메뉴 건너뛰기




Volumn 105, Issue 43, 2008, Pages 16665-16670

Genes involved in pre-mRNA 3′-end formation and transcription termination revealed by a lin-15 operon Muv suppressor screen

Author keywords

Caenorhabditis elegans operon; CTD; RNA polymerase II C terminal domain; SRp20

Indexed keywords

ARGININE; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; CLEAVAGE STIMULATION FACTOR; MESSENGER RNA; RNA POLYMERASE II; SERINE;

EID: 55949125725     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0807104105     Document Type: Article
Times cited : (50)

References (36)
  • 1
    • 19344365530 scopus 로고    scopus 로고
    • Connections between mRNA 3′ end processing and transcription termination
    • Buratowski S (2005) Connections between mRNA 3′ end processing and transcription termination. Curr Opin Cell Biol 17(3):257-261.
    • (2005) Curr Opin Cell Biol , vol.17 , Issue.3 , pp. 257-261
    • Buratowski, S.1
  • 2
    • 0022819015 scopus 로고
    • Alpha-thalassaemia caused by a poly(A) site mutation reveals that transcriptional termination is linked to 3′ end processing in the human alpha 2 globin gene
    • Whitelaw E, Proudfoot N (1986) Alpha-thalassaemia caused by a poly(A) site mutation reveals that transcriptional termination is linked to 3′ end processing in the human alpha 2 globin gene. EMBO J 5(11):2915-2922.
    • (1986) EMBO J , vol.5 , Issue.11 , pp. 2915-2922
    • Whitelaw, E.1    Proudfoot, N.2
  • 3
    • 0023478621 scopus 로고
    • A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin gene
    • Logan J, Falck-Pedersen E, Darnell JE, Jr, Shenk T (1987) A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin gene. Proc Natl Acad Sci USA 84(23):8306-8310.
    • (1987) Proc Natl Acad Sci USA , vol.84 , Issue.23 , pp. 8306-8310
    • Logan, J.1    Falck-Pedersen, E.2    Darnell Jr, J.E.3    Shenk, T.4
  • 4
    • 0023990221 scopus 로고
    • A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase II
    • Connelly S, Manley JL (1988) A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase II. Genes Dev 2(4):440-452.
    • (1988) Genes Dev , vol.2 , Issue.4 , pp. 440-452
    • Connelly, S.1    Manley, J.L.2
  • 5
    • 0032502825 scopus 로고    scopus 로고
    • Coupling termination of transcription to messenger RNA maturation in yeast
    • Birse CE, Minvielle-Sebastia L, Lee BA, Keller W, Proudfoot NJ (1998) Coupling termination of transcription to messenger RNA maturation in yeast. Science 280(5361):298-301.
    • (1998) Science , vol.280 , Issue.5361 , pp. 298-301
    • Birse, C.E.1    Minvielle-Sebastia, L.2    Lee, B.A.3    Keller, W.4    Proudfoot, N.J.5
  • 6
    • 0036682601 scopus 로고    scopus 로고
    • Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination
    • Dichtl B, et al. (2002) Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination. EMBO J 21(15):4125-4135.
    • (2002) EMBO J , vol.21 , Issue.15 , pp. 4125-4135
    • Dichtl, B.1
  • 7
    • 0032480229 scopus 로고    scopus 로고
    • RNA polymerase II is an essential mRNA polyadenylation factor
    • Hirose Y, Manley JL (1998) RNA polymerase II is an essential mRNA polyadenylation factor. Nature 395(6697):93-96.
    • (1998) Nature , vol.395 , Issue.6697 , pp. 93-96
    • Hirose, Y.1    Manley, J.L.2
  • 8
    • 15644372864 scopus 로고    scopus 로고
    • 5-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II
    • McCracken S, et al. (1997) 5-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II. Genes Dev 11(24):3306-3318.
    • (1997) Genes Dev , vol.11 , Issue.24 , pp. 3306-3318
    • McCracken, S.1
  • 9
    • 0035895294 scopus 로고    scopus 로고
    • Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae
    • Barilla D, Lee BA, Proudfoot NJ (2001) Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 98(2):445-450.
    • (2001) Proc Natl Acad Sci USA , vol.98 , Issue.2 , pp. 445-450
    • Barilla, D.1    Lee, B.A.2    Proudfoot, N.J.3
  • 10
    • 0035878112 scopus 로고    scopus 로고
    • Capping, splicing, and 3 processing are independently stimulated by RNA polymerase II: Different functions for different segments of the CTD
    • Fong N, Bentley DL (2001) Capping, splicing, and 3 processing are independently stimulated by RNA polymerase II: Different functions for different segments of the CTD. Genes Dev 15(14):1783-1795.
    • (2001) Genes Dev , vol.15 , Issue.14 , pp. 1783-1795
    • Fong, N.1    Bentley, D.L.2
  • 11
    • 0024447921 scopus 로고
    • RNA polymerase II transcription termination is mediated specifically by protein binding to a CCAAT box sequence
    • Connelly S, Manley JL (1989) RNA polymerase II transcription termination is mediated specifically by protein binding to a CCAAT box sequence. Mol Cell Biol 9(11):5254-5259.
    • (1989) Mol Cell Biol , vol.9 , Issue.11 , pp. 5254-5259
    • Connelly, S.1    Manley, J.L.2
  • 12
    • 0024562757 scopus 로고
    • How RNA polymerase II terminates transcription in higher eukaryotes
    • Proudfoot NJ (1989) How RNA polymerase II terminates transcription in higher eukaryotes. Trends Biochem Sci 14(3):105-110.
    • (1989) Trends Biochem Sci , vol.14 , Issue.3 , pp. 105-110
    • Proudfoot, N.J.1
  • 13
    • 9644308046 scopus 로고    scopus 로고
    • Human 5′ -> 3′ exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites
    • West S, Gromak N, Proudfoot NJ (2004) Human 5′ -> 3′ exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites. Nature 432(7016):522-525.
    • (2004) Nature , vol.432 , Issue.7016 , pp. 522-525
    • West, S.1    Gromak, N.2    Proudfoot, N.J.3
  • 14
    • 0033106189 scopus 로고    scopus 로고
    • EM visualization of transcription by RNA polymerase II: Downstream termination requires a poly(A) signal but not transcript cleavage
    • Osheim YN, Proudfoot NJ, Beyer AL (1999) EM visualization of transcription by RNA polymerase II: Downstream termination requires a poly(A) signal but not transcript cleavage. Mol Cell 3(3):379-387.
    • (1999) Mol Cell , vol.3 , Issue.3 , pp. 379-387
    • Osheim, Y.N.1    Proudfoot, N.J.2    Beyer, A.L.3
  • 15
    • 33645844251 scopus 로고    scopus 로고
    • The role of Rat1 in coupling mRNA 3′-end processing to transcription termination: Implications for a unified allosteric-torpedo model
    • Luo W, Johnson AW, Bentley DL (2006) The role of Rat1 in coupling mRNA 3′-end processing to transcription termination: Implications for a unified allosteric-torpedo model. Genes Dev 20(8):954-965.
    • (2006) Genes Dev , vol.20 , Issue.8 , pp. 954-965
    • Luo, W.1    Johnson, A.W.2    Bentley, D.L.3
  • 16
    • 0037142086 scopus 로고    scopus 로고
    • A global analysis of Caenorhabditis elegans operons
    • Blumenthal T, et al. (2002) A global analysis of Caenorhabditis elegans operons. Nature 417(6891):851-854.
    • (2002) Nature , vol.417 , Issue.6891 , pp. 851-854
    • Blumenthal, T.1
  • 17
    • 0027935308 scopus 로고
    • The Caenorhabditis elegans locus lin-15, a negative regulator of a tyrosine kinase signaling pathway, encodes two different proteins
    • Clark SG, Lu X, Horvitz HR (1994) The Caenorhabditis elegans locus lin-15, a negative regulator of a tyrosine kinase signaling pathway, encodes two different proteins. Genetics 137(4):987-997.
    • (1994) Genetics , vol.137 , Issue.4 , pp. 987-997
    • Clark, S.G.1    Lu, X.2    Horvitz, H.R.3
  • 18
    • 0028340308 scopus 로고
    • The lin-15 locus encodes two negative regulators of Caenorhabditis elegans vulval development
    • Huang LS, Tzou P, Sternberg PW (1994) The lin-15 locus encodes two negative regulators of Caenorhabditis elegans vulval development. Mol Biol Cell 5(4):395-411.
    • (1994) Mol Biol Cell , vol.5 , Issue.4 , pp. 395-411
    • Huang, L.S.1    Tzou, P.2    Sternberg, P.W.3
  • 19
    • 0024722279 scopus 로고
    • The multivulva phenotype of certain Caenorhabditis elegans mutants results from defects in two functionally redundant pathways
    • Ferguson EL, Horvitz HR (1989) The multivulva phenotype of certain Caenorhabditis elegans mutants results from defects in two functionally redundant pathways. Genetics 123(1):109-121.
    • (1989) Genetics , vol.123 , Issue.1 , pp. 109-121
    • Ferguson, E.L.1    Horvitz, H.R.2
  • 20
    • 33646501892 scopus 로고    scopus 로고
    • Cui M, Kim EB, Han M (2006) Diverse chromatin remodeling genes antagonize the Rb-involved SynMuv pathways in C. elegans. PLoS Genet 2(5):e74.
    • Cui M, Kim EB, Han M (2006) Diverse chromatin remodeling genes antagonize the Rb-involved SynMuv pathways in C. elegans. PLoS Genet 2(5):e74.
  • 21
    • 3142615882 scopus 로고    scopus 로고
    • Recognition of RNA polymerase II carboxy-terminal domain by 3′-RNA-processing factors
    • Meinhart A, Cramer P (2004) Recognition of RNA polymerase II carboxy-terminal domain by 3′-RNA-processing factors. Nature 430(6996):223-226.
    • (2004) Nature , vol.430 , Issue.6996 , pp. 223-226
    • Meinhart, A.1    Cramer, P.2
  • 22
    • 9644310314 scopus 로고    scopus 로고
    • The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II
    • Kim M, et al. (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 432(7016):517-522.
    • (2004) Nature , vol.432 , Issue.7016 , pp. 517-522
    • Kim, M.1
  • 23
    • 33748435751 scopus 로고    scopus 로고
    • Transcription termination and nuclear degradation of cryptic unstable transcripts: A role for the nrd1-nab3 pathway in genome surveillance
    • Thiebaut M, Kisseleva-Romanova E, Rougemaille M, Boulay J, Libri D (2006) Transcription termination and nuclear degradation of cryptic unstable transcripts: A role for the nrd1-nab3 pathway in genome surveillance. Mol Cell 23(6):853-864.
    • (2006) Mol Cell , vol.23 , Issue.6 , pp. 853-864
    • Thiebaut, M.1    Kisseleva-Romanova, E.2    Rougemaille, M.3    Boulay, J.4    Libri, D.5
  • 24
    • 33748424364 scopus 로고    scopus 로고
    • Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3
    • Arigo JT, Eyler DE, Carroll KL, Corden JL (2006) Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3. Mol Cell 23(6):841-851.
    • (2006) Mol Cell , vol.23 , Issue.6 , pp. 841-851
    • Arigo, J.T.1    Eyler, D.E.2    Carroll, K.L.3    Corden, J.L.4
  • 25
    • 33750596100 scopus 로고    scopus 로고
    • RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20
    • de la Mata M, Kornblihtt AR (2006) RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20. Nat Struct Mol Biol 13(11):973-980.
    • (2006) Nat Struct Mol Biol , vol.13 , Issue.11 , pp. 973-980
    • de la Mata, M.1    Kornblihtt, A.R.2
  • 26
    • 35148860145 scopus 로고    scopus 로고
    • Serine/arginine-rich proteins contribute to negative regulator of splicing element-stimulated polyadenylation in Rous sarcoma virus
    • Maciolek NL, McNally MT (2007) Serine/arginine-rich proteins contribute to negative regulator of splicing element-stimulated polyadenylation in Rous sarcoma virus. J Virol 81(20):11208-11217.
    • (2007) J Virol , vol.81 , Issue.20 , pp. 11208-11217
    • Maciolek, N.L.1    McNally, M.T.2
  • 27
    • 0031840978 scopus 로고    scopus 로고
    • Regulation of alternative polyadenylation by U1 snRNPs and SRp20
    • Lou H, Neugebauer KM, Gagel RF, Berget SM (1998) Regulation of alternative polyadenylation by U1 snRNPs and SRp20. Mol Cell Biol 18(9):4977-4985.
    • (1998) Mol Cell Biol , vol.18 , Issue.9 , pp. 4977-4985
    • Lou, H.1    Neugebauer, K.M.2    Gagel, R.F.3    Berget, S.M.4
  • 28
    • 0027220590 scopus 로고
    • Control of cell fates in the central body region of C. elegans by the homeobox gene lin-39
    • Clark SG, Chisholm AD, Horvitz HR (1993) Control of cell fates in the central body region of C. elegans by the homeobox gene lin-39. Cell 74(1):43-55.
    • (1993) Cell , vol.74 , Issue.1 , pp. 43-55
    • Clark, S.G.1    Chisholm, A.D.2    Horvitz, H.R.3
  • 29
    • 33646515073 scopus 로고    scopus 로고
    • SynMuv genes redundantly inhibit lin-3/EGF expression to prevent inappropriate vulval induction in C. elegans
    • Cui M, et al. (2006) SynMuv genes redundantly inhibit lin-3/EGF expression to prevent inappropriate vulval induction in C. elegans. Dev Cell 10(5):667-672.
    • (2006) Dev Cell , vol.10 , Issue.5 , pp. 667-672
    • Cui, M.1
  • 30
    • 34447550769 scopus 로고    scopus 로고
    • The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3 processing and transcription termination
    • Kaneko S, Rozenblatt-Rosen O, Meyerson M, Manley JL (2007) The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3 processing and transcription termination. Genes Dev 21(14):1779-1789.
    • (2007) Genes Dev , vol.21 , Issue.14 , pp. 1779-1789
    • Kaneko, S.1    Rozenblatt-Rosen, O.2    Meyerson, M.3    Manley, J.L.4
  • 31
    • 9144264169 scopus 로고    scopus 로고
    • A map of the interactome network of the metazoan C. elegans
    • Li S, et al. (2004) A map of the interactome network of the metazoan C. elegans. Science 303(5657):540-543.
    • (2004) Science , vol.303 , Issue.5657 , pp. 540-543
    • Li, S.1
  • 32
    • 0035921929 scopus 로고    scopus 로고
    • RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts
    • Steinmetz EJ, Conrad NK, Brow DA, Corden JL (2001) RNA-binding protein Nrd1 directs poly(A)-independent 3′-end formation of RNA polymerase II transcripts. Nature 413(6853):327-331.
    • (2001) Nature , vol.413 , Issue.6853 , pp. 327-331
    • Steinmetz, E.J.1    Conrad, N.K.2    Brow, D.A.3    Corden, J.L.4
  • 33
    • 33344478052 scopus 로고    scopus 로고
    • Regulation of yeast NRD1 expression by premature transcription termination
    • Arigo JT, Carroll KL, Ames JM, Corden JL (2006) Regulation of yeast NRD1 expression by premature transcription termination. Mol Cell 21(5):641-651
    • (2006) Mol Cell , vol.21 , Issue.5 , pp. 641-651
    • Arigo, J.T.1    Carroll, K.L.2    Ames, J.M.3    Corden, J.L.4
  • 34
    • 30744467674 scopus 로고    scopus 로고
    • Nrd1 interacts with the nuclear exosome for 3′processing of RNA polymerase II transcripts
    • Vasiljeva L, Buratowski S (2006) Nrd1 interacts with the nuclear exosome for 3′processing of RNA polymerase II transcripts. Mol Cell 21(2):239-248.
    • (2006) Mol Cell , vol.21 , Issue.2 , pp. 239-248
    • Vasiljeva, L.1    Buratowski, S.2
  • 35
    • 33645226793 scopus 로고    scopus 로고
    • cis- And trans-acting determinants of transcription termination by yeast RNA polymerase II
    • Steinmetz EJ, Ng SB, Cloute JP, Brow DA (2006) cis- And trans-acting determinants of transcription termination by yeast RNA polymerase II. Mol Cell Biol 26(7):2688-2696.
    • (2006) Mol Cell Biol , vol.26 , Issue.7 , pp. 2688-2696
    • Steinmetz, E.J.1    Ng, S.B.2    Cloute, J.P.3    Brow, D.A.4
  • 36
    • 4143151952 scopus 로고    scopus 로고
    • Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization
    • Dettwiler S, Aringhieri C, Cardinale S, Keller W, Barabino SM (2004) Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization. J Biol Chem 279(34):35788-35797.
    • (2004) J Biol Chem , vol.279 , Issue.34 , pp. 35788-35797
    • Dettwiler, S.1    Aringhieri, C.2    Cardinale, S.3    Keller, W.4    Barabino, S.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.