Sea. J. Plankton Res., 22 : 1311 1327.
    • (2000) J. Plankton Res. , vol.22 , pp. 1311-1327
    • Kremp, A.1    Anderson, D.M.2
  • 35
    • 0036303481 scopus 로고    scopus 로고
    • Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates
    • Lin S. Zhang H. Spencer D. F. Norman J. E. Gray M. W. 2002. Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates. J. Mol. Biol., 320 : 727 739.
    • (2002) J. Mol. Biol. , vol.320 , pp. 727-739
    • Lin, S.1    Zhang, H.2    Spencer, D.F.3    Norman, J.E.4    Gray, M.W.5
  • 37
    • 0036098725 scopus 로고    scopus 로고
    • Viability of phytoplankton resting stages in the sediments of a coastal Swedish fjord
    • McQuoid M. R. Godhe A. Nordberg K. 2002. Viability of phytoplankton resting stages in the sediments of a coastal Swedish fjord. Eur. J. Phycol., 37 : 191 201.
    • (2002) Eur. J. Phycol. , vol.37 , pp. 191-201
    • McQuoid, M.R.1    Godhe, A.2    Nordberg, K.3
  • 38
    • 0024241467 scopus 로고
    • The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
    • Medlin L. Elwood H. J. Stickel S. Sogen M. L. 1988. The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene, 71 : 491 499.
    • (1988) Gene , vol.71 , pp. 491-499
    • Medlin, L.1    Elwood, H.J.2    Stickel, S.3    Sogen, M.L.4
  • 39
    • 0032700955 scopus 로고    scopus 로고
    • Different excystment patterns in two calcareous cyst-producing species of the dinoflagellate genus Scrippsiella
    • Nuzzo L. Montresor M. 1999. Different excystment patterns in two calcareous cyst-producing species of the dinoflagellate genus Scrippsiella. J. Plankton Res., 21 : 2009 2018.
    • (1999) J. Plankton Res. , vol.21 , pp. 2009-2018
    • Nuzzo, L.1    Montresor, M.2
  • 40
    • 0041402648 scopus 로고    scopus 로고
    • Estuarine heterotrophic cryptoperidiniopsoids (Dinophyceae): Life cycle and culture studies
    • Parrow M. W. Burkholder J. M. 2003. Estuarine heterotrophic cryptoperidiniopsoids (Dinophyceae): life cycle and culture studies. J. Phycol., 39 : 678 696.
    • (2003) J. Phycol. , vol.39 , pp. 678-696
    • Parrow, M.W.1    Burkholder, J.M.2
  • 41
    • 0031959596 scopus 로고    scopus 로고
    • Control of germination of Alexandrium tamarense (Dinophyceae) cysts from the lower St. Lawrence estuary (Canada)
    • Perez C. C. Roy S. Levasseur M. Anderson D. M. 1998. Control of germination of Alexandrium tamarense (Dinophyceae) cysts from the lower St. Lawrence estuary (Canada). J. Phycol., 34 : 242 249.
    • (1998) J. Phycol. , vol.34 , pp. 242-249
    • Perez, C.C.1    Roy, S.2    Levasseur, M.3    Anderson, D.M.4
  • 42
    • 2542462652 scopus 로고    scopus 로고
    • The use of quantitative polymerase chain reaction for the detection and enumeration of the harmful alga Aureococcus anophagefferens in environmental samples along the United States East Coast
    • Popels L. C. Forbes R. Pustizzi F. Gobler C. J. Cary S. C. Hutchins D. A. Coyne K. J. 2003. The use of quantitative polymerase chain reaction for the detection and enumeration of the harmful alga Aureococcus anophagefferens in environmental samples along the United States East Coast. Limnol. Oceanogr. Methods, 1 : 92 102.
    • (2003) Limnol. Oceanogr. Methods , vol.1 , pp. 92-102
    • Popels, L.C.1    Forbes, R.2    Pustizzi, F.3    Gobler, C.J.4    Cary, S.C.5    Hutchins, D.A.6    Coyne, K.J.7
  • 43
    • 0031686156 scopus 로고    scopus 로고
    • Environmental and endogenous regulation of cyst germination in two freshwater dinoflagellates
    • Rengefors K. Anderson D. M. 1998. Environmental and endogenous regulation of cyst germination in two freshwater dinoflagellates. J. Phycol., 34 : 568 577.
    • (1998) J. Phycol. , vol.34 , pp. 568-577
    • Rengefors, K.1    Anderson, D.M.2
  • 44
    • 0036734949 scopus 로고    scopus 로고
    • Iron-sulfur-phosphorus cycling in the sediments of a shallow coastal bay: Implications for sediment nutrient release and benthic macroalgal blooms
    • Rozan T. F. Taillefert M. Trouwborst R. E. Glazer B. T. Ma S. Herszage J. Valdes L. M. Price K. S. Luther G. W. 2002. Iron-sulfur-phosphorus cycling in the sediments of a shallow coastal bay: implications for sediment nutrient release and benthic macroalgal blooms. Limnol. Oceanogr., 47 : 1346 1354.
    • (2002) Limnol. Oceanogr. , vol.47 , pp. 1346-1354
    • Rozan, T.F.1    Taillefert, M.2    Trouwborst, R.E.3    Glazer, B.T.4    Ma, S.5    Herszage, J.6    Valdes, L.M.7    Price, K.S.8    Luther, G.W.9
  • 45
    • 0002936309 scopus 로고    scopus 로고
    • Development of nucleic acid probe-based diagnostics for identifying and enumerating harmful algal bloom species
    • In: Anderson, D. M. Cembella, A. D. Hallegraeff, G. M. (ed.), Springer-Verlag, Berlin.
    • Scholin C. A. 1998. Development of nucleic acid probe-based diagnostics for identifying and enumerating harmful algal bloom species. In : Anderson D. M. Cembella A. D. Hallegraeff G. M. (ed.), Physiological Ecology of Harmful Algal Blooms. Springer-Verlag, Berlin. G42 : 337 349.
    • (1998) Physiological Ecology of Harmful Algal Blooms. , vol.42 , pp. 337-349
    • Scholin, C.A.1
  • 46
    • 84950028079 scopus 로고
    • Implications of dinoflagellate life-cycles on initiation of Gymnodinium breve red tides
    • Steidinger K. A. 1975. Implications of dinoflagellate life-cycles on initiation of Gymnodinium breve red tides. Environ. Lett., 9 : 129 139.
    • (1975) Environ. Lett. , vol.9 , pp. 129-139
    • Steidinger, K.A.1
  • 47
    • 0442264154 scopus 로고    scopus 로고
    • Seasonal variations of soluble organic-Fe(III) in sediment porewaters as revealed by voltammetric microelectrodes
    • In: Taillefert, M. Rozan, T. F. (ed.), ACS Symposium Series 811. American Chemical Society: Washington, D.C., p.
    • Taillefert M. Rozan T. F. Glazer B. T. Herszage J. Trouwborst R. E. Luther G. W. 2002. Seasonal variations of soluble organic-Fe(III) in sediment porewaters as revealed by voltammetric microelectrodes. In : Taillefert M. Rozan T. F. (ed.), Analyses of Trace Elemental Biogeochemistry. ACS Symposium Series 811 American Chemical Society : Washington, D.C., p. 247 264.
    • (2002) Analyses of Trace Elemental Biogeochemistry. , pp. 247-264
    • Taillefert, M.1    Rozan, T.F.2    Glazer, B.T.3    Herszage, J.4    Trouwborst, R.E.5    Luther, G.W.6
  • 51
    • 0036151907 scopus 로고    scopus 로고
    • Detection and quantification of Pfiesteria piscicida by using the mitochondrial cytochrome b gene
    • Zhang H. Lin S. 2002. Detection and quantification of Pfiesteria piscicida by using the mitochondrial cytochrome b gene. Appl. Environ. Microbiol., 68 : 989 994.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 989-994
    • Zhang, H.1    Lin, S.2


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