-
1
-
-
39149126958
-
Isoform switching facilitates period control in the Neurospora crassa circadian clock
-
doi: 10.1038/msb.2008.5
-
Akman, O.E., Locke, J.C., Tang, S., Carre, I., Millar, A.J., and Rand, D.A. 2008. Isoform switching facilitates period control in the Neurospora crassa circadian clock. Mol. Syst. Biol. 4: 186. doi: 10.1038/msb.2008.5.
-
(2008)
Mol. Syst. Biol
, vol.4
, pp. 186
-
-
Akman, O.E.1
Locke, J.C.2
Tang, S.3
Carre, I.4
Millar, A.J.5
Rand, D.A.6
-
2
-
-
0028258994
-
Negative feedback defining a circadian clock: Autoregulation of the clock gene frequency
-
Aronson, B.D., Johnson, K.A., Loros, J.J., and Dunlap, J. 1994. Negative feedback defining a circadian clock: Autoregulation of the clock gene frequency. Science 263: 1578-1584.
-
(1994)
Science
, vol.263
, pp. 1578-1584
-
-
Aronson, B.D.1
Johnson, K.A.2
Loros, J.J.3
Dunlap, J.4
-
3
-
-
0041468805
-
Phosphorylation of mammalian eukaryotic translation initiation factor 6 and its Saccharomyces cerevisiae homologue Tif6p: Evidence that phosphorylation of Tif6p regulates its nucleocytoplasmic distribution and is required for yeast cell growth
-
Basu, U., Si, K., Deng, H., and Maitra, U. 2003. Phosphorylation of mammalian eukaryotic translation initiation factor 6 and its Saccharomyces cerevisiae homologue Tif6p: Evidence that phosphorylation of Tif6p regulates its nucleocytoplasmic distribution and is required for yeast cell growth. Mol. Cell. Biol. 23: 6187-6199.
-
(2003)
Mol. Cell. Biol
, vol.23
, pp. 6187-6199
-
-
Basu, U.1
Si, K.2
Deng, H.3
Maitra, U.4
-
4
-
-
33847021355
-
Execution of the circadian negative feedback loop in Neurospora requires the ATP-dependent chromatin-remodeling enzyme CLOCKSWITCH
-
Belden, W.J., Loros, J.J., and Dunlap, J.C. 2007. Execution of the circadian negative feedback loop in Neurospora requires the ATP-dependent chromatin-remodeling enzyme CLOCKSWITCH. Mol. Cell 25: 587-600.
-
(2007)
Mol. Cell
, vol.25
, pp. 587-600
-
-
Belden, W.J.1
Loros, J.J.2
Dunlap, J.C.3
-
5
-
-
0035863123
-
Coiled-coil domain-mediated FRQ-FRQ interaction is essential for its circadian clock function in Neurospora
-
Cheng, P., Yang, Y., Heintzen, C., and Liu, Y. 2001a. Coiled-coil domain-mediated FRQ-FRQ interaction is essential for its circadian clock function in Neurospora. EMBO J. 20: 101-108.
-
(2001)
EMBO J
, vol.20
, pp. 101-108
-
-
Cheng, P.1
Yang, Y.2
Heintzen, C.3
Liu, Y.4
-
6
-
-
0035912804
-
Interlocked feedback loops contribute to the robustness of the Neurospora circadian clock
-
Cheng, P., Yang, Y., and Liu, Y. 2001b. Interlocked feedback loops contribute to the robustness of the Neurospora circadian clock. Proc. Natl. Acad. Sci. 98: 7408-7413.
-
(2001)
Proc. Natl. Acad. Sci
, vol.98
, pp. 7408-7413
-
-
Cheng, P.1
Yang, Y.2
Liu, Y.3
-
7
-
-
0036135673
-
PAS domain-mediated WC-1/WC-2 interaction is essential for maintaining the steady-state level of WC-1 and the function of both proteins in circadian clock and light response of Neurospora
-
Cheng, P., Yang, Y., Gardner, K.H., and Liu, Y. 2002. PAS domain-mediated WC-1/WC-2 interaction is essential for maintaining the steady-state level of WC-1 and the function of both proteins in circadian clock and light response of Neurospora. Mol. Cell. Biol. 22: 517-524.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 517-524
-
-
Cheng, P.1
Yang, Y.2
Gardner, K.H.3
Liu, Y.4
-
8
-
-
0030982250
-
Neurospora wc-1 and wc-2: Transcription, photoresponses, and the origins of circadian rhythmicity
-
Crosthwaite, S.K., Dunlap, J.C., and Loros, J.J. 1997. Neurospora wc-1 and wc-2: Transcription, photoresponses, and the origins of circadian rhythmicity. Science 276: 763-769.
-
(1997)
Science
, vol.276
, pp. 763-769
-
-
Crosthwaite, S.K.1
Dunlap, J.C.2
Loros, J.J.3
-
9
-
-
0035863191
-
WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora
-
Denault, D.L., Loros, J.J., and Dunlap, J.C. 2001. WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora. EMBO J. 20: 109-117.
-
(2001)
EMBO J
, vol.20
, pp. 109-117
-
-
Denault, D.L.1
Loros, J.J.2
Dunlap, J.C.3
-
10
-
-
0033593306
-
Molecular bases for circadian clocks
-
Dunlap, J.C. 1999. Molecular bases for circadian clocks. Cell 96: 271-290.
-
(1999)
Cell
, vol.96
, pp. 271-290
-
-
Dunlap, J.C.1
-
11
-
-
0037947690
-
Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY
-
Froehlich, A.C., Loros, J., and Dunlap, J.C. 2003. Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY. Proc. Natl. Acad. Sci. 100: 5914-5919.
-
(2003)
Proc. Natl. Acad. Sci
, vol.100
, pp. 5914-5919
-
-
Froehlich, A.C.1
Loros, J.2
Dunlap, J.C.3
-
12
-
-
33746041826
-
An opposite role for tau in circadian rhythms revealed by mathematical modeling
-
Gallego, M., Eide, E.J., Woolf, M.F., Virshup, D.M., and Forger, D.B. 2006. An opposite role for tau in circadian rhythms revealed by mathematical modeling. Proc. Natl. Acad. Sci. 103: 10618-10623.
-
(2006)
Proc. Natl. Acad. Sci
, vol.103
, pp. 10618-10623
-
-
Gallego, M.1
Eide, E.J.2
Woolf, M.F.3
Virshup, D.M.4
Forger, D.B.5
-
13
-
-
0031006674
-
Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY
-
Garceau, N.Y., Liu, Y., Loros, J.J., and Dunlap, J. 1997. Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY. Cell 89: 469-476.
-
(1997)
Cell
, vol.89
, pp. 469-476
-
-
Garceau, N.Y.1
Liu, Y.2
Loros, J.J.3
Dunlap, J.4
-
14
-
-
28444464476
-
Molecular mechanism of light responses in Neurospora: From light-induced transcription to photoadaptation
-
He, Q. and Liu, Y. 2005. Molecular mechanism of light responses in Neurospora: From light-induced transcription to photoadaptation. Genes & Dev. 19: 2888-2899.
-
(2005)
Genes & Dev
, vol.19
, pp. 2888-2899
-
-
He, Q.1
Liu, Y.2
-
15
-
-
0042237024
-
FWD1-mediated degradation of FREQUENCY in Neurospora establishes a conserved mechanism for circadian clock regulation
-
He, Q., Cheng, P., Yang, Y., He, Q., Yu, H., and Liu, Y. 2003. FWD1-mediated degradation of FREQUENCY in Neurospora establishes a conserved mechanism for circadian clock regulation. EMBO J. 22: 4421-4430.
-
(2003)
EMBO J
, vol.22
, pp. 4421-4430
-
-
He, Q.1
Cheng, P.2
Yang, Y.3
He, Q.4
Yu, H.5
Liu, Y.6
-
16
-
-
33846568101
-
A proposal for robust temperature compensation of circadian rhythms
-
Hong, C.I., Conrad, E.D., and Tyson, J.J. 2007. A proposal for robust temperature compensation of circadian rhythms. Proc. Natl. Acad. Sci. 104: 1195-1200.
-
(2007)
Proc. Natl. Acad. Sci
, vol.104
, pp. 1195-1200
-
-
Hong, C.I.1
Conrad, E.D.2
Tyson, J.J.3
-
17
-
-
38949103460
-
Simulating dark expressions and interactions of FRQ and WC-1 in the Neurospora circadian clock
-
Hong, C.I., Jolma, I.W., Loros, J.J., Dunlap, J.C., and Ruoff, P. 2008. Simulating dark expressions and interactions of FRQ and WC-1 in the Neurospora circadian clock. Biophys. J. 94: 1221-1232.
-
(2008)
Biophys. J
, vol.94
, pp. 1221-1232
-
-
Hong, C.I.1
Jolma, I.W.2
Loros, J.J.3
Dunlap, J.C.4
Ruoff, P.5
-
18
-
-
33749169177
-
BMAL1 shuttling controls transactivation and degradation of the CLOCK/BMAL1 heterodimer
-
Kwon, I., Lee, J., Chang, S.H., Jung, N.C., Lee, B.J., Son, G.H., Kim, K., and Lee, K.H. 2006. BMAL1 shuttling controls transactivation and degradation of the CLOCK/BMAL1 heterodimer. Mol. Cell. Biol. 26: 7318-7330.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 7318-7330
-
-
Kwon, I.1
Lee, J.2
Chang, S.H.3
Jung, N.C.4
Lee, B.J.5
Son, G.H.6
Kim, K.7
Lee, K.H.8
-
19
-
-
0034617102
-
Interconnected feedback loops in the Neurospora circadian system
-
Lee, K., Loros, J.J., and Dunlap, J.C. 2000. Interconnected feedback loops in the Neurospora circadian system. Science 289: 107-110.
-
(2000)
Science
, vol.289
, pp. 107-110
-
-
Lee, K.1
Loros, J.J.2
Dunlap, J.C.3
-
20
-
-
0035966317
-
Posttranslational mechanisms regulate the mammalian circadian clock
-
Lee, C., Etchegaray, J., Cagampang, F.R.A., Loudon, A.S.I., and Reppert, S.M. 2001. Posttranslational mechanisms regulate the mammalian circadian clock. Cell 107: 855-867.
-
(2001)
Cell
, vol.107
, pp. 855-867
-
-
Lee, C.1
Etchegaray, J.2
Cagampang, F.R.A.3
Loudon, A.S.I.4
Reppert, S.M.5
-
21
-
-
33747369652
-
Circadian rhythms in Neurospora crassa and other filamentous fungi
-
Liu, Y. and Bell-Pedersen, D. 2006. Circadian rhythms in Neurospora crassa and other filamentous fungi. Eukaryot. Cell 5: 1184-1193.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 1184-1193
-
-
Liu, Y.1
Bell-Pedersen, D.2
-
22
-
-
33846050368
-
Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana
-
doi: 10.1038/msb4100102
-
Locke, J.C., Kozma-Bognar, L., Gould, P.D., Feher, B., Kevei, E., Nagy, F., Turner, M.S., Hall, A., and Millar, A.J. 2006. Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana. Mol. Syst. Biol. 2: 59. doi: 10.1038/msb4100102.
-
(2006)
Mol. Syst. Biol
, vol.2
, pp. 59
-
-
Locke, J.C.1
Kozma-Bognar, L.2
Gould, P.D.3
Feher, B.4
Kevei, E.5
Nagy, F.6
Turner, M.S.7
Hall, A.8
Millar, A.J.9
-
23
-
-
0025965014
-
Neurospora crassa clock-controlled genes are regulated at the level of transcription
-
Loros, J.J. and Dunlap, J.C. 1991. Neurospora crassa clock-controlled genes are regulated at the level of transcription. Mol. Cell. Biol. 11: 558-563.
-
(1991)
Mol. Cell. Biol
, vol.11
, pp. 558-563
-
-
Loros, J.J.1
Dunlap, J.C.2
-
24
-
-
0032473361
-
Nuclear localization is required for function for the essential clock protein FRQ
-
Luo, C., Loros, J.J., and Dunlap, J. 1998. Nuclear localization is required for function for the essential clock protein FRQ. EMBO J. 17: 1228-1235.
-
(1998)
EMBO J
, vol.17
, pp. 1228-1235
-
-
Luo, C.1
Loros, J.J.2
Dunlap, J.3
-
25
-
-
48249113963
-
Biological rhythms workshop IA: Molecular basis of rhythms generation
-
Mackey, S.R. 2007. Biological rhythms workshop IA: Molecular basis of rhythms generation. Cold Spring Harb. Symp. Quant. Biol. 72: 7-19.
-
(2007)
Cold Spring Harb. Symp. Quant. Biol
, vol.72
, pp. 7-19
-
-
Mackey, S.R.1
-
26
-
-
0036493241
-
Phosphorylation of mammalian translation initiation factor 5 (eIF5) in vitro and in vivo
-
Majumdar, R., Bandyopadhyay, A., Deng, H., and Maitra, U. 2002. Phosphorylation of mammalian translation initiation factor 5 (eIF5) in vitro and in vivo. Nucleic Acids Res. 30: 1154-1162.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1154-1162
-
-
Majumdar, R.1
Bandyopadhyay, A.2
Deng, H.3
Maitra, U.4
-
27
-
-
0037178787
-
The orphan nuclear receptor REV-ERBα controls circadian transcription within the positive limb of the mammalian circadian oscillator
-
Preitner, N., Damiola, F., Lopez-Molina, L., Zakany, J., Duboule, D., Albrecht, U., and Schibler, U. 2002. The orphan nuclear receptor REV-ERBα controls circadian transcription within the positive limb of the mammalian circadian oscillator. Cell 110: 251-260.
-
(2002)
Cell
, vol.110
, pp. 251-260
-
-
Preitner, N.1
Damiola, F.2
Lopez-Molina, L.3
Zakany, J.4
Duboule, D.5
Albrecht, U.6
Schibler, U.7
-
28
-
-
29144492754
-
The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock
-
Ruoff, P., Loros, J.J., and Dunlap, J.C. 2005. The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock. Proc. Natl. Acad. Sci. 102: 17681-17686.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 17681-17686
-
-
Ruoff, P.1
Loros, J.J.2
Dunlap, J.C.3
-
29
-
-
22744455874
-
Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor
-
Schafmeier, T., Haase, A., Kaldi, K., Scholz, J., Fuchs, M., and Brunner, M. 2005. Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor. Cell 122: 235-246.
-
(2005)
Cell
, vol.122
, pp. 235-246
-
-
Schafmeier, T.1
Haase, A.2
Kaldi, K.3
Scholz, J.4
Fuchs, M.5
Brunner, M.6
-
30
-
-
32044466225
-
Phosphorylation-dependent maturation of Neurospora circadian clock protein from a nuclear repressor toward a cytoplasmic activator
-
Schafmeier, T., Kaldi, K., Diernfellner, A., Mohr, C., and Brunner, M. 2006. Phosphorylation-dependent maturation of Neurospora circadian clock protein from a nuclear repressor toward a cytoplasmic activator. Genes & Dev. 20: 297-306.
-
(2006)
Genes & Dev
, vol.20
, pp. 297-306
-
-
Schafmeier, T.1
Kaldi, K.2
Diernfellner, A.3
Mohr, C.4
Brunner, M.5
-
31
-
-
0034640253
-
Interacting molecular loops in the mammalian circadian clock
-
Shearman, L.P., Sriram, S., Weaver, D.R., Maywood, E.S., Chaves, I., Zheng, B., Kume, K., Lee, C.C., van der Horst, G.T., Hastings, M.H., et al. 2000. Interacting molecular loops in the mammalian circadian clock. Science 288: 1013-1019.
-
(2000)
Science
, vol.288
, pp. 1013-1019
-
-
Shearman, L.P.1
Sriram, S.2
Weaver, D.R.3
Maywood, E.S.4
Chaves, I.5
Zheng, B.6
Kume, K.7
Lee, C.C.8
van der Horst, G.T.9
Hastings, M.H.10
-
32
-
-
0033568490
-
Role of a White Collar-1-White Collar-2 complex in blue-light signal transduction
-
Talora, C., Franchi, L., Linden, H., Ballario, P., and Macino, G. 1999. Role of a White Collar-1-White Collar-2 complex in blue-light signal transduction. EMBO J. 18: 4961-4968.
-
(1999)
EMBO J
, vol.18
, pp. 4961-4968
-
-
Talora, C.1
Franchi, L.2
Linden, H.3
Ballario, P.4
Macino, G.5
-
33
-
-
0347917185
-
Nucleocytoplasmic shuttling and phosphorylation of BMAL1 are regulated by circadian clock in cultured fibroblasts
-
Tamaru, T., Isojima, Y., van der Horst, G.T., Takei, K., Nagai, K., and Takamatsu, K. 2003. Nucleocytoplasmic shuttling and phosphorylation of BMAL1 are regulated by circadian clock in cultured fibroblasts. Genes Cells 8: 973-983.
-
(2003)
Genes Cells
, vol.8
, pp. 973-983
-
-
Tamaru, T.1
Isojima, Y.2
van der Horst, G.T.3
Takei, K.4
Nagai, K.5
Takamatsu, K.6
-
34
-
-
48249116714
-
Systems biology of mammalian circadian clocks
-
Ueda, H.R. 2007. Systems biology of mammalian circadian clocks. Cold Spring Harb. Symp. Quant. Biol. 72: 365-380.
-
(2007)
Cold Spring Harb. Symp. Quant. Biol
, vol.72
, pp. 365-380
-
-
Ueda, H.R.1
-
35
-
-
48249149073
-
Reversible protein phosphorylation regulates circadian rhythms
-
Virshup, D.M., Eide, E.J., Forger, D.B., Gallego, M., and Harnish, E.V. 2007. Reversible protein phosphorylation regulates circadian rhythms. Cold Spring Harb. Symp. Quant. Biol. 72: 413-420.
-
(2007)
Cold Spring Harb. Symp. Quant. Biol
, vol.72
, pp. 413-420
-
-
Virshup, D.M.1
Eide, E.J.2
Forger, D.B.3
Gallego, M.4
Harnish, E.V.5
|