-
1
-
-
34547100313
-
Structure and function of DnaA N-terminal domain: Specific sites and mechanisms in inter-DnaA interaction and DnaB helicase loading on oriC
-
Abe, Y., Jo, T., Matsuda, Y., Matsunaga, C., Katayama, T. & Ueda, T. (2007). Structure and function of DnaA N-terminal domain: specific sites and mechanisms in inter-DnaA interaction and DnaB helicase loading on oriC. J Biol Chem 282, 17816-17827.
-
(2007)
J Biol Chem
, vol.282
, pp. 17816-17827
-
-
Abe, Y.1
Jo, T.2
Matsuda, Y.3
Matsunaga, C.4
Katayama, T.5
Ueda, T.6
-
2
-
-
0024284091
-
Duplex opening by DnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome
-
Bramhill, D. & Kornberg, A. (1988). Duplex opening by DnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell 52, 743-755.
-
(1988)
Cell
, vol.52
, pp. 743-755
-
-
Bramhill, D.1
Kornberg, A.2
-
3
-
-
6544229829
-
A study of the conditions and mechanism of the diphenylamine reaction for the colorimetric estimation of deoxyribonucleic acids
-
Burton, K. (1956). A study of the conditions and mechanism of the diphenylamine reaction for the colorimetric estimation of deoxyribonucleic acids. Biochem J 62, 315-322.
-
(1956)
Biochem J
, vol.62
, pp. 315-322
-
-
Burton, K.1
-
4
-
-
0018956590
-
Analysis of gene control signals by DNA fusion and cloning in Escherichia coli
-
Casadaban, M. J. & Cohen, S. N. (1980). Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. J Mol Biol 138, 179-207.
-
(1980)
J Mol Biol
, vol.138
, pp. 179-207
-
-
Casadaban, M.J.1
Cohen, S.N.2
-
5
-
-
0021346918
-
Protein HU in the enzymatic replication of the chromosomal origin of Escherichia coli
-
Dixon, N. E. & Kornberg, A. (1984). Protein HU in the enzymatic replication of the chromosomal origin of Escherichia coli. Proc Natl Acad Sci U S A 81, 424-428.
-
(1984)
Proc Natl Acad Sci U S A
, vol.81
, pp. 424-428
-
-
Dixon, N.E.1
Kornberg, A.2
-
6
-
-
0020536519
-
Proteins required for ultraviolet light and chemical mutagenesis: Identification of the products of the umuC locus of Escherichia coli
-
Elledge, S. J. & Walker, G. C. (1983). Proteins required for ultraviolet light and chemical mutagenesis: identification of the products of the umuC locus of Escherichia coli. J Mol Biol 164, 175-192.
-
(1983)
J Mol Biol
, vol.164
, pp. 175-192
-
-
Elledge, S.J.1
Walker, G.C.2
-
7
-
-
0037119995
-
The structure of bacterial DnaA: Implications for general mechanisms underlying DNA replication initiation
-
Erzberger, J. P., Pirruccello, M. M. & Berger, J. M. (2002). The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation. EMBO J 21, 4765-4773.
-
(2002)
EMBO J
, vol.21
, pp. 4765-4773
-
-
Erzberger, J.P.1
Pirruccello, M.M.2
Berger, J.M.3
-
8
-
-
33746860263
-
Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling
-
Erzberger, J. P., Mott, M. L. & Berger, J. M. (2006). Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling. Nat Struct Mol Biol 13, 676-683.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 676-683
-
-
Erzberger, J.P.1
Mott, M.L.2
Berger, J.M.3
-
9
-
-
0038476181
-
Structural basis of replication origin recognition by the DnaA protein
-
Fujikawa, N., Kurumizaka, H., Nureki, O., Terada, T., Shirouzu, M., Katayama, T. & Yokoyama, S. (2003). Structural basis of replication origin recognition by the DnaA protein. Nucleic Acids Res 31, 2077-2086.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2077-2086
-
-
Fujikawa, N.1
Kurumizaka, H.2
Nureki, O.3
Terada, T.4
Shirouzu, M.5
Katayama, T.6
Yokoyama, S.7
-
10
-
-
8544240894
-
DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication
-
Ishida, T., Akimitsu, N., Kashioka, T., Hatano, M., Kubota, T., Ogata, Y., Sekimizu, K. & Katayama, T. (2004). DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication. J Biol Chem 279, 45546-45555.
-
(2004)
J Biol Chem
, vol.279
, pp. 45546-45555
-
-
Ishida, T.1
Akimitsu, N.2
Kashioka, T.3
Hatano, M.4
Kubota, T.5
Ogata, Y.6
Sekimizu, K.7
Katayama, T.8
-
11
-
-
33750312968
-
DnaA: Controlling the initiation of bacterial DNA replication and more
-
Kaguni, J. M. (2006). DnaA: controlling the initiation of bacterial DNA replication and more. Annu Rev Microbiol 60, 351-375.
-
(2006)
Annu Rev Microbiol
, vol.60
, pp. 351-375
-
-
Kaguni, J.M.1
-
12
-
-
0032504050
-
The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase
-
Katayama, T., Kubota, T., Kurokawa, K., Crooke, F., & Sekimizu, K. (1998). The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase. Cell 94, 61-71.
-
(1998)
Cell
, vol.94
, pp. 61-71
-
-
Katayama, T.1
Kubota, T.2
Kurokawa, K.3
Crooke, F.4
Sekimizu, K.5
-
13
-
-
22844437103
-
Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family
-
Kawakami, H., Keyamura, K. & Katayama, T. (2005). Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family. J Biol Chem 280, 27420-27430.
-
(2005)
J Biol Chem
, vol.280
, pp. 27420-27430
-
-
Kawakami, H.1
Keyamura, K.2
Katayama, T.3
-
14
-
-
0030003443
-
A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome
-
Kitagawa, R., Mitsuki, H., Okazaki, T. & Ogawa, T. (1996). A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome. Mol Microbiol 19, 1137-1147.
-
(1996)
Mol Microbiol
, vol.19
, pp. 1137-1147
-
-
Kitagawa, R.1
Mitsuki, H.2
Okazaki, T.3
Ogawa, T.4
-
15
-
-
0032190630
-
Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein
-
Kitagawa, R., Ozaki, T., Moriya, S. & Ogawa, T. (1998). Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein. Genes Dev 12, 3032-3043.
-
(1998)
Genes Dev
, vol.12
, pp. 3032-3043
-
-
Kitagawa, R.1
Ozaki, T.2
Moriya, S.3
Ogawa, T.4
-
16
-
-
0033485526
-
Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli
-
Kurokawa, K., Nishida, S., Emoto, A., Sekimizu, K. & Katayama, T. (1999). Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli. EMBO J 18, 6642-6652.
-
(1999)
EMBO J
, vol.18
, pp. 6642-6652
-
-
Kurokawa, K.1
Nishida, S.2
Emoto, A.3
Sekimizu, K.4
Katayama, T.5
-
17
-
-
14544286823
-
Building a bacterial orisome: Emergence of new regulatory features for replication origin unwinding
-
Leonard, A. C. & Grimwade, J. E. (2005). Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding. Mol Microbiol 55, 978-985.
-
(2005)
Mol Microbiol
, vol.55
, pp. 978-985
-
-
Leonard, A.C.1
Grimwade, J.E.2
-
18
-
-
0024402876
-
The DnaA protein determines the initiation mass of Escherichia coli K-12
-
Løbner-Olesen, A., Skarstad, K., Hansen, F. G., von Meyenburg, K. & Boye, E. (1989). The DnaA protein determines the initiation mass of Escherichia coli K-12. Cell 57, 881-889.
-
(1989)
Cell
, vol.57
, pp. 881-889
-
-
Løbner-Olesen, A.1
Skarstad, K.2
Hansen, F.G.3
von Meyenburg, K.4
Boye, E.5
-
19
-
-
36448954249
-
NMR structure of the N-terminal domain of the replication initiator protein DnaA
-
Lowery, T. J., Pelton, J. G., Chandonia, J. M., Kim, R., Yokota, H. & Wemmer, D. E. (2007). NMR structure of the N-terminal domain of the replication initiator protein DnaA. J Struct Funct Genomics 8, 11-17.
-
(2007)
J Struct Funct Genomics
, vol.8
, pp. 11-17
-
-
Lowery, T.J.1
Pelton, J.G.2
Chandonia, J.M.3
Kim, R.4
Yokota, H.5
Wemmer, D.E.6
-
20
-
-
0028219947
-
SeqA: A negative modulator of replication initiation in E. coli
-
Lu, M., Campbell, J. L., Boye, E. & Kleckner, N. (1994). SeqA: a negative modulator of replication initiation in E. coli. Cell 77, 413-426.
-
(1994)
Cell
, vol.77
, pp. 413-426
-
-
Lu, M.1
Campbell, J.L.2
Boye, E.3
Kleckner, N.4
-
21
-
-
1542297764
-
Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP
-
McGarry, K. C., Ryan, V. T., Grimwade, J. E. & Leonard, A. C. (2004). Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP. Proc Natl Acad Sci U S A 101, 2811-2816.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 2811-2816
-
-
McGarry, K.C.1
Ryan, V.T.2
Grimwade, J.E.3
Leonard, A.C.4
-
22
-
-
0036843139
-
The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
-
Messer, W. (2002). The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication. FEMS Microbiol Rev 26, 355-374.
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 355-374
-
-
Messer, W.1
-
23
-
-
0032736348
-
Functional domains of DnaA proteins
-
Messer, W., Blaesing, F., Majka, J., Nardmann, J., Schaper, S., Schmidt, A., Seitz, H., Speck, C., Tüngler, C. & other authors (1999). Functional domains of DnaA proteins. Biochimie 81, 819-825.
-
(1999)
Biochimie
, vol.81
, pp. 819-825
-
-
Messer, W.1
Blaesing, F.2
Majka, J.3
Nardmann, J.4
Schaper, S.5
Schmidt, A.6
Seitz, H.7
Speck, C.8
Tüngler, C.9
-
24
-
-
34247271405
-
DNA replication initiation: Mechanisms and regulation in bacteria
-
Mott, M. L. & Berger, J. M. (2007). DNA replication initiation: mechanisms and regulation in bacteria. Nat Rev Microbiol 5, 343-354.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 343-354
-
-
Mott, M.L.1
Berger, J.M.2
-
26
-
-
0030894736
-
Prediction of the structure of the replication initiator protein DnaA
-
Schaper, S. & Messer, W. (1997). Prediction of the structure of the replication initiator protein DnaA. Proteins 28, 1-9.
-
(1997)
Proteins
, vol.28
, pp. 1-9
-
-
Schaper, S.1
Messer, W.2
-
27
-
-
0033812649
-
The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli
-
Seitz, H., Weigel, C. & Messer, W. (2000). The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli. Mol Microbiol 37, 1270-1279.
-
(2000)
Mol Microbiol
, vol.37
, pp. 1270-1279
-
-
Seitz, H.1
Weigel, C.2
Messer, W.3
-
28
-
-
0042665854
-
DnaA protein of Escherichia coli: Oligomerization at the E. coli chromosomal origin is required for initiation and involves Specific N-terminal amino acids
-
Simmons, L. A., Felczak, M. & Kaguni, J. M., (2003). DnaA protein of Escherichia coli: oligomerization at the E. coli chromosomal origin is required for initiation and involves Specific N-terminal amino acids. Mol Microbiol 49, 849-858.
-
(2003)
Mol Microbiol
, vol.49
, pp. 849-858
-
-
Simmons, L.A.1
Felczak, M.2
Kaguni, J.M.3
-
29
-
-
0032545466
-
Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin
-
Sutton, M. D., Carr, K. M., Vicente, M. & Kaguni, J. M. (1998). Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin. J Biol Chem 273, 34255-34262.
-
(1998)
J Biol Chem
, vol.273
, pp. 34255-34262
-
-
Sutton, M.D.1
Carr, K.M.2
Vicente, M.3
Kaguni, J.M.4
-
30
-
-
0032844522
-
The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA
-
Weigel, C., Schmidt, A., Seitz, H., Tungler, D., Welzeck, M. & Messer, W. (1999). The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA. Mol Microbiol 34, 53-66.
-
(1999)
Mol Microbiol
, vol.34
, pp. 53-66
-
-
Weigel, C.1
Schmidt, A.2
Seitz, H.3
Tungler, D.4
Welzeck, M.5
Messer, W.6
-
31
-
-
23444443648
-
The initiation mass for DNA replication in Escherichia coli K-12 is dependent on growth rate
-
Wold, S., Skarstad, K., Steen, H. B. Stokke, T. & Boye, E. (1994). The initiation mass for DNA replication in Escherichia coli K-12 is dependent on growth rate. EMBO J 13, 2097-2102.
-
(1994)
EMBO J
, vol.13
, pp. 2097-2102
-
-
Wold, S.1
Skarstad, K.2
Steen, H.B.3
Stokke, T.4
Boye, E.5
-
32
-
-
0018294470
-
Control of the initiation of DNA replication in Escherichia coli. II. Function of the dnaA product
-
Zahn, G. & Messer, W. (1979). Control of the initiation of DNA replication in Escherichia coli. II. Function of the dnaA product. Mol Gen Genet 168, 197-209.
-
(1979)
Mol Gen Genet
, vol.168
, pp. 197-209
-
-
Zahn, G.1
Messer, W.2
-
33
-
-
22544464417
-
Architecture of bacterial replication initiation complexes: Orisomes from four unrelated bacteria
-
Zawilak-Pawlik, A., Kois, A., Majka, J., Jakimowicz, D. Smulczyk-Krawczyszyn, A., Messer, W. & Zakrzewska-Czerwińska, J. (2005). Architecture of bacterial replication initiation complexes: orisomes from four unrelated bacteria. Biochem J 389, 471-481.
-
(2005)
Biochem J
, vol.389
, pp. 471-481
-
-
Zawilak-Pawlik, A.1
Kois, A.2
Majka, J.3
Jakimowicz, D.4
Smulczyk-Krawczyszyn, A.5
Messer, W.6
Zakrzewska-Czerwińska, J.7
|