Spectral analysis of multiplex Raman probe signatures

ACS Nano

Volumn 2, Issue 11, 2008, Pages 2306-2314

  Lutz, Barry R ^a   Dentinger, Claire E ^a   Nguyen, Lienchi N ^a   Sun, Lei ^a   Zhang, Jingwu ^a   Allen, April N ^b   Chan, Selena ^a   Knudsen, Beatrice S ^b  

^a INTEL CORPORATION   (United States)

^b Fred Hutchinson Cancer Research Center   (United States)

Author keywords

Composite organic inorganic nanoparticles (COINs); Cytokeratin 18; Multiplex assays; Prostate specific antigen; Surface enhanced Raman scattering (SERS); Tissue imaging

Indexed keywords

ANTIGENS; ASSAYS; EMISSION SPECTROSCOPY; FORMALDEHYDE; NANOPARTICLES; NUCLEIC ACIDS; ORGANIC ACIDS; RAMAN SCATTERING; SIGNAL PROCESSING; SPECTRUM ANALYSIS; SPECTRUM ANALYZERS; TISSUE;

ASSAY SYSTEMS; BINDING ASSAYS; COMPOSITE ORGANIC-INORGANIC NANOPARTICLES (COINS); CONVENTIONAL ANALYSIS METHODS; CYTOKERATIN-18; DETECTION LIMITS; EX-VIVO; FORMALIN; HUMAN PROSTATES; IN-VIVO; MULTIPLEX ANALYSIS; MULTIPLEX ASSAYS; NANOPARTICLE PROBES; NEW CLASSES; OPTICAL LABELS; OVERLAPPING PEAKS; PATHOLOGICAL PROCESSES; PROBE SIGNALS; PROSTATE-SPECIFIC ANTIGEN; RAMAN PROBES; ROC CURVES; SMALL SIGNALS; SPATIAL RESOLUTION.; SPECTRAL ANALYSES; SPECTRAL ANALYSIS METHODS; SPECTRAL FITTINGS; SPECTRAL SIGNATURES; THROUGHPUT ANALYSES; TISSUE AUTOFLUORESCENCE;

MULTIPLEXING;

CYTOKERATIN 18; FLUORESCENT DYE; FORMALDEHYDE; NANOPARTICLE; PARAFFIN; PROSTATE SPECIFIC ANTIGEN;

ARTICLE; AUTOMATION; BIOASSAY; CHEMISTRY; HUMAN; MALE; METABOLISM; METHODOLOGY; NANOTECHNOLOGY; OPTICS; PROSTATE TUMOR; RAMAN SPECTROMETRY; REGRESSION ANALYSIS;

AUTOMATION; BIOLOGICAL ASSAY; FLUORESCENT DYES; FORMALDEHYDE; HUMANS; KERATIN-18; MALE; NANOPARTICLES; NANOTECHNOLOGY; OPTICS AND PHOTONICS; PARAFFIN; PROSTATE-SPECIFIC ANTIGEN; PROSTATIC NEOPLASMS; REGRESSION ANALYSIS; SPECTRUM ANALYSIS, RAMAN;

EID: 58049208432     PISSN: 19360851     EISSN: 1936086X     Source Type: Journal    
DOI: 10.1021/nn800243g     Document Type: Article

References (36)

1. Fleischmann, M.; Hendra, P. J.; McQuillan, A. J. Raman-Spectra of Pyridine Adsorbed at a Silver Electrode. Chem. Phys. Lett. 1974, 26, 163-166.
2. Albrecht, M. G.; Creighton, J. A. Anomalously Intense Raman-Spectra of Pyridine at a Silver Electrode. J. Am. Chem. Soc. 1977, 99, 5215-5217.
3. Jeanmaire, D. L.; Vanduyne, R. P. Surface Raman Spectroelectrochemistry. 1. Heterocyclic, Aromatic, and Aliphatic-Amines Adsorbed on Anodized Silver Electrode. J. Electroanal. Chem. 1977, 84, 1-20.
4. Moskovits, M. Surface-Enhanced Spectroscopy. Rev. Mod. Phys. 1985, 57, 783-826.
5. Kneipp, K.; Wang, Y.; Kneipp, H.; Perelman, L. T.; Itzkan, I.; Dasari, R.; Feld, M. S. Single Molecule Detection Using Surface-Enhanced Raman Scattering (SERS). Phys. Rev. Lett. 1997, 78, 1667-1670.
6. Nie, S. M.; Emery, S. R. Probing Single Molecules and Single Nanoparticles by Surface-Enhanced Raman Scattering. Science 1997, 275, 1102-1106.
7. Su, X.; Zhang, J.; Sun, L.; Koo, T. W.; Chan, S.; Sundararajan, N.; Yamakawa, M.; Berlin, A. A. Composite Organic-Inorganic Nanoparticles (COINs) with Chemically Encoded Optical Signatures. Nano Lett. 2005, 5, 49-54.
8. Sun, L.; Sung, K.-B.; Dentinger, C.; Lutz, B.; Nguyen, L.; Zhang, J.; Qin, H.; Yamakawa, M.; Cao, M.; Lu, Y.; et al. Composite Organic-Inorganic Nanoparticles as Raman Labels for Tissue Analysis. Nano Lett. 2007, 7, 351-356.
9. Grubisha, D. S.; Lipert, R. J.; Park, H. Y.; Driskell, J.; Porter, M. D. Femtomolar Detection of Prostate-Specific Antigen: An Immunoassay Based on Surface-Enhanced Raman Scattering and Immunogold Labels. Anal Chem. 2003, 75, 5936-5943.
10. Ni, J.; Lipert, R. J.; Dawson, G. B.; Porter, M. D. Immunoassay Readout Method Using Extrinsic Raman Labels Adsorbed on Immunogold Colloids. Anal. Chem. 1999, 71, 4903-4908.
11. Driskell, J. D.; Kwarta, K. M.; Lipert, R. J.; Porter, M. D.; Neill, J. D.; Ridpath, J. F. Low-Level Detection of Viral Pathogens by a Surface-Enhanced Raman Scattering Based Immunoassay. Anal Chem. 2005, 77, 6147-6154.
12. Cui, Y.; Ren, B.; Yao, J. L.; Gu, R. A.; Tian, Z. Q. Multianalyte Immunoassay Based on Surface-Enhanced Raman Spectroscopy. J. Raman Spectrosc. 2007, 38, 896-902.
13. Lutz, B.; Dentinger, C.; Sun, L.; Nguyen, L.; Zhang, J.; Chmura, A. J.; Allen, A.; Chan, S.; Knudsen, B. Raman Nanoparticle Probes for Antibody-Based Protein Detection in Tissues. J. Histochem. Cytochem. 2008, 56, 371-379.
14. Monaghan, P. B.; McCarney, K. M.; Ricketts, A.; Littleford, R. E.; Docherty, F.; Smith, W. E.; Graham, D.; Cooper, J. M. Bead-Based DNA Diagnostic Assay for Chlamydia Using Nanoparticle-Mediated Surface-Enhanced Resonance Raman Scattering Detection within a Lab-on-a-Chip Format. Anal Chem. 2007, 79, 2844-2849.
15. Faulds, K.; Smith, W. E.; Graham, D. Evaluation of Surface-Enhanced Resonance Raman Scattering for Quantitative DNA Analysis. Anal. Chem. 2004, 76, 412-417.
16. Park, T.; Lee, S.; Seong, G. H.; Choo, J.; Lee, E. K.; Kim, Y. S.; Ji, W. H.; Hwang, S. Y.; Gweon, D. G.; Lee, S. Highly Sensitive Signal Detection of Duplex Dye-Labelled DNA Oligonucleotides in a PDMS Microfluidic Chip: Confocal Surface-Enhanced Raman Spectroscopic Study. Lab Chip 2005, 5, 437-442.
17. Cao, Y. W. C.; Jin, R. C.; Mirkin, C. A. Nanoparticles with Raman Spectroscopic Fingerprints for DNA and RNA Detection. Science 2002, 297, 1536-1540.
18. Stokes, R. J.; Macaskill, A.; Lundahl, P. J., Smith, W. E.; Faulds, K.; Graham, D. Quantitative Enhanced Raman Scattering of Labeled DNA from Gold and Silver Nanoparticles. Small 2007, 3, 1593-1601.
19. Faulds, K.; McKenzie, F.; Smith, W. E.; Graham, D. Quantitative Simultaneous Multianalyte Detection of DNA by Dual-Wavelength Surface-Enhanced Resonance Raman Scattering. Angew. Chem., Int. Ed. 2007, 46, 1829-1831.
20. Cao, Y. C.; Jin, R. C.; Nato, J. M.; Thaxton, C. S.; Mirkin, C. A. Raman Dye-Labeled Nanoparticle Probes for Proteins. J. Am. Chem. Soc. 2003, 125, 14676-14677.
21. Bonham, A. J.; Braun, G.; Pavel, I.; Moskovits, M.; Reich, N. O. Detection of Sequence-Specific Protein- DNA Interactions via Surface Enhanced Resonance Raman Scattering. J. Am. Chem. Soc. 2007, 129, 14572-14573.
22. Lee, S.; Kim, S.; Choo, J.; Shin, S. Y.; Lee, Y. H.; Choi, H. Y.; Ha, S. H.; Kang, K. H.; Oh, C. H. Biological Imaging of HEK293 Cells Expressing PLC Gamma 1 Using Surface-Enhanced Raman Microscopy. Anal Chem. 2007, 79, 916-922.
23. Huang, X. H.; El-Sayed, I. H.; Qian, W.; El-Sayed, M. A. Cancer Cells Assemble and Align Gold Nanorods Conjugated to Antibodies to Produce Highly Enhanced, Sharp, and Polarized Surface Raman Spectra: A Potential Cancer Diagnostic Marker. Nano Lett. 2007, 7, 1591-1597.
24. Schlucker, S.; Kustner, B.; Punge, A.; Bonfig, R.; Marx, A.; Strobel, P. Immuno-Raman Microspectroscopy: In Situ Detection of Antigens in Tissue Specimens by Surface-Enhanced Raman Scattering. J. Raman Spectrosc. 2006, 37, 719-721.
25. Yu, K. N.; Lee, S.-M.; Han, J. Y.; Park, H.; Woo, M.-A.; Noh, M. S.; Hwang, S.-K.; Kwon, J.-T.; Jin, H.; Kim, Y.-K.; et al. Multiplex Targeting, Tracking, and Imaging of Apoptosis by Fluorescent Surface Enhanced Raman Spectroscopic Dots. Bioconjugate Chem. 2007, 18, 1155-1162.
26. Kim, J.-H.; Kim, J.-S.; Choi, H.; Lee, S.-M.; Jun, B.-H.; Yu, K.-N.; Kuk, E.; Kim, Y.-K.; Jeong, D. H.; Cho, M.-H.; Lee, Y.-S. Nanoparticle Probes with Surface Enhanced Raman Spectroscopic Tags for Cellular Cancer Targeting. Anal Chem. 2006, 78, 6967-6973.
27. Qian, X. M.; Peng, X.-H.; Ansari, D. O.; Yin-Goen, Q.; Chen, G. Z.; Shin, D. M.; Yang, L.; Young, A. N.; Wang, M. D.; Nie, S. In vivo Tumor Targeting and Spectroscopic Detection with Surface-Enhanced Raman Nanoparticle Tags. Nat. Biotechnol. 2008, 26, 83-90.
28. Faulds, K.; Barbagallo, R. P.; Keer, J. T.; Smith, W. E.; Graham, D. SERRS as a More Sensitive Technique for the Detection of Labelled Oligonucleotides Compared to Fluorescence. Analyst 2004, 129, 567-568.
29. Levenson, R. M.; Mansfield, J. R. Multispectral Imaging in Biology and Medicine: Slices of Life. Cytometry A 2006, 69A, 748-758.
30. Doering, W. E.; Piotti, M. E.; Natan, M. J.; Freeman, R. G. SERS as a Foundation for Nanoscale, Optically Detected Biological Labels. Adv. Mater. 2007, 19, 3100-3108.
31. Hanlon, E. B.; Manoharan, R.; Koo, T. W.; Shafer, K. E.; Motz, J. T.; Fitzmaurice, M.; Kramer, J. R.; Itzkan, I.; Dasari, R. R.; Feld, M. S. Prospects for in vivo Raman Spectroscopy. Phys. Med. Biol. 2000, 45, R1-R59.
32. McCabe, A. F.; Eliasson, C., Prasath, R. A.; Hernandez-Santana, A.; Stevenson, L.; Apple, I.; Cormack, P. A. G.; Graham, D.; Smith, W. E.; Corish, P.; et al SERRS Labelled Beads for Multiplex Detection. Faraday Discuss. 2006, 132, 303-308.
33. Watson, D. A.; Brown, L. O.; Gaskill, D. R.; Naivar, M.; Graves, S. W.; Doorn, S. K.; Nolan, J. P. A Flow Cytometer for the Measurement of Raman Spectra. Cytometry A 2008, 73A, 119-128.
34. Mulvaney, S. P.; Musick, M. D.; Keating, C. D.; Natan, M. J. Glass-Coated, Analyte-Tagged Nanoparticles: A New Tagging System Based on Detection with Surface-Enhanced Raman Scattering. Langmuir 2003, 19, 4784-4790.
35. Schwartzberg, A. M.; Olson, T. Y.; Talley, C. E.; Zhang, J. Z. Synthesis, Characterization, and Tunable Optical Properties of Hollow Gold Nanospheres. J. Phys. Chem. B 2006, 110, 19935-19944.
36. Cunningham, D.; Littleford, R. E.; Smith, W. E., Lundahl, P. J.; Khan, I.; McComb, D. W.; Graham, D.; Laforest, N. Practical Control of SERRS Enhancement. Faraday Discuss. 2006, 132, 135-145.