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Volumn 228, Issue 6, 2008, Pages 1029-1041

A shotgun phosphoproteomics analysis of embryos in germinated maize seeds

Author keywords

Phosphoproteomics; Phosphorylation; Shotgun; Strong cation exchange; Zea (embryo)

Indexed keywords

PHOSPHATASE; PROTEIN KINASE; VEGETABLE PROTEIN;

EID: 55849083914     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-008-0805-2     Document Type: Article
Times cited : (44)

References (51)
  • 1
    • 33751401609 scopus 로고    scopus 로고
    • Large scale identification and quantitative profiling of phosphoproteins expressed during seed filling in oilseed rape
    • GK Agrawal JJ Thelen 2007 Large scale identification and quantitative profiling of phosphoproteins expressed during seed filling in oilseed rape Mol Cell Proteomics 5 2044 2059
    • (2007) Mol Cell Proteomics , vol.5 , pp. 2044-2059
    • Agrawal, G.K.1    Thelen, J.J.2
  • 2
    • 0034003619 scopus 로고    scopus 로고
    • Spatio-temporal accumulation and activity of calcium-dependent protein kinases during embryogenesis, seed development, and germination in sandalwood
    • VS Anil AC Harmon KS Rao 2000 Spatio-temporal accumulation and activity of calcium-dependent protein kinases during embryogenesis, seed development, and germination in sandalwood Plant Physiol 122 1035 1043
    • (2000) Plant Physiol , vol.122 , pp. 1035-1043
    • Anil, V.S.1    Harmon, A.C.2    Rao, K.S.3
  • 4
    • 0031200826 scopus 로고    scopus 로고
    • Acidic phosphoprotein complex of the 60S ribosomal subunit of maize seedling roots. Components and changes in response to flooding
    • J Bailey-Serres S Vangala K Szick CH Lee 1997 Acidic phosphoprotein complex of the 60S ribosomal subunit of maize seedling roots. Components and changes in response to flooding Plant Physiol 114 1293 1305
    • (1997) Plant Physiol , vol.114 , pp. 1293-1305
    • Bailey-Serres, J.1    Vangala, S.2    Szick, K.3    Lee, C.H.4
  • 5
    • 0031420258 scopus 로고    scopus 로고
    • Seed germination and dormancy
    • JD Bewley 1997 Seed germination and dormancy Plant Cell 9 1055 1066
    • (1997) Plant Cell , vol.9 , pp. 1055-1066
    • Bewley, J.D.1
  • 7
    • 0035282334 scopus 로고    scopus 로고
    • Mammalian MAP kinase signalling cascades
    • L Chang M Karin 2001 Mammalian MAP kinase signalling cascades Nature 410 37 40
    • (2001) Nature , vol.410 , pp. 37-40
    • Chang, L.1    Karin, M.2
  • 8
    • 0141790789 scopus 로고    scopus 로고
    • The transcriptional response of Arabidopsis to genotoxic stress-a high-density colony array study (HDCA)
    • IP Chen U Haehnel L Altschmied I Schubert H Puchta 2003 The transcriptional response of Arabidopsis to genotoxic stress-a high-density colony array study (HDCA) Plant J 35 771 786
    • (2003) Plant J , vol.35 , pp. 771-786
    • Chen, I.P.1    Haehnel, U.2    Altschmied, L.3    Schubert, I.4    Puchta, H.5
  • 9
    • 33846610475 scopus 로고    scopus 로고
    • Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry
    • J Dai WH Jin QH Sheng CH Shieh JR Wu R Zeng 2007 Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry J Proteome Res 6 250 262
    • (2007) J Proteome Res , vol.6 , pp. 250-262
    • Dai, J.1    Jin, W.H.2    Sheng, Q.H.3    Shieh, C.H.4    Wu, J.R.5    Zeng, R.6
  • 10
    • 12744255015 scopus 로고    scopus 로고
    • Poly(ADP-ribose) polymerase in plants affects energy homeostasis, cell death and stress tolerance
    • M De Block C Verduyn D De Brouwer M Cornelissen 2005 Poly(ADP-ribose) polymerase in plants affects energy homeostasis, cell death and stress tolerance Plant J 41 95 106
    • (2005) Plant J , vol.41 , pp. 95-106
    • De Block, M.1    Verduyn, C.2    De Brouwer, D.3    Cornelissen, M.4
  • 12
    • 23744445987 scopus 로고    scopus 로고
    • Identification and dynamics of two classes of aurora-like kinases in Arabidopsis and other plants
    • D Demidov D Van Damme D Geelen FR Blattner A Houben 2005 Identification and dynamics of two classes of aurora-like kinases in Arabidopsis and other plants Plant Cell 17 836 848
    • (2005) Plant Cell , vol.17 , pp. 836-848
    • Demidov, D.1    Van Damme, D.2    Geelen, D.3    Blattner, F.R.4    Houben, A.5
  • 13
    • 0029379759 scopus 로고
    • Cell cycle regulation during growth-dormancy cycles in pea axillary buds
    • ML Devitt JP Stafstrom 1995 Cell cycle regulation during growth-dormancy cycles in pea axillary buds Plant Mol Biol 29 255 265
    • (1995) Plant Mol Biol , vol.29 , pp. 255-265
    • Devitt, M.L.1    Stafstrom, J.P.2
  • 15
    • 0036999943 scopus 로고    scopus 로고
    • Local and long-range signaling pathways regulating plant responses to nitrate
    • BG Forde 2002 Local and long-range signaling pathways regulating plant responses to nitrate Annu Rev Plant Biol 53 203 224
    • (2002) Annu Rev Plant Biol , vol.53 , pp. 203-224
    • Forde, B.G.1
  • 17
    • 0033835333 scopus 로고    scopus 로고
    • Sorting out the complexity of SR protein functions
    • BR Graveley 2000 Sorting out the complexity of SR protein functions RNA 6 1197 1211
    • (2000) RNA , vol.6 , pp. 1197-1211
    • Graveley, B.R.1
  • 18
    • 0032211410 scopus 로고    scopus 로고
    • Molecular cloning and characterization of maize ZmMEK1, a protein kinase with a catalytic domain homologous to mitogen- and stress-activated protein kinase kinases
    • SC Hardin SM Wolniak 1998 Molecular cloning and characterization of maize ZmMEK1, a protein kinase with a catalytic domain homologous to mitogen- and stress-activated protein kinase kinases Planta 206 577 584
    • (1998) Planta , vol.206 , pp. 577-584
    • Hardin, S.C.1    Wolniak, S.M.2
  • 19
    • 0033920066 scopus 로고    scopus 로고
    • Cellular responses to oxidative and osmotic stress: Sensing, signalling and gene expression
    • H Hirt H Asard 2000 Cellular responses to oxidative and osmotic stress: sensing, signalling and gene expression Trends Plant Sci 5 3 4
    • (2000) Trends Plant Sci , vol.5 , pp. 3-4
    • Hirt, H.1    Asard, H.2
  • 20
    • 33645468211 scopus 로고    scopus 로고
    • Quantitation of protein phosphorylation in pregnant rat uteri using stable isotope dimethyl labeling coupled with IMAC
    • SY Huang ML Tsai CJ Wu JL Hsu SH Ho SH Chen 2006 Quantitation of protein phosphorylation in pregnant rat uteri using stable isotope dimethyl labeling coupled with IMAC Proteomics 6 1722 1734
    • (2006) Proteomics , vol.6 , pp. 1722-1734
    • Huang, S.Y.1    Tsai, M.L.2    Wu, C.J.3    Hsu, J.L.4    Ho, S.H.5    Chen, S.H.6
  • 21
    • 34547130286 scopus 로고    scopus 로고
    • Nicotinamidase activity is important for germination
    • L Hunt MJ Holdsworth JE Gray 2007 Nicotinamidase activity is important for germination Plant J 51 341 351
    • (2007) Plant J , vol.51 , pp. 341-351
    • Hunt, L.1    Holdsworth, M.J.2    Gray, J.E.3
  • 22
    • 33747886382 scopus 로고    scopus 로고
    • Towards the identification of late-embryogenic-abundant phosphoproteome in Arabidopsis by 2-DE and MS
    • S Irar E Oliveira M Pagès A Goday 2006 Towards the identification of late-embryogenic-abundant phosphoproteome in Arabidopsis by 2-DE and MS Proteomics 6 S175 S185
    • (2006) Proteomics , vol.6
    • Irar, S.1    Oliveira, E.2    Pagès, M.3    Goday, A.4
  • 23
    • 0035983678 scopus 로고    scopus 로고
    • The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis
    • D Kerk J Bulgrien DW Smith B Barsam S Veretnik M Gribskov 2002 The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis Plant Physiol 129 908 925
    • (2002) Plant Physiol , vol.129 , pp. 908-925
    • Kerk, D.1    Bulgrien, J.2    Smith, D.W.3    Barsam, B.4    Veretnik, S.5    Gribskov, M.6
  • 24
    • 0035984380 scopus 로고    scopus 로고
    • New pollen-specific receptor kinases identified in tomato, maize and Arabidopsis: The tomato kinases show overlapping but distinct localization patterns on pollen tubes
    • HU Kim R Cotter S Johnson M Senda P Dodds R Kulikauska W Tang I Ezcura P Herzmark S McCormick 2002 New pollen-specific receptor kinases identified in tomato, maize and Arabidopsis: the tomato kinases show overlapping but distinct localization patterns on pollen tubes Plant Mol Biol 50 1 16
    • (2002) Plant Mol Biol , vol.50 , pp. 1-16
    • Kim, H.U.1    Cotter, R.2    Johnson, S.3    Senda, M.4    Dodds, P.5    Kulikauska, R.6    Tang, W.7    Ezcura, I.8    Herzmark, P.9    McCormick, S.10
  • 25
    • 0347985493 scopus 로고    scopus 로고
    • Regulation of Aurora-A kinase on the mitotic spindle
    • TA Kufer EA Nigg HH Sillje 2003 Regulation of Aurora-A kinase on the mitotic spindle Chromosoma 112 159 163
    • (2003) Chromosoma , vol.112 , pp. 159-163
    • Kufer, T.A.1    Nigg, E.A.2    Sillje, H.H.3
  • 26
    • 36949006710 scopus 로고    scopus 로고
    • Maize D4;1 and D5 cyclin proteins in germinating maize. Associated kinase activity and regulation by phytohormones
    • A Lara-Núñez JN De JM Vázquez-Ramos 2008 Maize D4;1 and D5 cyclin proteins in germinating maize. Associated kinase activity and regulation by phytohormones Physiol Plant 132 79 88
    • (2008) Physiol Plant , vol.132 , pp. 79-88
    • Lara-Núñez, A.1    De, J.N.2    Vázquez-Ramos, J.M.3
  • 27
    • 0346850833 scopus 로고    scopus 로고
    • The direct activation of MIK, a germinal center kinase (GCK)-like kinase, by MARK, a maize atypical receptor kinase, suggests a new mechanism for signaling through kinase-dead receptors
    • B Llompart E Castells A Rio R Roca A Ferrando V Stiefel P Puigdomenech JM Casacuberta 2003 The direct activation of MIK, a germinal center kinase (GCK)-like kinase, by MARK, a maize atypical receptor kinase, suggests a new mechanism for signaling through kinase-dead receptors J Biol Chem 278 48105 48111
    • (2003) J Biol Chem , vol.278 , pp. 48105-48111
    • Llompart, B.1    Castells, E.2    Rio, A.3    Roca, R.4    Ferrando, A.5    Stiefel, V.6    Puigdomenech, P.7    Casacuberta, J.M.8
  • 28
    • 0035839601 scopus 로고    scopus 로고
    • In vivo modifications of the maize mitochondrial small heat stress protein, HSP22
    • AA Lund DM Rhoads AL Lund RL Cerny TE Elthon 2001 In vivo modifications of the maize mitochondrial small heat stress protein, HSP22 J Biol Chem 276 29924 29929
    • (2001) J Biol Chem , vol.276 , pp. 29924-29929
    • Lund, A.A.1    Rhoads, D.M.2    Lund, A.L.3    Cerny, R.L.4    Elthon, T.E.5
  • 30
    • 34447251846 scopus 로고    scopus 로고
    • The C-terminal region of Escherichia coli MutS and protein oligomerization
    • V Miguel RJ Pezza CE Argarana 2007 The C-terminal region of Escherichia coli MutS and protein oligomerization Biochem Biophys Res Commun 360 412 417
    • (2007) Biochem Biophys Res Commun , vol.360 , pp. 412-417
    • Miguel, V.1    Pezza, R.J.2    Argarana, C.E.3
  • 32
    • 0031472138 scopus 로고    scopus 로고
    • Cloning and characterisation of MEK1, an Arabidopsis gene encoding a homologue of MAP kinase kinase
    • PC Morris D Guerrier J Leung J Giraudat 1997 Cloning and characterisation of MEK1, an Arabidopsis gene encoding a homologue of MAP kinase kinase Plant Mol Biol 35 1057 1064
    • (1997) Plant Mol Biol , vol.35 , pp. 1057-1064
    • Morris, P.C.1    Guerrier, D.2    Leung, J.3    Giraudat, J.4
  • 33
    • 0035834975 scopus 로고    scopus 로고
    • Characterization of three GLOBOSA-like MADS-box genes from maize: Evidence for ancient paralogy in one class of floral homeotic B-function genes of grasses
    • T Munster LU Wingen W Faigl S Werth H Saedler G Theissen 2001 Characterization of three GLOBOSA-like MADS-box genes from maize: evidence for ancient paralogy in one class of floral homeotic B-function genes of grasses Gene 262 1 13
    • (2001) Gene , vol.262 , pp. 1-13
    • Munster, T.1    Wingen, L.U.2    Faigl, W.3    Werth, S.4    Saedler, H.5    Theissen, G.6
  • 34
    • 0037204994 scopus 로고    scopus 로고
    • A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome
    • RJ Mural MD Adams EW Myers HO Smith GLG Miklos 2002 A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome Science 296 1661 1671
    • (2002) Science , vol.296 , pp. 1661-1671
    • Mural, R.J.1    Adams, M.D.2    Myers, E.W.3    Smith, H.O.4    Miklos, G.L.G.5
  • 35
    • 4544291080 scopus 로고    scopus 로고
    • Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database
    • TS Nuhse A Stensballe ON Jensen SC Peck 2004 Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database Plant Cell 16 2394 2405
    • (2004) Plant Cell , vol.16 , pp. 2394-2405
    • Nuhse, T.S.1    Stensballe, A.2    Jensen, O.N.3    Peck, S.C.4
  • 36
    • 33646177516 scopus 로고    scopus 로고
    • Formation of the CRS2-CAF2 group II intron splicing complex is mediated by a 22-amino acid motif in the COOH-terminal region of CAF2
    • GJ Ostheimer M Rojas H Hadjivassiliou A Barkan 2006 Formation of the CRS2-CAF2 group II intron splicing complex is mediated by a 22-amino acid motif in the COOH-terminal region of CAF2 J Biol Chem 281 4732 4738
    • (2006) J Biol Chem , vol.281 , pp. 4732-4738
    • Ostheimer, G.J.1    Rojas, M.2    Hadjivassiliou, H.3    Barkan, A.4
  • 38
    • 0017182638 scopus 로고
    • Cytological detection of poly (ADP-ribose) polymerase
    • JF Payne AK Bal 1976 Cytological detection of poly (ADP-ribose) polymerase Exp Cell Res 99 428 432
    • (1976) Exp Cell Res , vol.99 , pp. 428-432
    • Payne, J.F.1    Bal, A.K.2
  • 39
    • 0037277179 scopus 로고    scopus 로고
    • Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome
    • J Peng JE Elias CC Thoreen LJ Licklider SP Gygi 2003 Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome J Proteome Res 2 43 50
    • (2003) J Proteome Res , vol.2 , pp. 43-50
    • Peng, J.1    Elias, J.E.2    Thoreen, C.C.3    Licklider, L.J.4    Gygi, S.P.5
  • 40
    • 0035714069 scopus 로고    scopus 로고
    • Use of real-time quantitative PCR to validate the results of cDNA array and differential display PCR technologies
    • MS Rajeevan DG Ranamukhaarachchi SD Vernon ER Unger 2001 Use of real-time quantitative PCR to validate the results of cDNA array and differential display PCR technologies Methods 25 443 451
    • (2001) Methods , vol.25 , pp. 443-451
    • Rajeevan, M.S.1    Ranamukhaarachchi, D.G.2    Vernon, S.D.3    Unger, E.R.4
  • 41
    • 0034634639 scopus 로고    scopus 로고
    • A pollen-specific novel calmodulin-binding protein with tetratricopeptide repeats
    • F Safadi VS Reddy AS Reddy 2000 A pollen-specific novel calmodulin-binding protein with tetratricopeptide repeats J Biol Chem 275 35457 35470
    • (2000) J Biol Chem , vol.275 , pp. 35457-35470
    • Safadi, F.1    Reddy, V.S.2    Reddy, A.S.3
  • 42
    • 0019428163 scopus 로고
    • Effect of phosphorylation on the affinity of acidic proteins from Saccharomyces cerevisiae for the ribosomes
    • F Sanchez-Madrid FJ Vidales JP Ballesta 1981 Effect of phosphorylation on the affinity of acidic proteins from Saccharomyces cerevisiae for the ribosomes Eur J Biochem 114 609 613
    • (1981) Eur J Biochem , vol.114 , pp. 609-613
    • Sanchez-Madrid, F.1    Vidales, F.J.2    Ballesta, J.P.3
  • 43
    • 25844437437 scopus 로고    scopus 로고
    • Proteome analysis of embryo and endosperm from germinating tomato seeds
    • IS Sheoran DJ Olson AR Ross VK Sawhney 2005 Proteome analysis of embryo and endosperm from germinating tomato seeds Proteomics 5 3752 3764
    • (2005) Proteomics , vol.5 , pp. 3752-3764
    • Sheoran, I.S.1    Olson, D.J.2    Ross, A.R.3    Sawhney, V.K.4
  • 44
    • 0031432051 scopus 로고    scopus 로고
    • Signal perception and transduction: The origin of the phenotype
    • AJ Trewavas R Malho 1997 Signal perception and transduction: the origin of the phenotype Plant Cell 9 1181 1195
    • (1997) Plant Cell , vol.9 , pp. 1181-1195
    • Trewavas, A.J.1    Malho, R.2
  • 46
    • 0035831456 scopus 로고    scopus 로고
    • Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana
    • AV Vener A Harms MR Sussman RD Vierstra 2001 Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana J Biol Chem 276 6959 6966
    • (2001) J Biol Chem , vol.276 , pp. 6959-6966
    • Vener, A.V.1    Harms, A.2    Sussman, M.R.3    Vierstra, R.D.4
  • 47
    • 38949093001 scopus 로고    scopus 로고
    • The phosphoproteome of a Chlamydomonas reinhardtii eyespot fraction includes key proteins of the light signaling pathway
    • V Wagner K Ullmann A Mollwo M Kaminski M Mittag G Kreimer 2008 The phosphoproteome of a Chlamydomonas reinhardtii eyespot fraction includes key proteins of the light signaling pathway Plant Physiol 146 772 788
    • (2008) Plant Physiol , vol.146 , pp. 772-788
    • Wagner, V.1    Ullmann, K.2    Mollwo, A.3    Kaminski, M.4    Mittag, M.5    Kreimer, G.6
  • 48
    • 0017354031 scopus 로고
    • Poly (adenosine diphosphate ribose) in wheat [proceedings]
    • AJ Whitby WJ Whish 1977 Poly (adenosine diphosphate ribose) in wheat [proceedings] Biochem Soc Trans 5 948 949
    • (1977) Biochem Soc Trans , vol.5 , pp. 948-949
    • Whitby, A.J.1    Whish, W.J.2
  • 49
    • 0031278118 scopus 로고    scopus 로고
    • A developmentally regulated MAP kinase activated by hydration in tobacco pollen
    • C Wilson V Voronin A Touraev O Vicente E Heberle-Bors 1997 A developmentally regulated MAP kinase activated by hydration in tobacco pollen Plant Cell 9 2093 2100
    • (1997) Plant Cell , vol.9 , pp. 2093-2100
    • Wilson, C.1    Voronin, V.2    Touraev, A.3    Vicente, O.4    Heberle-Bors, E.5
  • 50
    • 0038561131 scopus 로고    scopus 로고
    • A method for the comprehensive proteomic analysis of membrane proteins
    • CC Wu MJ MacCoss KE Howell JR Yates 2003 A method for the comprehensive proteomic analysis of membrane proteins Nat Biotechnol 21 532 538
    • (2003) Nat Biotechnol , vol.21 , pp. 532-538
    • Wu, C.C.1    MacCoss, M.J.2    Howell, K.E.3    Yates, J.R.4
  • 51
    • 0017256641 scopus 로고
    • The ribosomal proteins of Saccharomyces cerevisiae. Phosphorylated and exchangeable proteins
    • S Zinker JR Warner 1976 The ribosomal proteins of Saccharomyces cerevisiae. Phosphorylated and exchangeable proteins J Biol Chem 251 1799 1807
    • (1976) J Biol Chem , vol.251 , pp. 1799-1807
    • Zinker, S.1    Warner, J.R.2


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