메뉴 건너뛰기




Volumn 2, Issue 3, 2007, Pages

Adaptation of HIV-1 depends on the host-cell environment

Author keywords

[No Author keywords available]

Indexed keywords

CYAN FLUORESCENT PROTEIN; LYSINE; TYROSINE; VIRUS ENVELOPE PROTEIN; YELLOW FLUORESCENT PROTEIN;

EID: 55849104323     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0000271     Document Type: Article
Times cited : (14)

References (84)
  • 1
    • 0037165923 scopus 로고    scopus 로고
    • HIV long-term non-progressors maintain brisk CD8 T cell responses to other viral antigens
    • Valdez H, Carlson NL, Post AB, Asaad R, Heeger PS, et al. (2002) HIV long-term non-progressors maintain brisk CD8 T cell responses to other viral antigens. AIDS 16: 1113-1118.
    • (2002) AIDS , vol.16 , pp. 1113-1118
    • Valdez, H.1    Carlson, N.L.2    Post, A.B.3    Asaad, R.4    Heeger, P.S.5
  • 2
    • 0142092389 scopus 로고    scopus 로고
    • Severe CD4+T-cell depletion in gut lymphoid tissue during primary human immunodeficiency virus type 1 infection and substantial delay in restoration following highly active antiretroviral therapy
    • Guadalupe M, Reay E, Sankaran S, Prindiville T, Flamm J, et al. (2003) Severe CD4+T-cell depletion in gut lymphoid tissue during primary human immunodeficiency virus type 1 infection and substantial delay in restoration following highly active antiretroviral therapy. J Virol 77: 11708-11717.
    • (2003) J Virol , vol.77 , pp. 11708-11717
    • Guadalupe, M.1    Reay, E.2    Sankaran, S.3    Prindiville, T.4    Flamm, J.5
  • 3
    • 33747161643 scopus 로고    scopus 로고
    • Role of avidity and breadth of the CD4 T cell response in progression to AIDS
    • Korthals AH, de Boer R, Boerlijst M (2006) Role of avidity and breadth of the CD4 T cell response in progression to AIDS. Proc Biol Sci 273: 1697-1704.
    • (2006) Proc Biol Sci , vol.273 , pp. 1697-1704
    • Korthals, A.H.1    de Boer, R.2    Boerlijst, M.3
  • 4
    • 22244447444 scopus 로고    scopus 로고
    • Van Opijnen T, Berkhout B (2005) The host environment drives HIV-1 fitness. RevMed Virol 15: 219-233.
    • Van Opijnen T, Berkhout B (2005) The host environment drives HIV-1 fitness. RevMed Virol 15: 219-233.
  • 5
    • 0029967721 scopus 로고    scopus 로고
    • HIV-1 dynamics in vivo: Virion clearance rate, infected cell life-span, and viral generation time
    • Perelson AS, Neumann AU, Markowitz M, Leonard JM, Ho DD (1996) HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Science 271: 1582-1586.
    • (1996) Science , vol.271 , pp. 1582-1586
    • Perelson, A.S.1    Neumann, A.U.2    Markowitz, M.3    Leonard, J.M.4    Ho, D.D.5
  • 7
    • 0028874048 scopus 로고
    • Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection
    • Ho DD, Neumann AU, Perelson AS, Chen W, Leonard JM, et al. (1995) Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection. Nature 373: 123-126.
    • (1995) Nature , vol.373 , pp. 123-126
    • Ho, D.D.1    Neumann, A.U.2    Perelson, A.S.3    Chen, W.4    Leonard, J.M.5
  • 8
    • 0028811974 scopus 로고
    • Viral dynamics in human immunodeficiency virus type 1 infection
    • Wei X, Ghosh SK, Taylor ME, Johnson VA, Emini EA, et al. (1995) Viral dynamics in human immunodeficiency virus type 1 infection. Nature 373: 117-126.
    • (1995) Nature , vol.373 , pp. 117-126
    • Wei, X.1    Ghosh, S.K.2    Taylor, M.E.3    Johnson, V.A.4    Emini, E.A.5
  • 9
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than predicted from the fidelity of purified reverse transcriptase
    • Mansky LM, Temin HM (1995) Lower in vivo mutation rate of human immunodeficiency virus type 1 than predicted from the fidelity of purified reverse transcriptase. The Journal of Virology 69: 5087-5094.
    • (1995) The Journal of Virology , vol.69 , pp. 5087-5094
    • Mansky, L.M.1    Temin, H.M.2
  • 10
    • 0028874043 scopus 로고
    • Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance
    • Kellam P, Larder BA (1995) Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance. J Virol 69: 669-674.
    • (1995) J Virol , vol.69 , pp. 669-674
    • Kellam, P.1    Larder, B.A.2
  • 11
    • 0029973141 scopus 로고    scopus 로고
    • Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure
    • Moutouh L, Corbeil J, Richman DD (1996) Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure. Proc Natl Acad Sci U S A 93: 6106-6111.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 6106-6111
    • Moutouh, L.1    Corbeil, J.2    Richman, D.D.3
  • 12
    • 1842614352 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 subtypes have a distinct long terminal repeat that determines the replication rate in a host-cell-specific manner
    • Van Opijnen T, Jeeninga RE, Boerlijst MC, Pollakis GP, Zetterberg V, et al. (2004) Human immunodeficiency virus type 1 subtypes have a distinct long terminal repeat that determines the replication rate in a host-cell-specific manner. J Virol 78: 3675-3683.
    • (2004) J Virol , vol.78 , pp. 3675-3683
    • Van Opijnen, T.1    Jeeninga, R.E.2    Boerlijst, M.C.3    Pollakis, G.P.4    Zetterberg, V.5
  • 13
    • 3543025697 scopus 로고    scopus 로고
    • The host cell MAP kinase ERK-2 regulates viral assembly and release by phosphorylating the p6gag protein of HIV-1
    • Hemonnot B, Cartier C, Gay B, Rebuffat S, Bardy M, et al. (2004) The host cell MAP kinase ERK-2 regulates viral assembly and release by phosphorylating the p6gag protein of HIV-1. J Biol Chem 279: 32426-32434.
    • (2004) J Biol Chem , vol.279 , pp. 32426-32434
    • Hemonnot, B.1    Cartier, C.2    Gay, B.3    Rebuffat, S.4    Bardy, M.5
  • 15
    • 0035674401 scopus 로고    scopus 로고
    • Mechanisms of retroviral recombination
    • Negroni M, Buc H (2001) Mechanisms of retroviral recombination. AnnuRevGenet 35: 275-302.
    • (2001) AnnuRevGenet , vol.35 , pp. 275-302
    • Negroni, M.1    Buc, H.2
  • 17
    • 0029063822 scopus 로고
    • Biological and molecular characterization of subtype D, G, and A/ D recombinant HIV-1 transmissions in Sweden
    • Leitner T, Escanilla D, Marquina S, Wahlberg J, Brostrom C, et al. (1995) Biological and molecular characterization of subtype D, G, and A/ D recombinant HIV-1 transmissions in Sweden. Virology 209: 136-146.
    • (1995) Virology , vol.209 , pp. 136-146
    • Leitner, T.1    Escanilla, D.2    Marquina, S.3    Wahlberg, J.4    Brostrom, C.5
  • 18
    • 33144487829 scopus 로고    scopus 로고
    • Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients
    • Charpentier C, Nora T, Tenaillon O, Clavel F, Hance AJ (2006) Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients. J Virol 80: 2472-2482.
    • (2006) J Virol , vol.80 , pp. 2472-2482
    • Charpentier, C.1    Nora, T.2    Tenaillon, O.3    Clavel, F.4    Hance, A.J.5
  • 19
    • 0028228466 scopus 로고
    • Comparison of in vivo plasma and peripheral blood mononuclear cell HIV-1 quasispecies to short-term tissue culture isolates: An analysis of tat and C2-V3 env regions
    • Sabino E, Pan LZ, Cheng-Mayer C, Mayer A (1994) Comparison of in vivo plasma and peripheral blood mononuclear cell HIV-1 quasispecies to short-term tissue culture isolates: an analysis of tat and C2-V3 env regions. AIDS 8: 901-909.
    • (1994) AIDS , vol.8 , pp. 901-909
    • Sabino, E.1    Pan, L.Z.2    Cheng-Mayer, C.3    Mayer, A.4
  • 20
    • 20444366581 scopus 로고    scopus 로고
    • Evolution of human immunodeficiency virus under selection and weak recombination
    • Rouzine IM, Coffin JM (2005) Evolution of human immunodeficiency virus under selection and weak recombination. Genetics 170: 7-18.
    • (2005) Genetics , vol.170 , pp. 7-18
    • Rouzine, I.M.1    Coffin, J.M.2
  • 21
    • 27644538177 scopus 로고    scopus 로고
    • A genetic-algorithm approach to simulating human immunodeficiency virus evolution reveals the strong impact of multiply infected cells and recombination
    • Bocharov G, Ford NJ, Edwards J, Breinig T, Wain-Hobson S, et al. (2005) A genetic-algorithm approach to simulating human immunodeficiency virus evolution reveals the strong impact of multiply infected cells and recombination. J Gen Virol 86: 3109-3118.
    • (2005) J Gen Virol , vol.86 , pp. 3109-3118
    • Bocharov, G.1    Ford, N.J.2    Edwards, J.3    Breinig, T.4    Wain-Hobson, S.5
  • 22
    • 27144440023 scopus 로고    scopus 로고
    • Stochastic interplay between mutation and recombination during the acquisition of drug resistance mutations in human immunodeficiency virus type 1
    • Althaus CL, Bonhoeffer S (2005) Stochastic interplay between mutation and recombination during the acquisition of drug resistance mutations in human immunodeficiency virus type 1. J Virol 79: 13572-13578.
    • (2005) J Virol , vol.79 , pp. 13572-13578
    • Althaus, C.L.1    Bonhoeffer, S.2
  • 24
    • 0001224667 scopus 로고
    • Some genetic aspects of sex
    • Muller HJ (1932) Some genetic aspects of sex. American Naturalist 66: 118-138.
    • (1932) American Naturalist , vol.66 , pp. 118-138
    • Muller, H.J.1
  • 25
    • 0036209507 scopus 로고    scopus 로고
    • Resolving the paradox of sex and recombination
    • Otto SP, Lenormand T (2002) Resolving the paradox of sex and recombination. NatRev Genet 3: 252-261.
    • (2002) NatRev Genet , vol.3 , pp. 252-261
    • Otto, S.P.1    Lenormand, T.2
  • 27
    • 0036207383 scopus 로고    scopus 로고
    • Experimental tests of the adaptive significance of sexual recombination
    • Rice WR (2002) Experimental tests of the adaptive significance of sexual recombination. NatRev Genet 3: 241-251.
    • (2002) NatRev Genet , vol.3 , pp. 241-251
    • Rice, W.R.1
  • 28
    • 0001068043 scopus 로고
    • Evolutionin sexual and asexual populations
    • Maynard Smith J (1968) Evolutionin sexual and asexual populations. American Naturalist 102: 469-473.
    • (1968) American Naturalist , vol.102 , pp. 469-473
    • Maynard Smith, J.1
  • 29
    • 0014777407 scopus 로고
    • On the evolutionary effect of recombination
    • Eshel I, Feldman MW (1970) On the evolutionary effect of recombination. TheorPopulBiol 1: 88-100.
    • (1970) TheorPopulBiol , vol.1 , pp. 88-100
    • Eshel, I.1    Feldman, M.W.2
  • 30
    • 0026318224 scopus 로고
    • Changes in growth properties on passage in tissue culture of viruses derived from infectious molecular clones of HIV-1 LAI , HIV-1 MAL , and HIV-1 ELI
    • Peden K, Emerman M, Montagnier L (1991) Changes in growth properties on passage in tissue culture of viruses derived from infectious molecular clones of HIV-1 LAI , HIV-1 MAL , and HIV-1 ELI Virology 185: 661-672.
    • (1991) Virology , vol.185 , pp. 661-672
    • Peden, K.1    Emerman, M.2    Montagnier, L.3
  • 31
    • 0025812962 scopus 로고
    • Contribution of NF-kappa B and Sp1 binding motifs to the replicative capacity of human immunodeficiency virus type 1: Distinct patterns of viral growth are determined by T-cell types
    • Ross EK, Buckler White AJ, Rabson AB, Englund G, Martin MA (1991) Contribution of NF-kappa B and Sp1 binding motifs to the replicative capacity of human immunodeficiency virus type 1: distinct patterns of viral growth are determined by T-cell types. The Journal of Virology 65: 4350-4358.
    • (1991) The Journal of Virology , vol.65 , pp. 4350-4358
    • Ross, E.K.1    Buckler White, A.J.2    Rabson, A.B.3    Englund, G.4    Martin, M.A.5
  • 32
    • 0021719086 scopus 로고
    • Monoclonal antibody and enzymatic profiles of human malignant T-lymphoid cells and derived cell lines
    • Smith SD, Shatsky M, Cohen PS, Warnke R, Link MP, et al. (1984) Monoclonal antibody and enzymatic profiles of human malignant T-lymphoid cells and derived cell lines. Cancer Res 44: 5657-5660.
    • (1984) Cancer Res , vol.44 , pp. 5657-5660
    • Smith, S.D.1    Shatsky, M.2    Cohen, P.S.3    Warnke, R.4    Link, M.P.5
  • 33
    • 33745267732 scopus 로고    scopus 로고
    • Effects of random mutations in the Human Immunodeficiency Virus type I transcriptional promoter on viral fitness in different host-cell environments
    • in press
    • Van Opijnen T, Boerlijst MC, Berkhout (2006) Effects of random mutations in the Human Immunodeficiency Virus type I transcriptional promoter on viral fitness in different host-cell environments. J Virol, in press.
    • (2006) J Virol
    • Van Opijnen, T.1    Boerlijst, M.C.2    Berkhout3
  • 34
    • 0032553467 scopus 로고    scopus 로고
    • Experimental evolution of parasites
    • Ebert D (1998) Experimental evolution of parasites. Science 282: 1432-1435.
    • (1998) Science , vol.282 , pp. 1432-1435
    • Ebert, D.1
  • 35
    • 0023513545 scopus 로고
    • New concepts for dealing with the evolution of nucleic acids
    • Eigen M (1987) New concepts for dealing with the evolution of nucleic acids. Cold Spring HarbSympQuantBiol 52: 307-320.
    • (1987) Cold Spring HarbSympQuantBiol , vol.52 , pp. 307-320
    • Eigen, M.1
  • 37
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu YX, Li WH (1993) Statistical tests of neutrality of mutations. Genetics 133: 693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 38
    • 0033543602 scopus 로고    scopus 로고
    • Clonal interference and the evolution of RNA viruses
    • Miralles R, Gerrish PJ, Moya A, Elena SF (1999) Clonal interference and the evolution of RNA viruses. Science 285: 1745-1747.
    • (1999) Science , vol.285 , pp. 1745-1747
    • Miralles, R.1    Gerrish, P.J.2    Moya, A.3    Elena, S.F.4
  • 39
    • 0034026084 scopus 로고    scopus 로고
    • Diminishing returns of population size in the rate of RNA virus adaptation
    • Miralles R, Moya A, Elena SF (2000) Diminishing returns of population size in the rate of RNA virus adaptation. J Virol 74: 3566-3571.
    • (2000) J Virol , vol.74 , pp. 3566-3571
    • Miralles, R.1    Moya, A.2    Elena, S.F.3
  • 40
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill WG, Robertson A (1966) The effect of linkage on limits to artificial selection. GenetRes 8: 269-294.
    • (1966) GenetRes , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 41
    • 0029040245 scopus 로고
    • Linkage and the limits to natural selection
    • Barton NH (1995) Linkage and the limits to natural selection. Genetics 140: 821-841.
    • (1995) Genetics , vol.140 , pp. 821-841
    • Barton, N.H.1
  • 42
    • 2542583245 scopus 로고    scopus 로고
    • The fate of competing beneficial mutations in an asexual population
    • Gerrish PJ, Lenski RE (1998) The fate of competing beneficial mutations in an asexual population. Genetica 102-103: 127-144.
    • (1998) Genetica , vol.102-103 , pp. 127-144
    • Gerrish, P.J.1    Lenski, R.E.2
  • 43
    • 0342657165 scopus 로고    scopus 로고
    • The rate of adaptation in asexuals
    • Orr HA (2000) The rate of adaptation in asexuals. Genetics 155: 961-968.
    • (2000) Genetics , vol.155 , pp. 961-968
    • Orr, H.A.1
  • 44
    • 0038192127 scopus 로고    scopus 로고
    • Selective sweeps in the presence of interference among partially linked loci
    • Kim Y, Stephan W (2003) Selective sweeps in the presence of interference among partially linked loci. Genetics 164: 389-398.
    • (2003) Genetics , vol.164 , pp. 389-398
    • Kim, Y.1    Stephan, W.2
  • 46
    • 0030871021 scopus 로고    scopus 로고
    • The evolution of recombination: Removing the limits to natural selection
    • Otto SP, Barton NH (1997) The evolution of recombination: removing the limits to natural selection. Genetics 147: 879-906.
    • (1997) Genetics , vol.147 , pp. 879-906
    • Otto, S.P.1    Barton, N.H.2
  • 47
    • 0031902273 scopus 로고    scopus 로고
    • Selfish genes, pleiotropy and the origin of recombination
    • Hey J (1998) Selfish genes, pleiotropy and the origin of recombination. Genetics 149: 2089-2097.
    • (1998) Genetics , vol.149 , pp. 2089-2097
    • Hey, J.1
  • 48
    • 0029166841 scopus 로고
    • Muller's ratchet, epistasis and mutation effects
    • Butcher D (1995) Muller's ratchet, epistasis and mutation effects. Genetics 141: 431-437.
    • (1995) Genetics , vol.141 , pp. 431-437
    • Butcher, D.1
  • 49
    • 0034533786 scopus 로고    scopus 로고
    • On the speed of Muller's ratchet
    • Gordo I, Charlesworth B (2000) On the speed of Muller's ratchet. Genetics 156: 2137-2140.
    • (2000) Genetics , vol.156 , pp. 2137-2140
    • Gordo, I.1    Charlesworth, B.2
  • 50
    • 0029586375 scopus 로고
    • The constraints of finite size in asexual populations and the rate of the ratchet
    • Gessler DD (1995) The constraints of finite size in asexual populations and the rate of the ratchet. GenetRes 66: 241-253.
    • (1995) GenetRes , vol.66 , pp. 241-253
    • Gessler, D.D.1
  • 51
    • 0028922116 scopus 로고
    • Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness
    • Novella IS, Elena SF, Moya A, Domingo E, Holland JJ (1995) Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness. J Virol 69: 2869-2872.
    • (1995) J Virol , vol.69 , pp. 2869-2872
    • Novella, I.S.1    Elena, S.F.2    Moya, A.3    Domingo, E.4    Holland, J.J.5
  • 52
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding and selection in evolution
    • Wright S (1932) The roles of mutation, inbreeding, crossbreeding and selection in evolution. Proc Sixth Int Congress Genetics 1: 356-366.
    • (1932) Proc Sixth Int Congress Genetics , vol.1 , pp. 356-366
    • Wright, S.1
  • 53
    • 0029757751 scopus 로고    scopus 로고
    • Reduced replication of 3TC-resistant HIV-1 variants in primary cells due to a processivity defect of the reverse transcriptase enzyme
    • Back NKT, Nijhuis M, Keulen W, Boucher CAB, Oude Essink BB, et al. (1996) Reduced replication of 3TC-resistant HIV-1 variants in primary cells due to a processivity defect of the reverse transcriptase enzyme. The EMBO Journal 15: 4040-4049.
    • (1996) The EMBO Journal , vol.15 , pp. 4040-4049
    • Back, N.K.T.1    Nijhuis, M.2    Keulen, W.3    Boucher, C.A.B.4    Oude Essink, B.B.5
  • 54
    • 0026570624 scopus 로고
    • Ordered appearance of zidovudine resistance mutations during treatment of 18 human immunodeficiency virus-positive subjects
    • Boucher CAB, O'Sullivan E, Mulder JW, Ramautarsing C, Kellam P, et al. (1992) Ordered appearance of zidovudine resistance mutations during treatment of 18 human immunodeficiency virus-positive subjects. Journal of Infectious Diseases 165: 105-110.
    • (1992) Journal of Infectious Diseases , vol.165 , pp. 105-110
    • Boucher, C.A.B.1    O'Sullivan, E.2    Mulder, J.W.3    Ramautarsing, C.4    Kellam, P.5
  • 55
    • 0028323494 scopus 로고
    • Interactions between drug resistance mutations in human immunodeficiency virus type 1 reverse transcriptase
    • Larder BA (1994) Interactions between drug resistance mutations in human immunodeficiency virus type 1 reverse transcriptase. Journal of General Virology 75: 951-957.
    • (1994) Journal of General Virology , vol.75 , pp. 951-957
    • Larder, B.A.1
  • 56
    • 0029885139 scopus 로고    scopus 로고
    • Nucleotide substitution patterns can predict the requirements for drug-resistance of HIV-1 proteins
    • Keulen W, Boucher C, Berkhout B (1996) Nucleotide substitution patterns can predict the requirements for drug-resistance of HIV-1 proteins. Antiviral Research 31: 45-57.
    • (1996) Antiviral Research , vol.31 , pp. 45-57
    • Keulen, W.1    Boucher, C.2    Berkhout, B.3
  • 57
    • 0031015475 scopus 로고    scopus 로고
    • Impaired fitness of human immunodeficiency virus type 1 variants with high-level resistance to protease inhibitors
    • Croteau G, Doyon L, Thibeault D, McKercher G, Pilote L, et al. (1997) Impaired fitness of human immunodeficiency virus type 1 variants with high-level resistance to protease inhibitors. The Journal of Virology 71: 1089-1096.
    • (1997) The Journal of Virology , vol.71 , pp. 1089-1096
    • Croteau, G.1    Doyon, L.2    Thibeault, D.3    McKercher, G.4    Pilote, L.5
  • 58
    • 0031748806 scopus 로고    scopus 로고
    • Novel Gag-Pol frameshift site in Human Immunodeficiency Virus type 1 variants resistant to Protease inhibitors
    • Doyon L, Payant C, Brakier-Gingras L, Lamarre D (1998) Novel Gag-Pol frameshift site in Human Immunodeficiency Virus type 1 variants resistant to Protease inhibitors. The Journal of Virology 72: 6146-6150.
    • (1998) The Journal of Virology , vol.72 , pp. 6146-6150
    • Doyon, L.1    Payant, C.2    Brakier-Gingras, L.3    Lamarre, D.4
  • 59
    • 0031846317 scopus 로고    scopus 로고
    • Resistance-associated loss of viral fitness in human immunodeficiency virus type 1: Phenotypic analysis of Protease and gag coevolution in protease inhibitor-treated patients
    • Mammano F, Petit C, Clavel F (1998) Resistance-associated loss of viral fitness in human immunodeficiency virus type 1: phenotypic analysis of Protease and gag coevolution in protease inhibitor-treated patients. The Journal of Virology 72: 7632-7637.
    • (1998) The Journal of Virology , vol.72 , pp. 7632-7637
    • Mammano, F.1    Petit, C.2    Clavel, F.3
  • 60
    • 0035104646 scopus 로고    scopus 로고
    • Individual contributions of mutant protease and reverse transcriptase to viral infectivity, replication, and protein maturation of antiretroviral drug-resistant Human Immunodeficiency Virus type 1
    • Bleiber G, Munoz M, Ciuffi A, Meylan P, Telenti A (2001) Individual contributions of mutant protease and reverse transcriptase to viral infectivity, replication, and protein maturation of antiretroviral drug-resistant Human Immunodeficiency Virus type 1. The Journal of Virology 75: 3291-3300.
    • (2001) The Journal of Virology , vol.75 , pp. 3291-3300
    • Bleiber, G.1    Munoz, M.2    Ciuffi, A.3    Meylan, P.4    Telenti, A.5
  • 61
    • 0032869255 scopus 로고    scopus 로고
    • HIV-1 evolution under pressure of protease inhibitors, climbing the stairs of viral fitness
    • Berkhout B (1999) HIV-1 evolution under pressure of protease inhibitors, climbing the stairs of viral fitness. Journal Biomedical Science 6: 298-305.
    • (1999) Journal Biomedical Science , vol.6 , pp. 298-305
    • Berkhout, B.1
  • 62
    • 0035864943 scopus 로고    scopus 로고
    • Virologic and immunologic consequences of discontinuing combination antiretroviral-drug therapy in HIV-infected patients with detectable viremia
    • Deeks SG, Wrin T, Liegler T, Hoh R, Hayden M, et al. (2001) Virologic and immunologic consequences of discontinuing combination antiretroviral-drug therapy in HIV-infected patients with detectable viremia. The New England Journal of Medicine 344: 472-480.
    • (2001) The New England Journal of Medicine , vol.344 , pp. 472-480
    • Deeks, S.G.1    Wrin, T.2    Liegler, T.3    Hoh, R.4    Hayden, M.5
  • 63
    • 0035864854 scopus 로고    scopus 로고
    • Should patients with drug-resistant HIV-1 continue to receive antiretroviral therapy?
    • Frenkel LM, Mullins JI (2001) Should patients with drug-resistant HIV-1 continue to receive antiretroviral therapy? The New England Journal of Medicine 344: 520-522.
    • (2001) The New England Journal of Medicine , vol.344 , pp. 520-522
    • Frenkel, L.M.1    Mullins, J.I.2
  • 64
    • 3042836927 scopus 로고    scopus 로고
    • The challenge of antiretroviral-drug-resistant HIV: Is there any possible clinical advantage?
    • Zaccarelli M, Tozzi V, Perno CF, Antinori A (2004) The challenge of antiretroviral-drug-resistant HIV: is there any possible clinical advantage? CurrHIV Res 2: 283-292.
    • (2004) CurrHIV Res , vol.2 , pp. 283-292
    • Zaccarelli, M.1    Tozzi, V.2    Perno, C.F.3    Antinori, A.4
  • 65
    • 11844266617 scopus 로고    scopus 로고
    • Can modulation of viral fitness represent a target for anti-HIV-1 strategies?
    • Clementi M (2004) Can modulation of viral fitness represent a target for anti-HIV-1 strategies? New Microbiol 27: 207-214.
    • (2004) New Microbiol , vol.27 , pp. 207-214
    • Clementi, M.1
  • 66
    • 0027285372 scopus 로고
    • Rapid in vitro selection of human immunodeficiency virus type 1 resistant to 3′-thiacytidine inhibitors due to a mutation in the YMDD region of reverse transcriptase
    • Tisdale M, Kemp SD, Parry NR, Larder BA (1993) Rapid in vitro selection of human immunodeficiency virus type 1 resistant to 3′-thiacytidine inhibitors due to a mutation in the YMDD region of reverse transcriptase. Proc Natl Acad Sci U S A 90: 5653-5656.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 5653-5656
    • Tisdale, M.1    Kemp, S.D.2    Parry, N.R.3    Larder, B.A.4
  • 67
    • 0032804864 scopus 로고    scopus 로고
    • Increased fitness of drug resistant HIV-1 protease as a result of acquisition of compensatory mutations during suboptimal therapy
    • Nijhuis M, Schuurman R, de Jong D, Erickson J, Gustchina E, et al. (1999) Increased fitness of drug resistant HIV-1 protease as a result of acquisition of compensatory mutations during suboptimal therapy. AIDS 13: 2349-2359.
    • (1999) AIDS , vol.13 , pp. 2349-2359
    • Nijhuis, M.1    Schuurman, R.2    de Jong, D.3    Erickson, J.4    Gustchina, E.5
  • 68
    • 0021733694 scopus 로고
    • Deleterious mutations as an evolutionary factor. 1. The advantage of recombination
    • Kondrashov AS (1984) Deleterious mutations as an evolutionary factor. 1. The advantage of recombination. GenetRes 44: 199-217.
    • (1984) GenetRes , vol.44 , pp. 199-217
    • Kondrashov, A.S.1
  • 69
    • 4243890578 scopus 로고    scopus 로고
    • Requisite mutational load, pathway epistasis and deterministic mutation accumulation in sexual versus asexual populations
    • Rice WR (1998) Requisite mutational load, pathway epistasis and deterministic mutation accumulation in sexual versus asexual populations. Genetica 102-103: 71-81.
    • (1998) Genetica , vol.102-103 , pp. 71-81
    • Rice, W.R.1
  • 70
    • 0028222304 scopus 로고
    • The effect of background selection against deleterious mutations on weakly selected, linked variants
    • Charlesworth B (1994) The effect of background selection against deleterious mutations on weakly selected, linked variants. GenetRes 63: 213-227.
    • (1994) GenetRes , vol.63 , pp. 213-227
    • Charlesworth, B.1
  • 71
    • 0028863202 scopus 로고
    • The pattern of neutral molecular variation under the background selection model
    • Charlesworth D, Charlesworth B, Morgan MT (1995) The pattern of neutral molecular variation under the background selection model. Genetics 141: 1619-1632.
    • (1995) Genetics , vol.141 , pp. 1619-1632
    • Charlesworth, D.1    Charlesworth, B.2    Morgan, M.T.3
  • 72
    • 0028229790 scopus 로고
    • A ruby in the rubbish: Beneficial mutations, deleterious mutations and the evolution of sex
    • Peck JR (1994) A ruby in the rubbish: beneficial mutations, deleterious mutations and the evolution of sex. Genetics 137: 597-606.
    • (1994) Genetics , vol.137 , pp. 597-606
    • Peck, J.R.1
  • 73
    • 0028884070 scopus 로고
    • Possible involvement of cell fusion and viral recombination in generation of human immunodeficiency virus variants that display dual resistance to AZT and 3TC
    • Gu Z, Gao Q, Faust EA, Wainberg MA (1995) Possible involvement of cell fusion and viral recombination in generation of human immunodeficiency virus variants that display dual resistance to AZT and 3TC. J Gen Virol 76 ( Pt 10): 2601-2605.
    • (1995) J Gen Virol , vol.76 , Issue.PART 10 , pp. 2601-2605
    • Gu, Z.1    Gao, Q.2    Faust, E.A.3    Wainberg, M.A.4
  • 75
    • 0034030611 scopus 로고    scopus 로고
    • Functional differences between the LTR transcriptional promoters of HIV-1 subtypes A through G
    • Jeeninga RE, Hoogenkamp M, Armand-Ugon M, de Baar M, Verhoef K, et al. (2000) Functional differences between the LTR transcriptional promoters of HIV-1 subtypes A through G. The Journal of Virology 74: 3740-3751.
    • (2000) The Journal of Virology , vol.74 , pp. 3740-3751
    • Jeeninga, R.E.1    Hoogenkamp, M.2    Armand-Ugon, M.3    de Baar, M.4    Verhoef, K.5
  • 76
    • 0030610544 scopus 로고    scopus 로고
    • The k B sites in the Human Immunodeficiency Virus type 1 Long Terminal Repeat enhance virus replication yet are not absolutely required for viral growth
    • Chen BK, Feinberg MB, Baltimore D (1997) The k B sites in the Human Immunodeficiency Virus type 1 Long Terminal Repeat enhance virus replication yet are not absolutely required for viral growth. The Journal of Virology 71: 5495-5504.
    • (1997) The Journal of Virology , vol.71 , pp. 5495-5504
    • Chen, B.K.1    Feinberg, M.B.2    Baltimore, D.3
  • 77
    • 0141459371 scopus 로고    scopus 로고
    • Differential patterns of human cytomegalovirus gene expression in various T-cell lines carrying human T-cell leukemia-lymphoma virus type I: Role of Tax-activated cellular transcription factors
    • Beck Z, Bacsi A, Liu X, Ebbesen P, Andirko I, et al. (2003) Differential patterns of human cytomegalovirus gene expression in various T-cell lines carrying human T-cell leukemia-lymphoma virus type I: role of Tax-activated cellular transcription factors. J Med Virol 71: 94-104.
    • (2003) J Med Virol , vol.71 , pp. 94-104
    • Beck, Z.1    Bacsi, A.2    Liu, X.3    Ebbesen, P.4    Andirko, I.5
  • 78
    • 0347626096 scopus 로고    scopus 로고
    • Roscovitine inhibits STAT5 activity and induces apoptosis in the human leukemia virus type 1-transformed cell line MT-2
    • Mohapatra S, Chu B, Wei S, Djeu J, Epling-Burnette PK, et al. (2003) Roscovitine inhibits STAT5 activity and induces apoptosis in the human leukemia virus type 1-transformed cell line MT-2. Cancer Res 63: 8523-8530.
    • (2003) Cancer Res , vol.63 , pp. 8523-8530
    • Mohapatra, S.1    Chu, B.2    Wei, S.3    Djeu, J.4    Epling-Burnette, P.K.5
  • 79
    • 6044270348 scopus 로고    scopus 로고
    • Transcription factor expression in cell lines derived from natural killer-cell and natural killer-like T-cell leukemia-lymphoma
    • Matsuo Y, Drexler HG, Harashima A, Okochi A, Shimizu N, et al. (2004) Transcription factor expression in cell lines derived from natural killer-cell and natural killer-like T-cell leukemia-lymphoma. Hum Cell 17: 85-92.
    • (2004) Hum Cell , vol.17 , pp. 85-92
    • Matsuo, Y.1    Drexler, H.G.2    Harashima, A.3    Okochi, A.4    Shimizu, N.5
  • 80
    • 0027916595 scopus 로고
    • Quantitative detection of HIV-1 drug resistance mutations by automated DNA sequencing
    • Larder BA, Kohli A, Kellam P, Kemp SD, Kronick M, et al. (1993) Quantitative detection of HIV-1 drug resistance mutations by automated DNA sequencing. Nature 365: 671-673.
    • (1993) Nature , vol.365 , pp. 671-673
    • Larder, B.A.1    Kohli, A.2    Kellam, P.3    Kemp, S.D.4    Kronick, M.5
  • 81
    • 0028294049 scopus 로고
    • Molecular evolutionary genetics analysis (MEGA)
    • Kumar S, Tamura K, Nei M (1994) Molecular evolutionary genetics analysis (MEGA). ComputApplBiosc 10: 189-191.
    • (1994) ComputApplBiosc , vol.10 , pp. 189-191
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 82
    • 55849085268 scopus 로고    scopus 로고
    • Rozas J Fau-Sanchez-DelBarrio JC, Sanchez-DelBarrio Jc Fau-Messeguer X, Messeguer X Fau-Rozas R, Rozas R Dna SP () DNA polymorphism analyses by the coalescent and other methods
    • Rozas J Fau-Sanchez-DelBarrio JC, Sanchez-DelBarrio Jc Fau-Messeguer X, Messeguer X Fau-Rozas R, Rozas R Dna SP () DNA polymorphism analyses by the coalescent and other methods..
  • 83
    • 0026279651 scopus 로고    scopus 로고
    • Lenski RE, Rose MRS, S.C.Tadler SC (1991) Long-Term experimental evolution in Escherichia coli. I. Adaptation and divergence during 2,000 generations. The American Naturalist 138: 1315-1341.
    • Lenski RE, Rose MRS, S.C.Tadler SC (1991) Long-Term experimental evolution in Escherichia coli. I. Adaptation and divergence during 2,000 generations. The American Naturalist 138: 1315-1341.
  • 84
    • 0034469260 scopus 로고    scopus 로고
    • Estimating relative fitness in viral competition experiments
    • Maree AF, Keulen W, Boucher CA, de Boer RJ (2000) Estimating relative fitness in viral competition experiments. J Virol 74: 11067-11072.
    • (2000) J Virol , vol.74 , pp. 11067-11072
    • Maree, A.F.1    Keulen, W.2    Boucher, C.A.3    de Boer, R.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.