-
1
-
-
0030582712
-
Zebrafish make a big splash
-
10.1016/S0092-8674(00)81792-4 8978602
-
Eisen JS Zebrafish make a big splash Cell 1996, 87(6):969-977. 10.1016/ S0092-8674(00)81792-4 8978602
-
(1996)
Cell
, vol.87
, Issue.6
, pp. 969-977
-
-
Eisen, J.S.1
-
2
-
-
21344471138
-
Real-time QPCR normalisation; strategies and considerations
-
10.1038/sj.gene.6364190
-
Huggett J Dheda K Bustin S Zumla A Real-time QPCR normalisation; strategies and considerations Genes and Immunity 2005, 6:279-284. 10.1038/sj.gene.6364190
-
(2005)
Genes and Immunity
, vol.6
, pp. 279-284
-
-
Huggett, J.1
Dheda, K.2
Bustin, S.3
Zumla, A.4
-
3
-
-
34948893564
-
Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR
-
Aug 15 2000887 17697375 10.1186/1471-2199-8-67
-
Nygard AB Jorgenson CB Cierra S Fredholm M Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR BMC Molecular Biology 8, 67. 2007 Aug 15 2000887 17697375 10.1186/ 1471-2199-8-67
-
(2007)
BMC Molecular Biology
, vol.8
, pp. 67
-
-
Nygard, A.B.1
Jorgenson, C.B.2
Cierra, S.3
Fredholm, M.4
-
4
-
-
0033775615
-
Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays
-
10.1677/jme.0.0250169 11013345
-
Bustin SA Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays J Mol Endocrinol 2000, 25(2):169-193. 10.1677/jme.0.0250169 11013345
-
(2000)
J Mol Endocrinol
, vol.25
, Issue.2
, pp. 169-193
-
-
Bustin, S.A.1
-
5
-
-
0036668567
-
Quantification of mRNA using real-time reverse transcription (PCR QPCR): Trends and problems
-
10.1677/jme.0.0290023 12200227
-
Bustin SA Quantification of mRNA using real-time reverse transcription (PCR QPCR): Trends and problems J Mol Endocrinol 2002, 29:23-39. 10.1677/ jme.0.0290023 12200227
-
(2002)
J Mol Endocrinol
, vol.29
, pp. 23-39
-
-
Bustin, S.A.1
-
7
-
-
33645505177
-
Comparison of in vitro and in vivo reference genes for internal standardization of real-time PCR data
-
10.2144/000112052 16526406
-
Gilsbach R Kouta M Boenisch H Bruess M Comparison of in vitro and in vivo reference genes for internal standardization of real-time PCR data Biotechniques 2006, 40(2):173-177. 10.2144/000112052 16526406
-
(2006)
Biotechniques
, vol.40
, Issue.2
, pp. 173-177
-
-
Gilsbach, R.1
Kouta, M.2
Boenisch, H.3
Bruess, M.4
-
8
-
-
0034694128
-
Effect of experimental treatment on housekeeping gene expression: Validation by real-time quantitative QPCR
-
11086195 10.1016/S0165-022X(00)00129-9
-
Schmittgen TD Zakrajsek BA Effect of experimental treatment on housekeeping gene expression: Validation by real-time quantitative QPCR J Biochem Bioph Meth 2000, 46:69-81. 11086195 10.1016/ S0165-022X(00)00129-9
-
(2000)
J Biochem Bioph Meth
, vol.46
, pp. 69-81
-
-
Schmittgen, T.D.1
Zakrajsek, B.A.2
-
9
-
-
33847286537
-
Appropriate 'housekeeping' genes for use in expression profiling the effects of environmental estrogens in fish
-
Feb 8 1802086 17288598 10.1186/1471-2199-8-10
-
Filby A Tyler C Appropriate 'housekeeping' genes for use in expression profiling the effects of environmental estrogens in fish BMC Molecular Biology 8:10. 2007, Feb 8 1802086 17288598 10.1186/1471-2199-8-10
-
(2007)
BMC Molecular Biology
, vol.8
, pp. 10
-
-
Filby, A.1
Tyler, C.2
-
10
-
-
34249023638
-
Validation of Zebrafish (Danio rerio) Reference Genes for Quantitative Real-time QPCR Normalization
-
10.1111/j.1745-7270.2007.00283.x 17492136
-
Tang R Dodd A Lai D McNabb WC Love DR Validation of Zebrafish (Danio rerio) Reference Genes for Quantitative Real-time QPCR Normalization Acta Biochim Biophys Sin 2007, 39(5):384-90. 10.1111/ j.1745-7270.2007.00283.x 17492136
-
(2007)
Acta Biochim Biophys Sin
, vol.39
, Issue.5
, pp. 384-390
-
-
Tang, R.1
Dodd, A.2
Lai, D.3
McNabb, W.C.4
Love, D.R.5
-
12
-
-
0035109037
-
Distinct cytochrome P450 aromatase isoforms in zebrafish (Danio rerio) brain and ovary are differentially programmed and estrogen regulated during early development
-
11159846 10.1210/en.142.2.740
-
Kishida M Callard GV Distinct cytochrome P450 aromatase isoforms in zebrafish (Danio rerio) brain and ovary are differentially programmed and estrogen regulated during early development Endocrinol 2001, 142(2):740-750. 11159846 10.1210/en.142.2.740
-
(2001)
Endocrinol
, vol.142
, Issue.2
, pp. 740-750
-
-
Kishida, M.1
Callard, G.V.2
-
13
-
-
33646351957
-
Real-time PCR analysis of cytochrome P450 aromatase expression in zebrafish: Gene specific tissue distribution, sex differences, developmental programming, and estrogen regulation
-
10.1016/j.ygcen.2005.12.010 16458310
-
Sawyer SJ Gerstner KA Callard GV Real-time PCR analysis of cytochrome P450 aromatase expression in zebrafish: Gene specific tissue distribution, sex differences, developmental programming, and estrogen regulation Gen Comp Endocrinol 2006, 147(2):108-117. 10.1016/ j.ygcen.2005.12.010 16458310
-
(2006)
Gen Comp Endocrinol
, vol.147
, Issue.2
, pp. 108-117
-
-
Sawyer, S.J.1
Gerstner, K.A.2
Callard, G.V.3
-
14
-
-
0036336890
-
The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo
-
11923199
-
Keegan BR Feldman JL Lee DH Koos DS Ho RK Stainier DY Yelon D The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo Development 2002, 129:1623-1632. 11923199
-
(2002)
Development
, vol.129
, pp. 1623-1632
-
-
Keegan, B.R.1
Feldman, J.L.2
Lee, D.H.3
Koos, D.S.4
Ho, R.K.5
Stainier, D.Y.6
Yelon, D.7
-
15
-
-
23844441346
-
Cloning of a second form of activin-βA cDNA and regulation of activin-βA subunits and activin type II receptor mRNA expression by gonadotropin in the zebrafish ovary
-
15925369 10.1016/j.ygcen.2005.04.003
-
Dimuccio T Mukai ST Clelland E Kohli G Cuartero M Wu T Peng C Cloning of a second form of activin-βA cDNA and regulation of activin-βA subunits and activin type II receptor mRNA expression by gonadotropin in the zebrafish ovary Gen Comp Endo 2005, 143(3):287-299. 15925369 10.1016/ j.ygcen.2005.04.003
-
(2005)
Gen Comp Endo
, vol.143
, Issue.3
, pp. 287-299
-
-
Dimuccio, T.1
Mukai, S.T.2
Clelland, E.3
Kohli, G.4
Cuartero, M.5
Wu, T.6
Peng, C.7
-
16
-
-
28444434535
-
Loss of function of def selectively up-regulates Delta113p53 expression to arrest expansion growth of digestive organs in zebrafish
-
16322560 10.1101/gad.1366405
-
Chen J Ruan H NG SM Gao C Soo HM Wu W Zhang Z Wen Z Lane DP Peng J Loss of function of def selectively up-regulates Delta113p53 expression to arrest expansion growth of digestive organs in zebrafish Genes and Development 2005, 19(23):2900-11. 16322560 10.1101/gad.1366405
-
(2005)
Genes and Development
, vol.19
, Issue.23
, pp. 2900-2911
-
-
Chen, J.1
Ruan, H.2
Ng, S.M.3
Gao, C.4
Soo, H.M.5
Wu, W.6
Zhang, Z.7
Wen, Z.8
Lane, D.P.9
Peng, J.10
-
17
-
-
33746375021
-
The effects of dietary iron concentration on gastrointestinal and branchial assimilation of both iron and cadmium in zebrafish (Danio rerio)
-
16844240 10.1016/j.aquatox.2006.06.008
-
Cooper CA Handy RD Bury NR The effects of dietary iron concentration on gastrointestinal and branchial assimilation of both iron and cadmium in zebrafish (Danio rerio) Aquatic Tox 2006, 79(2):167-75. 16844240 10.1016/ j.aquatox.2006.06.008
-
(2006)
Aquatic Tox
, vol.79
, Issue.2
, pp. 167-175
-
-
Cooper, C.A.1
Handy, R.D.2
Bury, N.R.3
-
18
-
-
27244436730
-
Duplicate aryl hydrocarbon receptor repressor genes (ahrr1 and ahrr2) in the zebrafish Danio rerio: Structure, function, evolution, and AHR-dependent regulation in vivo
-
10.1016/j.abb.2005.07.008 16122694
-
Evans BR Karchner SI Franks DG Hahn ME Duplicate aryl hydrocarbon receptor repressor genes (ahrr1 and ahrr2) in the zebrafish Danio rerio: structure, function, evolution, and AHR-dependent regulation in vivo Arch Biochem Biophys 2005, 441(2):151-67. 10.1016/j.abb.2005.07.008 16122694
-
(2005)
Arch Biochem Biophys
, vol.441
, Issue.2
, pp. 151-167
-
-
Evans, B.R.1
Karchner, S.I.2
Franks, D.G.3
Hahn, M.E.4
-
19
-
-
33846556363
-
Development and validation of endogenous reference genes for expression profiling of Medaka (Oryzias latipes) exposed to endocrine disrupting chemicals by quantitative real-rime RT-PCR
-
10.1093/toxsci/kfl161 17093204
-
Zhang Z Hu J Development and validation of endogenous reference genes for expression profiling of Medaka (Oryzias latipes) exposed to endocrine disrupting chemicals by quantitative real-rime RT-PCR Toxicol Sci 2007, 95(2):356-368. 10.1093/toxsci/kfl161 17093204
-
(2007)
Toxicol Sci
, vol.95
, pp. 356-368
-
-
Zhang, Z.1
Hu, J.2
-
20
-
-
39449122159
-
Biomarkers for exposure to estrogenic compounds: Expression analysis in zebrafish (Danio rerio)
-
10.1002/tox.20306 18214933
-
Kausch U Alberti M Haindl S Budczies J Hock B Biomarkers for exposure to estrogenic compounds: Gene expression analysis in zebrafish (Danio rerio) Environ Toxicol 2008, 23(1):15-24. 10.1002/tox.20306 18214933
-
(2008)
Environ Toxicol
, vol.23
, Issue.1
, pp. 15-24
-
-
Kausch, U.1
Alberti, M.2
Haindl, S.3
Budczies, J.4
Hock, B.5
-
21
-
-
34547104388
-
Microarray analysis in the zebrafish (Danio rerio) liver and telencephalon after exposure to low concentration of 17alpha-ethinylestradiol
-
10.1016/j.aquatox.2007.05.012 17606305
-
Martyniuk CJ Gerrie ER Popesku JT Ekker M Trudeau VL Microarray analysis in the zebrafish (Danio rerio) liver and telencephalon after exposure to low concentration of 17alpha-ethinylestradiol Aquat Toxicol 2007, 84(1):38-49. 10.1016/j.aquatox.2007.05.012 17606305
-
(2007)
Aquat Toxicol
, vol.84
, Issue.1
, pp. 38-49
-
-
Martyniuk, C.J.1
Gerrie, E.R.2
Popesku, J.T.3
Ekker, M.4
Trudeau, V.L.5
-
22
-
-
27644563899
-
The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization
-
10.1016/j.ab.2005.05.022
-
Dheda K Huggett JF Chang JS Kim LU Bustin SA Johnson MA Rook GA Zumla A The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization Annal Biochem 2005, 344(1):141-143. 10.1016/j.ab.2005.05.022
-
(2005)
Annal Biochem
, vol.344
, Issue.1
, pp. 141-143
-
-
Dheda, K.1
Huggett, J.F.2
Chang, J.S.3
Kim, L.U.4
Bustin, S.A.5
Johnson, M.A.6
Rook, G.A.7
Zumla, A.8
-
23
-
-
0036729454
-
Beta-actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels
-
1746418 12200519 10.1136/thorax.57.9.765
-
Glare EM Divjak M Bailey MJ Walters EH Beta-actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels Thorax 2002, 57(9):765-770. 1746418 12200519 10.1136/thorax.57.9.765
-
(2002)
Thorax
, vol.57
, Issue.9
, pp. 765-770
-
-
Glare, E.M.1
Divjak, M.2
Bailey, M.J.3
Walters, E.H.4
-
24
-
-
0035988706
-
Differentiating embryonic stem cells: GAPDH, but neither HPRT nor beta-tuba1 is suitable as an internal standard for measuring RNA levels
-
10.1089/107632702760240472 12201995
-
Murphy CL Polak JM Differentiating embryonic stem cells: GAPDH, but neither HPRT nor beta-tuba1 is suitable as an internal standard for measuring RNA levels Tissue Eng 2002, 8(4):551-559. 10.1089/ 107632702760240472 12201995
-
(2002)
Tissue Eng
, vol.8
, Issue.4
, pp. 551-559
-
-
Murphy, C.L.1
Polak, J.M.2
-
25
-
-
0033511440
-
The housekeeping gene glyceraldehyde-3-phosphate dehydrogenase is inappropriate as internal control in comparative studies between skin tissue and cultured skin fibroblasts using Northern blot analysis
-
10.1007/s004030050471 10651167
-
Oliveriera JG Prados RZ Guedes AC Ferreira PC Kroon EG The housekeeping gene glyceraldehyde-3-phosphate dehydrogenase is inappropriate as internal control in comparative studies between skin tissue and cultured skin fibroblasts using Northern blot analysis Arch Dermatol Res 1999, 291(12): 659-651. 10.1007/s004030050471 10651167
-
(1999)
Arch Dermatol Res
, vol.291
, Issue.12
, pp. 651-659
-
-
Oliveriera, J.G.1
Prados, R.Z.2
Guedes, A.C.3
Ferreira, P.C.4
Kroon, E.G.5
-
26
-
-
0035197018
-
Beta actin - An unsuitable internal control for RT-PCR
-
10.1006/mcpr.2001.0376 11735303
-
Selvey S Thompson EW Matthaei K Lea RA Irving MG Griffiths LR Beta actin - an unsuitable internal control for RT-PCR Mol Cell Probes 2001, 15(3):307-311. 10.1006/mcpr.2001.0376 11735303
-
(2001)
Mol Cell Probes
, vol.15
, Issue.3
, pp. 307-311
-
-
Selvey, S.1
Thompson, E.W.2
Matthaei, K.3
Lea, R.A.4
Irving, M.G.5
Griffiths, L.R.6
-
27
-
-
0037109753
-
Quantitative real-time reverse transcription polymerase chain reaction: Normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies
-
12413463 10.1016/S0003-2697(02)00311-1
-
Tricarico C Pinzani P Bianchi S Paglierani M Distante V Pizzagli M Bustin SA Orlando C Quantitative real-time reverse transcription polymerase chain reaction: Normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies Annal Biochem 2002, 309(2):293-300. 12413463 10.1016/S0003-2697(02)00311-1
-
(2002)
Annal Biochem
, vol.309
, Issue.2
, pp. 293-300
-
-
Tricarico, C.1
Pinzani, P.2
Bianchi, S.3
Paglierani, M.4
Distante, V.5
Pizzagli, M.6
Bustin, S.A.7
Orlando, C.8
-
28
-
-
0033575003
-
Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia
-
10.1006/bbrc.1999.0815 10364451
-
Zhong H Simons JW Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia Biochem Biophys Res Commun 1999, 259(3):523-526. 10.1006/ bbrc.1999.0815 10364451
-
(1999)
Biochem Biophys Res Commun
, vol.259
, Issue.3
, pp. 523-526
-
-
Zhong, H.1
Simons, J.W.2
-
29
-
-
0034897153
-
Changes in rRNA levels during stress invalidates results from mRNA blotting: Flourescence in situ rRNA hybridization permits renormalization for estimation of cellular mRNA levels
-
99528 11466277 10.1128/JB.183.16.4747-4751.2001
-
Hansen MC Nielsen AK Molin S Hammer K Kilstrup M Changes in rRNA levels during stress invalidates results from mRNA blotting: Flourescence in situ rRNA hybridization permits renormalization for estimation of cellular mRNA levels J Bacteriol 2001, 183:4747-4751. 99528 11466277 10.1128/JB.183.16.4747-4751.2001
-
(2001)
J Bacteriol
, vol.183
, pp. 4747-4751
-
-
Hansen, M.C.1
Nielsen, A.K.2
Molin, S.3
Hammer, K.4
Kilstrup, M.5
-
30
-
-
0027218078
-
Problems related to the interpretation of autoradiographic data of gene expression using common constituitive transcripts as controls
-
309896 8367299 10.1093/nar/21.16.3809
-
Spanakis E Problems related to the interpretation of autoradiographic data of gene expression using common constituitive transcripts as controls Nucleic Acid Res 1993, 21:3809-3819. 309896 8367299 10.1093/nar/ 21.16.3809
-
(1993)
Nucleic Acid Res
, vol.21
, pp. 3809-3819
-
-
Spanakis, E.1
-
31
-
-
34147116274
-
Pitfalls in the normalization of real-time polymerase chain reaction data
-
10.1007/s00395-007-0649-0 17370033
-
Hendriks-Balk MC Michel MC Alewijnse AE Pitfalls in the normalization of real-time polymerase chain reaction data Basic Res Cardiol 2007, 102:195-197. 10.1007/s00395-007-0649-0 17370033
-
(2007)
Basic Res Cardiol
, vol.102
, pp. 195-197
-
-
Hendriks-Balk, M.C.1
Michel, M.C.2
Alewijnse, A.E.3
-
32
-
-
0035161457
-
Unsuitability of using ribosomal RNA as loading control for Northern blot anlyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors
-
10.1006/abio.2000.4889 11141312
-
Solanas M Moral R Escrich E Unsuitability of using ribosomal RNA as loading control for Northern blot anlyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors Anal Biochem 2001, 288:99-102. 10.1006/abio.2000.4889 11141312
-
(2001)
Anal Biochem
, vol.288
, pp. 99-102
-
-
Solanas, M.1
Moral, R.2
Escrich, E.3
-
33
-
-
0032883806
-
Housekeeping genes as internal standards: Use and limits
-
10.1016/S0168-1656(99)00163-7 10617337
-
Thellin O Zorzi W Lakaye B De Borman B Coumans B Hennen G Grisar T Igout A Heinen E Housekeeping genes as internal standards: Use and limits J Biotechnol 1999, 75:291-295. 10.1016/S0168-1656(99)00163-7 10617337
-
(1999)
J Biotechnol
, vol.75
, pp. 291-295
-
-
Thellin, O.1
Zorzi, W.2
Lakaye, B.3
De Borman, B.4
Coumans, B.5
Hennen, G.6
Grisar, T.7
Igout, A.8
Heinen, E.9
-
34
-
-
0037129827
-
Accurate normalization of real-time quantitative QPCR data by geometric averaging of multiple internal controls
-
12184808 10.1186/gb-2002-3-7-research0034
-
Vandesompele J De Preter K Pattyn F Poppe B Van Roy N De Paepe A Speleman F Accurate normalization of real-time quantitative QPCR data by geometric averaging of multiple internal controls Genome Biol 2002, 3:34. 12184808 10.1186/gb-2002-3-7-research0034
-
(2002)
Genome Biol
, vol.3
, pp. 34
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
35
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
-
10.1023/B:BILE.0000019559.84305.47 15127793
-
Pfaffl MW Tichopad A Prgomet C Neuvians TP Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations Biotechnol Lett 2004, 26:509-515. 10.1023/B:BILE.0000019559.84305.47 15127793
-
(2004)
Biotechnol Lett
, vol.26
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
36
-
-
33646344297
-
-
Westerfield M (Editor) University of Oregon Press
-
Westerfield M (Editor) The Zebrafish Book 4 University of Oregon Press 2000.
-
(2000)
The Zebrafish Book 4
-
-
-
37
-
-
0035667309
-
Promoter Characteristics of two cyp19 genes differentially expressed in the brain and ovary of teleost fish
-
11738553 10.1016/S0960-0760(01)00120-0
-
Tchoudakova A Kishida M Wood E Callard G Promoter Characteristics of two cyp19 genes differentially expressed in the brain and ovary of teleost fish J Steroid Biochem 2001, 78:427-439. 11738553 10.1016/ S0960-0760(01)00120-0
-
(2001)
J Steroid Biochem
, vol.78
, pp. 427-439
-
-
Tchoudakova, A.1
Kishida, M.2
Wood, E.3
Callard, G.4
-
38
-
-
0036281211
-
Processing of gene expression data generated by quantitative real-time QPCR
-
1376, 1378-1379 12074169
-
Muller PY Janoviak H Miserez AR Dobbie Z Processing of gene expression data generated by quantitative real-time QPCR Biotechniques 2002, 32:1372-1374. 1376, 1378-1379 12074169
-
(2002)
Biotechniques
, vol.32
, pp. 1372-1374
-
-
Muller, P.Y.1
Janoviak, H.2
Miserez, A.R.3
Dobbie, Z.4
-
39
-
-
0037134017
-
Tech Sight A technique whose time has come
-
10.1126/science.296.5567.557 11964485
-
Walker NJ Tech Sight A technique whose time has come Science 2002, 296:557-559. 10.1126/science.296.5567.557 11964485
-
(2002)
Science
, vol.296
, pp. 557-559
-
-
Walker, N.J.1
|