-
1
-
-
27544445683
-
The DNA damage response during DNA replication
-
Branzei D, Foiani M. The DNA damage response during DNA replication. Curr Opin Cell Biol 2005; 17:568-75.
-
(2005)
Curr Opin Cell Biol
, vol.17
, pp. 568-575
-
-
Branzei, D.1
Foiani, M.2
-
2
-
-
21244464796
-
The RAD6 pathway: Control of DNA damage bypass and mutagenesis by ubiquitin and SUMO
-
Ulrich HD. The RAD6 pathway: control of DNA damage bypass and mutagenesis by ubiquitin and SUMO. Chembiochem 2005; 6:1735-43.
-
(2005)
Chembiochem
, vol.6
, pp. 1735-1743
-
-
Ulrich, H.D.1
-
3
-
-
2942649047
-
How to activate a damage-tolerant polymerase: Consequences of PCNA modifications by ubiquitin and SUMO
-
Ulrich HD. How to activate a damage-tolerant polymerase: consequences of PCNA modifications by ubiquitin and SUMO. Cell Cycle 2004; 3:15-8.
-
(2004)
Cell Cycle
, vol.3
, pp. 15-18
-
-
Ulrich, H.D.1
-
4
-
-
21244506437
-
Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function
-
Prakash S, Johnson RE, Prakash L. Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function. Annu Rev Biochem 2005; 74:317-53.
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 317-353
-
-
Prakash, S.1
Johnson, R.E.2
Prakash, L.3
-
5
-
-
36749069564
-
Conservation of DNA damage tolerance pathways from yeast to humans
-
Ulrich HD. Conservation of DNA damage tolerance pathways from yeast to humans. Biochem Soc Trans 2007; 35:1334-7.
-
(2007)
Biochem Soc Trans
, vol.35
, pp. 1334-1337
-
-
Ulrich, H.D.1
-
6
-
-
0037068455
-
RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO
-
Hoege C, Pfander B, Moldovan GL, Pyrowolakis G, Jentsch S. RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO. Nature 2002; 419:135-41.
-
(2002)
Nature
, vol.419
, pp. 135-141
-
-
Hoege, C.1
Pfander, B.2
Moldovan, G.L.3
Pyrowolakis, G.4
Jentsch, S.5
-
7
-
-
0141831006
-
Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation
-
Stelter P, Ulrich HD. Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation. Nature 2003; 425:188-91.
-
(2003)
Nature
, vol.425
, pp. 188-191
-
-
Stelter, P.1
Ulrich, H.D.2
-
8
-
-
2442417331
-
Interaction of human DNA polymerase eta with monoubiquitinated PCNA: A possible mechanism for the polymerase switch in response to DNA damage
-
Kannouche PL, Wing J, Lehmann AR. Interaction of human DNA polymerase eta with monoubiquitinated PCNA: a possible mechanism for the polymerase switch in response to DNA damage. Mol Cell 2004; 14:491-500.
-
(2004)
Mol Cell
, vol.14
, pp. 491-500
-
-
Kannouche, P.L.1
Wing, J.2
Lehmann, A.R.3
-
9
-
-
6344288785
-
Rad18 guides poleta to replication stalling sites through physical interaction and PCNA monoubiquitination
-
Watanabe K, Tateishi S, Kawasuji M, Tsurimoto T, Inoue H, Yamaizumi M. Rad18 guides poleta to replication stalling sites through physical interaction and PCNA monoubiquitination. EMBO J 2004; 23:3886-96.
-
(2004)
EMBO J
, vol.23
, pp. 3886-3896
-
-
Watanabe, K.1
Tateishi, S.2
Kawasuji, M.3
Tsurimoto, T.4
Inoue, H.5
Yamaizumi, M.6
-
10
-
-
29144499065
-
Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis
-
Bienko M, Green CM, Crosetto N, Rudolf F, Zapart G, Coull B, Kannouche P, Wider G, Peter M, Lehmann AR, Hofmann K, Dikic I. Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis. Science 2005; 310:1821-4.
-
(2005)
Science
, vol.310
, pp. 1821-1824
-
-
Bienko, M.1
Green, C.M.2
Crosetto, N.3
Rudolf, F.4
Zapart, G.5
Coull, B.6
Kannouche, P.7
Wider, G.8
Peter, M.9
Lehmann, A.R.10
Hofmann, K.11
Dikic, I.12
-
11
-
-
33745581677
-
Controlling the subcellular localization of DNA polymerases iota and eta via interactions with ubiquitin
-
Plosky BS, Vidal AE, Fernandez de Henestrosa AR, McLenigan MP, McDonald JP, Mead S, Woodgate R. Controlling the subcellular localization of DNA polymerases iota and eta via interactions with ubiquitin. EMBO J 2006; 25:2847-55.
-
(2006)
EMBO J
, vol.25
, pp. 2847-2855
-
-
Plosky, B.S.1
Vidal, A.E.2
Fernandez de Henestrosa, A.R.3
McLenigan, M.P.4
McDonald, J.P.5
Mead, S.6
Woodgate, R.7
-
12
-
-
33845223494
-
Ubiquitin-binding motifs in REV1 protein are required for its role in the tolerance of DNA damage
-
Guo C, Tang TS, Bienko M, Parker JL, Bielen AB, Sonoda E, Takeda S, Ulrich HD, Dikic I, Friedberg EC. Ubiquitin-binding motifs in REV1 protein are required for its role in the tolerance of DNA damage. Mol Cell Biol 2006; 26:8892-900.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 8892-8900
-
-
Guo, C.1
Tang, T.S.2
Bienko, M.3
Parker, J.L.4
Bielen, A.B.5
Sonoda, E.6
Takeda, S.7
Ulrich, H.D.8
Dikic, I.9
Friedberg, E.C.10
-
13
-
-
33746591796
-
Lysine 63-polyubiquitination guards against translesion synthesis-induced mutations
-
Chiu RK, Brun J, Ramaekers C, Theys J, Weng L, Lambin P, Gray DA, Wouters BG. Lysine 63-polyubiquitination guards against translesion synthesis-induced mutations. PLoS Genet 2006; 2:116.
-
(2006)
PLoS Genet
, vol.2
, pp. 116
-
-
Chiu, R.K.1
Brun, J.2
Ramaekers, C.3
Theys, J.4
Weng, L.5
Lambin, P.6
Gray, D.A.7
Wouters, B.G.8
-
14
-
-
40649097306
-
Activation of ubiquitin-dependent DNA damage bypass is mediated by Replication Protein A
-
Davies AA, Huttner D, Daigaku Y, Chen S, Ulrich HD. Activation of ubiquitin-dependent DNA damage bypass is mediated by Replication Protein A. Mol Cell 2008; 29:625-36.
-
(2008)
Mol Cell
, vol.29
, pp. 625-636
-
-
Davies, A.A.1
Huttner, D.2
Daigaku, Y.3
Chen, S.4
Ulrich, H.D.5
-
15
-
-
33845959940
-
Monoubiquitination of proliferating cell nuclear antigen induced by stalled replication requires uncoupling of DNA polymerase and mini-chromosome maintenance helicase activities
-
Chang DJ, Lupardus PJ, Cimprich KA. Monoubiquitination of proliferating cell nuclear antigen induced by stalled replication requires uncoupling of DNA polymerase and mini-chromosome maintenance helicase activities. J Biol Chem 2006; 281:32081-8.
-
(2006)
J Biol Chem
, vol.281
, pp. 32081-32088
-
-
Chang, D.J.1
Lupardus, P.J.2
Cimprich, K.A.3
-
17
-
-
29444454665
-
Ubiquitinated proliferating cell nuclear antigen activates translesion DNA polymerases eta and REV1
-
Garg P, Burgers PM. Ubiquitinated proliferating cell nuclear antigen activates translesion DNA polymerases eta and REV1. Proc Natl Acad Sci USA 2005; 102:18361-6.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 18361-18366
-
-
Garg, P.1
Burgers, P.M.2
-
18
-
-
33646234739
-
Rad18 regulates DNA polymerase kappa and is required for recovery from S-phase checkpoint-mediated arrest
-
Bi X, Barkley LR, Slater DM, Tateishi S, Yamaizumi M, Ohmori H, Vaziri C. Rad18 regulates DNA polymerase kappa and is required for recovery from S-phase checkpoint-mediated arrest. Mol Cell Biol 2006; 26:3527-40.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 3527-3540
-
-
Bi, X.1
Barkley, L.R.2
Slater, D.M.3
Tateishi, S.4
Yamaizumi, M.5
Ohmori, H.6
Vaziri, C.7
-
19
-
-
33646156444
-
Cip1/WAF1 downregulation is required for efficient PCNA ubiquitination after UV irradiation
-
Cip1/WAF1 downregulation is required for efficient PCNA ubiquitination after UV irradiation. Oncogene 2006; 25:2829-38.
-
(2006)
Oncogene
, vol.25
, pp. 2829-2838
-
-
Soria, G.1
Podhajcer, O.2
Prives, C.3
Gottifredi, V.4
-
20
-
-
33745629358
-
Postreplication repair and PCNA modification in Schizosaccharomyces pombe
-
Frampton J, Irmisch A, Green CM, Neiss A, Trickey M, Ulrich HD, Furuya K, Watts FZ, Carr AM, Lehmann AR. Postreplication repair and PCNA modification in Schizosaccharomyces pombe. Mol Biol Cell 2006; 17:2976-85.
-
(2006)
Mol Biol Cell
, vol.17
, pp. 2976-2985
-
-
Frampton, J.1
Irmisch, A.2
Green, C.M.3
Neiss, A.4
Trickey, M.5
Ulrich, H.D.6
Furuya, K.7
Watts, F.Z.8
Carr, A.M.9
Lehmann, A.R.10
-
21
-
-
0030800865
-
Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities
-
Bailly V, Lauder S, Prakash S, Prakash L. Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities. J Biol Chem 1997; 272:23360-5.
-
(1997)
J Biol Chem
, vol.272
, pp. 23360-23365
-
-
Bailly, V.1
Lauder, S.2
Prakash, S.3
Prakash, L.4
-
22
-
-
0034915764
-
Mechanisms underlying ubiquitination
-
Pickart CM. Mechanisms underlying ubiquitination. Annu Rev Biochem 2001; 70:503-33.
-
(2001)
Annu Rev Biochem
, vol.70
, pp. 503-533
-
-
Pickart, C.M.1
-
23
-
-
34848877881
-
Functional characterization of Rad18 domains for Rad6, ubiquitin, DNA binding and PCNA modification
-
Notenboom V, Hibbert RG, van Rossum-Fikkert SE, Olsen JV, Mann M, Sixma TK. Functional characterization of Rad18 domains for Rad6, ubiquitin, DNA binding and PCNA modification. Nucleic Acids Res 2007; 35:5819-30.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5819-5830
-
-
Notenboom, V.1
Hibbert, R.G.2
van Rossum-Fikkert, S.E.3
Olsen, J.V.4
Mann, M.5
Sixma, T.K.6
-
24
-
-
34548156750
-
Werner helicase-interacting protein 1 binds polyubiquitin via its zinc finger domain
-
Bish RA, Myers MP. Werner helicase-interacting protein 1 binds polyubiquitin via its zinc finger domain. J Biol Chem 2007; 282:23184-93.
-
(2007)
J Biol Chem
, vol.282
, pp. 23184-23193
-
-
Bish, R.A.1
Myers, M.P.2
-
25
-
-
0034161452
-
SAP - a putative DNA-binding motif involved in chromosomal organization
-
Aravind L, Koonin EV. SAP - a putative DNA-binding motif involved in chromosomal organization. Trends Biochem Sci 2000; 25:112-4.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 112-114
-
-
Aravind, L.1
Koonin, E.V.2
-
26
-
-
0033801353
-
-
Kipp M, Gohring F, Ostendorp T, van Drunen CM, van Driel R, Przybylski M, Fackelmayer FO. SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA. Mol Cell Biol 2000; 20:7480-9.
-
Kipp M, Gohring F, Ostendorp T, van Drunen CM, van Driel R, Przybylski M, Fackelmayer FO. SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA. Mol Cell Biol 2000; 20:7480-9.
-
-
-
-
27
-
-
41149165416
-
Recognition of forked and single-stranded DNA structures by human RAD18 complexed with RAD6B protein triggers its recruitment to stalled replication forks
-
Tsuji Y, Watanabe K, Araki K, Shinohara M, Yamagata Y, Tsurimoto T, Hanaoka F, Yamamura K, Yamaizumi M, Tateishi S. Recognition of forked and single-stranded DNA structures by human RAD18 complexed with RAD6B protein triggers its recruitment to stalled replication forks. Genes Cells 2008; 13:343-54.
-
(2008)
Genes Cells
, vol.13
, pp. 343-354
-
-
Tsuji, Y.1
Watanabe, K.2
Araki, K.3
Shinohara, M.4
Yamagata, Y.5
Tsurimoto, T.6
Hanaoka, F.7
Yamamura, K.8
Yamaizumi, M.9
Tateishi, S.10
-
28
-
-
33845933389
-
Replication-dependent and -independent responses of RAD18 to DNA damage in human cells
-
Nakajima S, Lan L, Kanno S, Usami N, Kobayashi K, Mori M, Shiomi T, Yasui A. Replication-dependent and -independent responses of RAD18 to DNA damage in human cells. J Biol Chem 2006; 281:34687-95.
-
(2006)
J Biol Chem
, vol.281
, pp. 34687-34695
-
-
Nakajima, S.1
Lan, L.2
Kanno, S.3
Usami, N.4
Kobayashi, K.5
Mori, M.6
Shiomi, T.7
Yasui, A.8
-
29
-
-
0028314007
-
Specific complex formation between yeast RAD6 and RAD18 proteins: A potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites
-
Bailly V, Lamb J, Sung P, Prakash S, Prakash L. Specific complex formation between yeast RAD6 and RAD18 proteins: a potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites. Genes Dev 1994; 8:811-20.
-
(1994)
Genes Dev
, vol.8
, pp. 811-820
-
-
Bailly, V.1
Lamb, J.2
Sung, P.3
Prakash, S.4
Prakash, L.5
-
30
-
-
0035797383
-
The DNA replication checkpoint response stabilizes stalled replication forks
-
Lopes M, Cotta-Ramusino C, Pellicioli A, Liberi G, Plevani P, Muzi-Falconi M, Newlon CS, Foiani M. The DNA replication checkpoint response stabilizes stalled replication forks. Nature 2001; 412:557-61.
-
(2001)
Nature
, vol.412
, pp. 557-561
-
-
Lopes, M.1
Cotta-Ramusino, C.2
Pellicioli, A.3
Liberi, G.4
Plevani, P.5
Muzi-Falconi, M.6
Newlon, C.S.7
Foiani, M.8
-
31
-
-
0037567268
-
Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes
-
Zou L, Elledge SJ. Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes. Science 2003; 300:1542-8.
-
(2003)
Science
, vol.300
, pp. 1542-1548
-
-
Zou, L.1
Elledge, S.J.2
-
32
-
-
0345564858
-
Replication protein A-mediated recruitment and activation of Rad17 complexes
-
Zou L, Liu D, Elledge SJ. Replication protein A-mediated recruitment and activation of Rad17 complexes. Proc Natl Acad Sci USA 2003; 100:13827-32.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13827-13832
-
-
Zou, L.1
Liu, D.2
Elledge, S.J.3
-
33
-
-
0028213449
-
Heat-inducible degron: A method for constructing temperature-sensitive mutants
-
Dohmen RJ, Wu P, Varshavsky A. Heat-inducible degron: a method for constructing temperature-sensitive mutants. Science 1994; 263:1273-6.
-
(1994)
Science
, vol.263
, pp. 1273-1276
-
-
Dohmen, R.J.1
Wu, P.2
Varshavsky, A.3
-
34
-
-
51949083815
-
SUMO modification of PCNA is controlled by DNA
-
Parker JL, Bucceri A, Davies AA, Heidrich K, Windecker H, Ulrich HD. SUMO modification of PCNA is controlled by DNA. EMBO J 2008; 27:2422-31.
-
(2008)
EMBO J
, vol.27
, pp. 2422-2431
-
-
Parker, J.L.1
Bucceri, A.2
Davies, A.A.3
Heidrich, K.4
Windecker, H.5
Ulrich, H.D.6
-
35
-
-
0029798240
-
Functional domains of the 70-kilodalton subunit of human replication protein A
-
Gomes XV, Wold MS. Functional domains of the 70-kilodalton subunit of human replication protein A. Biochemistry 1996; 35:10558-68.
-
(1996)
Biochemistry
, vol.35
, pp. 10558-10568
-
-
Gomes, X.V.1
Wold, M.S.2
-
36
-
-
34247877694
-
Function of a conserved checkpoint recruitment domain in ATRIP proteins
-
Ball HL, Ehrhardt MR, Mordes DA, Glick GG, Chazin WJ, Cortez D. Function of a conserved checkpoint recruitment domain in ATRIP proteins. Mol Cell Biol 2007; 27:3367-77.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 3367-3377
-
-
Ball, H.L.1
Ehrhardt, M.R.2
Mordes, D.A.3
Glick, G.G.4
Chazin, W.J.5
Cortez, D.6
-
37
-
-
0030908093
-
Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
-
Wold MS. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu Rev Biochem 1997; 66:61-92.
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 61-92
-
-
Wold, M.S.1
-
38
-
-
0035253862
-
Structure of the major single-stranded DNA-binding domain of replication protein A suggests a dynamic mechanism for DNA binding
-
Bochkareva E, Belegu V, Korolev S, Bochkarev A. Structure of the major single-stranded DNA-binding domain of replication protein A suggests a dynamic mechanism for DNA binding. EMBO J 2001; 20:612-8.
-
(2001)
EMBO J
, vol.20
, pp. 612-618
-
-
Bochkareva, E.1
Belegu, V.2
Korolev, S.3
Bochkarev, A.4
-
39
-
-
0031930488
-
DNA-dependent protein kinase: DNA binding and activation in the absence of Ku
-
Hammarsten O, Chu G. DNA-dependent protein kinase: DNA binding and activation in the absence of Ku. Proc Natl Acad Sci USA 1998; 95:525-30.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 525-530
-
-
Hammarsten, O.1
Chu, G.2
-
40
-
-
21244449061
-
Crosstalk between SUMO and ubiquitin on PCNA is mediated by recruitment of the helicase Srs2p
-
Papouli E, Chen S, Davies AA, Huttner D, Krejci L, Sung P, Ulrich HD. Crosstalk between SUMO and ubiquitin on PCNA is mediated by recruitment of the helicase Srs2p. Mol Cell 2005; 19:123-33.
-
(2005)
Mol Cell
, vol.19
, pp. 123-133
-
-
Papouli, E.1
Chen, S.2
Davies, A.A.3
Huttner, D.4
Krejci, L.5
Sung, P.6
Ulrich, H.D.7
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