-
1
-
-
2442686628
-
A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA
-
Andersen, T.E., Porse, B.T., and Kirpekar, F. 2004. A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA. RNA 10: 907-913.
-
(2004)
RNA
, vol.10
, pp. 907-913
-
-
Andersen, T.E.1
Porse, B.T.2
Kirpekar, F.3
-
2
-
-
20044365659
-
-
Banoub, J.H., Newton, R.P., Esmans, E., Ewing, D.F., and Mackenzie, G. 2005. Recent developments in mass spectrometry for the characterization of nucleosides, nucleotides, oligonucleotides, and nucleic acids. Chem. Rev. 105: 1869-1915.
-
Banoub, J.H., Newton, R.P., Esmans, E., Ewing, D.F., and Mackenzie, G. 2005. Recent developments in mass spectrometry for the characterization of nucleosides, nucleotides, oligonucleotides, and nucleic acids. Chem. Rev. 105: 1869-1915.
-
-
-
-
3
-
-
0001374853
-
Mass-spectrometric techniques in nucleic-acid research
-
Crain, P.F. 1990a. Mass-spectrometric techniques in nucleic-acid research. Mass Spectrom. Rev. 9: 505-554.
-
(1990)
Mass Spectrom. Rev
, vol.9
, pp. 505-554
-
-
Crain, P.F.1
-
4
-
-
0025683270
-
Preparation and enzymatic-hydrolysis of DNA and RNA for mass-spectrometry
-
Crain, P.F. 1990b. Preparation and enzymatic-hydrolysis of DNA and RNA for mass-spectrometry. Methods Enzymol. 193: 782-790.
-
(1990)
Methods Enzymol
, vol.193
, pp. 782-790
-
-
Crain, P.F.1
-
5
-
-
27544446607
-
Study of the mass spectrometric fragmentation of pseudouridine: Comparison of fragmentation data obtained by matrix-assisted laser desorption/ionisation postsource decay, electrospray ion trap multistage mass spectrometry, and by a method utilising electrospray quadrupole time-of-flight tandem mass spectrometry and in-source fragmentation
-
Dudley, E., Tuytten, R., Bond, A., Lemiere, F., Brenton, A.G., Esmans, E.L., and Newton, R.P. 2005. Study of the mass spectrometric fragmentation of pseudouridine: Comparison of fragmentation data obtained by matrix-assisted laser desorption/ionisation postsource decay, electrospray ion trap multistage mass spectrometry, and by a method utilising electrospray quadrupole time-of-flight tandem mass spectrometry and in-source fragmentation. Rapid Commun. Mass Spectrom. 19: 3075-3085.
-
(2005)
Rapid Commun. Mass Spectrom
, vol.19
, pp. 3075-3085
-
-
Dudley, E.1
Tuytten, R.2
Bond, A.3
Lemiere, F.4
Brenton, A.G.5
Esmans, E.L.6
Newton, R.P.7
-
6
-
-
41549163979
-
Translational regulation via L11: Molecular switches on the ribosome turned on and off by thiostrepton and micrococcin
-
Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M., and Fucini, P. 2008. Translational regulation via L11: Molecular switches on the ribosome turned on and off by thiostrepton and micrococcin. Mol. Cell 30: 26-38.
-
(2008)
Mol. Cell
, vol.30
, pp. 26-38
-
-
Harms, J.M.1
Wilson, D.N.2
Schluenzen, F.3
Connell, S.R.4
Stachelhaus, T.5
Zaborowska, Z.6
Spahn, C.M.7
Fucini, P.8
-
7
-
-
45749089015
-
Crystal structure of the oxazolidinone antibiotic linezolid bound to the 50S ribosomal subunit
-
Ippolito, J.A., Kanyo, Z.F., Wang, D., Franceschi, F.J., Moore, P.B., Steitz, T.A., and Duffy, E.M. 2008. Crystal structure of the oxazolidinone antibiotic linezolid bound to the 50S ribosomal subunit. J. Med. Chem. 51: 3353-3356.
-
(2008)
J. Med. Chem
, vol.51
, pp. 3353-3356
-
-
Ippolito, J.A.1
Kanyo, Z.F.2
Wang, D.3
Franceschi, F.J.4
Moore, P.B.5
Steitz, T.A.6
Duffy, E.M.7
-
8
-
-
33846638637
-
Collision-induced dissociation of cytidine and its derivatives
-
Jensen, S.S., Ariza, X., Nielsen, P., Vilarrasa, J., and Kirpekar, F. 2007. Collision-induced dissociation of cytidine and its derivatives. J. Mass Spectrom. 42: 49-57.
-
(2007)
J. Mass Spectrom
, vol.42
, pp. 49-57
-
-
Jensen, S.S.1
Ariza, X.2
Nielsen, P.3
Vilarrasa, J.4
Kirpekar, F.5
-
9
-
-
33746106088
-
Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O-methylations in 16S and 23S rRNAs
-
Johansen, S.K., Maus, C.E., Plikaytis, B.B., and Douthwaite, S. 2006. Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O-methylations in 16S and 23S rRNAs. Mol. Cell 23: 173-182.
-
(2006)
Mol. Cell
, vol.23
, pp. 173-182
-
-
Johansen, S.K.1
Maus, C.E.2
Plikaytis, B.B.3
Douthwaite, S.4
-
10
-
-
33645761164
-
Distribution of florfenicol resistance genes fexA and cfr among chloramphenicol-resistant Staphylococcus isolates
-
Kehrenberg, C. and Schwarz, S. 2006. Distribution of florfenicol resistance genes fexA and cfr among chloramphenicol-resistant Staphylococcus isolates. Antimicrob. Agents Chemother. 50: 1156-1163.
-
(2006)
Antimicrob. Agents Chemother
, vol.50
, pp. 1156-1163
-
-
Kehrenberg, C.1
Schwarz, S.2
-
11
-
-
23744453392
-
A new mechanism for chloramphenicol, florfenicol and clindamycin resistance: Methylation of 23S ribosomal RNA at A2503
-
Kehrenberg, C., Schwarz, S., Jacobsen, L., Hansen, L.H., and Vester, B. 2005. A new mechanism for chloramphenicol, florfenicol and clindamycin resistance: Methylation of 23S ribosomal RNA at A2503. Mol. Microbiol. 57: 1064-1073.
-
(2005)
Mol. Microbiol
, vol.57
, pp. 1064-1073
-
-
Kehrenberg, C.1
Schwarz, S.2
Jacobsen, L.3
Hansen, L.H.4
Vester, B.5
-
12
-
-
33846587425
-
IS21-558 insertion sequences are involved in the mobility of the multi-resistance gene cfr
-
Kehrenberg, C., Aarestrup, F.M., and Schwarz, S. 2007. IS21-558 insertion sequences are involved in the mobility of the multi-resistance gene cfr. Antimicrob. Agents Chemother. 51: 483-487.
-
(2007)
Antimicrob. Agents Chemother
, vol.51
, pp. 483-487
-
-
Kehrenberg, C.1
Aarestrup, F.M.2
Schwarz, S.3
-
13
-
-
0029026068
-
Post-transcriptional modification of the central loop of domain-V in Escherichia-coli 23-S ribosomal-RNA
-
Kowalak, J.A., Bruenger, E., and McCloskey, J.A. 1995. Post-transcriptional modification of the central loop of domain-V in Escherichia-coli 23-S ribosomal-RNA. J. Biol. Chem. 270: 17758-17764.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 17758-17764
-
-
Kowalak, J.A.1
Bruenger, E.2
McCloskey, J.A.3
-
14
-
-
0034864362
-
Retention characteristics of porous graphitic carbon in reversed-phase liquid chromatography with methanol-water mobile phases
-
Lepont, C., Gunatillaka, A.D., and Poole, C.F. 2001. Retention characteristics of porous graphitic carbon in reversed-phase liquid chromatography with methanol-water mobile phases. Analyst (Lond.) 126: 1318-1325.
-
(2001)
Analyst (Lond.)
, vol.126
, pp. 1318-1325
-
-
Lepont, C.1
Gunatillaka, A.D.2
Poole, C.F.3
-
15
-
-
33745599646
-
The Cfr rRNA methyltransferase confers resistance to phenicols, lincosamides, oxazolidinones, pleuromutilins, and streptograrnin A antibiotics
-
Long, K.S., Poehlsgaard, J., Kehrenberg, C., Schwarz, S., and Vester, B. 2006. The Cfr rRNA methyltransferase confers resistance to phenicols, lincosamides, oxazolidinones, pleuromutilins, and streptograrnin A antibiotics. Antimicrob. Agents Chemother. 50: 2500-2505.
-
(2006)
Antimicrob. Agents Chemother
, vol.50
, pp. 2500-2505
-
-
Long, K.S.1
Poehlsgaard, J.2
Kehrenberg, C.3
Schwarz, S.4
Vester, B.5
-
16
-
-
44449125584
-
First report of cfr-mediated resistance to linezolid in human staphylococcal clinical isolates recovered in the United States
-
Mendes, R.E., Deshpande, L.M., Castanheira, M., DiPersio, J., Saubolle, M.A., and Jones, R.N. 2008. First report of cfr-mediated resistance to linezolid in human staphylococcal clinical isolates recovered in the United States. Antimicrob. Agents Chemother. 52: 2244-2246.
-
(2008)
Antimicrob. Agents Chemother
, vol.52
, pp. 2244-2246
-
-
Mendes, R.E.1
Deshpande, L.M.2
Castanheira, M.3
DiPersio, J.4
Saubolle, M.A.5
Jones, R.N.6
-
17
-
-
0026773531
-
Collision-induced dissociation of adenine
-
Nelson, C.C. and McCloskey, J.A. 1992. Collision-induced dissociation of adenine. J. Am. Chem. Soc. 114: 3661-3668.
-
(1992)
J. Am. Chem. Soc
, vol.114
, pp. 3661-3668
-
-
Nelson, C.C.1
McCloskey, J.A.2
-
18
-
-
0012299172
-
Collision-induced dissociation of uracil and its derivatives
-
Nelson, C.C. and McCloskey, J.A. 1994. Collision-induced dissociation of uracil and its derivatives. J. Am. Soc. Mass Spectrom. 5: 339-349.
-
(1994)
J. Am. Soc. Mass Spectrom
, vol.5
, pp. 339-349
-
-
Nelson, C.C.1
McCloskey, J.A.2
-
19
-
-
45849084256
-
Porous graphitic carbon as a stationary phase in HPLC: Theory and applications
-
Pereira, L. 2008. Porous graphitic carbon as a stationary phase in HPLC: Theory and applications. J. Liquid Chromatogr. Relat. Technol. 31: 1687-1731.
-
(2008)
J. Liquid Chromatogr. Relat. Technol
, vol.31
, pp. 1687-1731
-
-
Pereira, L.1
-
20
-
-
28744453387
-
HPLC of some polar compounds on a porous graphitized carbon Hypercarb (TM) column
-
Polyakova, Y. and Row, K.H. 2005. HPLC of some polar compounds on a porous graphitized carbon Hypercarb (TM) column. J. Liquid Chromatogr. Relat. Technol. 28: 3157-3168.
-
(2005)
J. Liquid Chromatogr. Relat. Technol
, vol.28
, pp. 3157-3168
-
-
Polyakova, Y.1
Row, K.H.2
-
21
-
-
0025612935
-
Analysis of RNA hydrolyzates by liquid-chromatography mass-spectrometry
-
Pomerantz, S.C. and McCloskey, J.A. 1990. Analysis of RNA hydrolyzates by liquid-chromatography mass-spectrometry. Methods Enzymol. 193: 796-824.
-
(1990)
Methods Enzymol
, vol.193
, pp. 796-824
-
-
Pomerantz, S.C.1
McCloskey, J.A.2
-
22
-
-
35448966889
-
Ammonia elimination from protonated nucleobases and related synthetic substrates
-
Qian, M., Yang, S., Wu, H., Majumdar, P., Leigh, N., and Glaser, R. 2007. Ammonia elimination from protonated nucleobases and related synthetic substrates. J. Am. Soc. Mass Spectrom. 18: 2040-2057.
-
(2007)
J. Am. Soc. Mass Spectrom
, vol.18
, pp. 2040-2057
-
-
Qian, M.1
Yang, S.2
Wu, H.3
Majumdar, P.4
Leigh, N.5
Glaser, R.6
-
23
-
-
9644281855
-
Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with tiamulin
-
Schlunzen, F., Pyetan, E., Fucini, P., Yonath, A., and Harms, J.M. 2004. Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with tiamulin. Mol. Microbiol. 54: 1287-1294.
-
(2004)
Mol. Microbiol
, vol.54
, pp. 1287-1294
-
-
Schlunzen, F.1
Pyetan, E.2
Fucini, P.3
Yonath, A.4
Harms, J.M.5
-
24
-
-
0035950132
-
Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria
-
Schlunzen, F., Zarivach, R., Harms, J., Bashan, A., Tocilj, A., Albrecht, R., Yonath, A., and Franceschi, F. 2001. Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria. Nature 413: 814-821.
-
(2001)
Nature
, vol.413
, pp. 814-821
-
-
Schlunzen, F.1
Zarivach, R.2
Harms, J.3
Bashan, A.4
Tocilj, A.5
Albrecht, R.6
Yonath, A.7
Franceschi, F.8
-
25
-
-
0033840457
-
Identification of a plasmid-borne chloramphenicol-florfenicol resistance gene in Staphylococcus sciuri
-
Schwarz, S., Werckenthin, C., and Kehrenberg, C. 2000. Identification of a plasmid-borne chloramphenicol-florfenicol resistance gene in Staphylococcus sciuri. Antimicrob. Agents Chemother. 44: 2530-2533.
-
(2000)
Antimicrob. Agents Chemother
, vol.44
, pp. 2530-2533
-
-
Schwarz, S.1
Werckenthin, C.2
Kehrenberg, C.3
-
26
-
-
0035282866
-
Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: Functional characterization using new analysis and information visualization methods
-
Sofia, H.J., Chen, G., Hetzler, B.G., Reyes-Spindola, J.F., and Miller, N.E. 2001. Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: Functional characterization using new analysis and information visualization methods. Nucleic Acids Res. 29: 1097-1106.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 1097-1106
-
-
Sofia, H.J.1
Chen, G.2
Hetzler, B.G.3
Reyes-Spindola, J.F.4
Miller, N.E.5
-
27
-
-
45649083395
-
An indigenous posttranscriptional modification in the ribosomal peptidyl transferase center confers resistance to an array of protein synthesis inhibitors
-
Toh, S.M. and Mankin, A.S. 2008. An indigenous posttranscriptional modification in the ribosomal peptidyl transferase center confers resistance to an array of protein synthesis inhibitors. J. Mol. Biol. 380: 593-597.
-
(2008)
J. Mol. Biol
, vol.380
, pp. 593-597
-
-
Toh, S.M.1
Mankin, A.S.2
-
28
-
-
34250028674
-
Acquisition of a natural resistance gene renders a clinical strain of methicillin-resistant Staphylococcus aureus resistant to the synthetic antibiotic linezolid
-
Toh, S.M., Xiong, L.Q., Arias, C.A., Villegas, M.V., Lolans, K., Quinn, J., and Mankin, A.S. 2007. Acquisition of a natural resistance gene renders a clinical strain of methicillin-resistant Staphylococcus aureus resistant to the synthetic antibiotic linezolid. Mol. Microbiol. 64: 1506-1514.
-
(2007)
Mol. Microbiol
, vol.64
, pp. 1506-1514
-
-
Toh, S.M.1
Xiong, L.Q.2
Arias, C.A.3
Villegas, M.V.4
Lolans, K.5
Quinn, J.6
Mankin, A.S.7
-
29
-
-
38049060422
-
The methyltransferase YfgB/RlmN is responsible for modification of adenosine 2503 in 23S rRNA
-
Toh, S.M., Xiong, L.Q., Bae, T., and Mankin, A.S. 2008. The methyltransferase YfgB/RlmN is responsible for modification of adenosine 2503 in 23S rRNA. RNA 14: 98-106.
-
(2008)
RNA
, vol.14
, pp. 98-106
-
-
Toh, S.M.1
Xiong, L.Q.2
Bae, T.3
Mankin, A.S.4
-
30
-
-
25144492004
-
Protonated adenine: Tautomers, solvated clusters, and dissociation mechanisms
-
Tureček, F. and Chen, X.H. 2005. Protonated adenine: Tautomers, solvated clusters, and dissociation mechanisms. J. Am. Soc. Mass Spectrom. 16: 1713-1726.
-
(2005)
J. Am. Soc. Mass Spectrom
, vol.16
, pp. 1713-1726
-
-
Tureček, F.1
Chen, X.H.2
-
31
-
-
0027431083
-
Antiviral activity of C-alkylated purine nucleosides obtained by cross-coupling with tetraalkyltin reagents
-
Van Aerschot, A.A., Mamos, P., Weyns, N.J., Ikeda, S., De Clercq, E., and Herdewijn, P.A. 1993. Antiviral activity of C-alkylated purine nucleosides obtained by cross-coupling with tetraalkyltin reagents. J. Med. Chem. 36: 2938-2942.
-
(1993)
J. Med. Chem
, vol.36
, pp. 2938-2942
-
-
Van Aerschot, A.A.1
Mamos, P.2
Weyns, N.J.3
Ikeda, S.4
De Clercq, E.5
Herdewijn, P.A.6
-
32
-
-
51649117099
-
The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning
-
Wilson, D.N., Schluenzen, F., Harms, J.M., Starosta, A.L., Connell, S.R., and Fucini, P. 2008. The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning. Proc. Natl. Acad. Sci. 105: 13339-13344.
-
(2008)
Proc. Natl. Acad. Sci
, vol.105
, pp. 13339-13344
-
-
Wilson, D.N.1
Schluenzen, F.2
Harms, J.M.3
Starosta, A.L.4
Connell, S.R.5
Fucini, P.6
-
33
-
-
0016838666
-
Chemical ionization mass-spectrometry of nucleosides. Mechanisms of ion formation and estimations of proton affinity
-
Wilson, M.S. and McCloskey, J.A. 1975. Chemical ionization mass-spectrometry of nucleosides. Mechanisms of ion formation and estimations of proton affinity. J. Am. Chem. Soc. 97: 3436-3444.
-
(1975)
J. Am. Chem. Soc
, vol.97
, pp. 3436-3444
-
-
Wilson, M.S.1
McCloskey, J.A.2
-
34
-
-
3142753383
-
Liquid chromatographic analysis of nucleosides and their mono-, di-, and triphosphates using porous graphitic carbon stationary phase coupled with electrospray mass spectrometry
-
Xing, J.S., Apedo, A., Tymiak, A., and Zhao, N. 2004. Liquid chromatographic analysis of nucleosides and their mono-, di-, and triphosphates using porous graphitic carbon stationary phase coupled with electrospray mass spectrometry. Rapid Commun. Mass Spectrom. 18: 1599-1606.
-
(2004)
Rapid Commun. Mass Spectrom
, vol.18
, pp. 1599-1606
-
-
Xing, J.S.1
Apedo, A.2
Tymiak, A.3
Zhao, N.4
|