-
1
-
-
0019976445
-
The Alu family of dispersed repetitive sequences
-
Schmid CD, Jelinek WR (1982) The Alu family of dispersed repetitive sequences. Science 216: 1065-1070.
-
(1982)
Science
, vol.216
, pp. 1065-1070
-
-
Schmid, C.D.1
Jelinek, W.R.2
-
2
-
-
0142059650
-
An Alu transposition model for the origin and expansion of human segmental duplications
-
Bailey JA, Liu G, Eichler EE (2003) An Alu transposition model for the origin and expansion of human segmental duplications. Am J Hum Genet 73: 823-834.
-
(2003)
Am J Hum Genet
, vol.73
, pp. 823-834
-
-
Bailey, J.A.1
Liu, G.2
Eichler, E.E.3
-
3
-
-
0024379002
-
Newly arisen DNA repeats in primate phylogeny
-
Ryan SC, Dugaiczyk A (1989) Newly arisen DNA repeats in primate phylogeny. Proc Natl Acad Sci U S A 86: 9360-9364.
-
(1989)
Proc Natl Acad Sci U S A
, vol.86
, pp. 9360-9364
-
-
Ryan, S.C.1
Dugaiczyk, A.2
-
4
-
-
23944453340
-
Forty million years of independent evolution: A mitochondrial gene and its corresponding nuclear pseudogene in primates
-
Schmitz J, Piskurek O, Zischler H (2005) Forty million years of independent evolution: A mitochondrial gene and its corresponding nuclear pseudogene in primates. J Mol Evol 61: 1-11.
-
(2005)
J Mol Evol
, vol.61
, pp. 1-11
-
-
Schmitz, J.1
Piskurek, O.2
Zischler, H.3
-
5
-
-
0035147092
-
Biased distribution of inverted and direct Alus in the human genome: Implications for insertion, exclusion, and genome stability
-
Stenger JE, Lobachev KS, Gordenin D, Darden TA, Jurka J, et al. (2001) Biased distribution of inverted and direct Alus in the human genome: Implications for insertion, exclusion, and genome stability. Genome Res 11: 12-27.
-
(2001)
Genome Res
, vol.11
, pp. 12-27
-
-
Stenger, J.E.1
Lobachev, K.S.2
Gordenin, D.3
Darden, T.A.4
Jurka, J.5
-
6
-
-
0033019117
-
Origin and phylogenetic distribution of Alu DNA repeats: Irreversible events in the evolution of primates
-
Hamdi H, Nishio H, Zielinski R, Dugaiczyk A (1999) Origin and phylogenetic distribution of Alu DNA repeats: Irreversible events in the evolution of primates. J Mol Biol 289: 861-871.
-
(1999)
J Mol Biol
, vol.289
, pp. 861-871
-
-
Hamdi, H.1
Nishio, H.2
Zielinski, R.3
Dugaiczyk, A.4
-
7
-
-
0029834015
-
-
Zardoya R, A. M (1996) Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates. Mol Biol Evol 13: 933-942.
-
Zardoya R, A. M (1996) Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates. Mol Biol Evol 13: 933-942.
-
-
-
-
8
-
-
0037350508
-
Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome
-
Liu G, Program NCS, Zhao S, Bailey JA, Sahinalp SC, et al. (2003) Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome. Genome Res 13: 358-368.
-
(2003)
Genome Res
, vol.13
, pp. 358-368
-
-
Liu, G.1
Program, N.C.S.2
Zhao, S.3
Bailey, J.A.4
Sahinalp, S.C.5
-
9
-
-
0001603853
-
Hybridization between the nuclear and kinetoplast DNAs of Leishmania enrietti and between nuclear and mitochondrial DNAs of mouse liver
-
Du Buy HG, Riley FL (1967) Hybridization between the nuclear and kinetoplast DNAs of Leishmania enrietti and between nuclear and mitochondrial DNAs of mouse liver. Proc Natl Acad Sci U S A 57: 790-797.
-
(1967)
Proc Natl Acad Sci U S A
, vol.57
, pp. 790-797
-
-
Du Buy, H.G.1
Riley, F.L.2
-
11
-
-
0027213389
-
The mitochondrial genome on its way to the nucleus: Different stages of gene transfer in higher plants
-
Brennicke A, Grohmann L, Hiesel R, Knoop V, Schuster W (1993) The mitochondrial genome on its way to the nucleus: Different stages of gene transfer in higher plants. FEBS Lett 325: 140-145.
-
(1993)
FEBS Lett
, vol.325
, pp. 140-145
-
-
Brennicke, A.1
Grohmann, L.2
Hiesel, R.3
Knoop, V.4
Schuster, W.5
-
12
-
-
0034691074
-
Dynamic evolution of plant mitochondrial genomes: Mobile genes and introns and highly variable mutation rates
-
Palmer JD, Adams KL, Cho Y, Parkinson CL, Qiu YL, et al. (2000) Dynamic evolution of plant mitochondrial genomes: Mobile genes and introns and highly variable mutation rates. Proc Natl Acad Sci U S A 97: 6960-6966.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6960-6966
-
-
Palmer, J.D.1
Adams, K.L.2
Cho, Y.3
Parkinson, C.L.4
Qiu, Y.L.5
-
13
-
-
0043197403
-
Rates of DNA duplication and mitochondrial insertion in the human genome
-
Bensasson D, Feldman MW, Petrov DA (2003) Rates of DNA duplication and mitochondrial insertion in the human genome. J Mol Evol 57: 343-354.
-
(2003)
J Mol Evol
, vol.57
, pp. 343-354
-
-
Bensasson, D.1
Feldman, M.W.2
Petrov, D.A.3
-
14
-
-
0344564146
-
A novel mitochondrial DNA-like sequence in the human nuclear genome
-
Herrnstadt C, Clevenger W, Ghosh SS, Anderson C, Fahy E, et al. (1999) A novel mitochondrial DNA-like sequence in the human nuclear genome. Genomics 60: 67-77.
-
(1999)
Genomics
, vol.60
, pp. 67-77
-
-
Herrnstadt, C.1
Clevenger, W.2
Ghosh, S.S.3
Anderson, C.4
Fahy, E.5
-
15
-
-
0033251460
-
Nuclear pseudogenes of mitochondrial DNA as a variable part of the human genome
-
Yuan JD, Shi JX, Meng GX, An LG, Hu GX (1999) Nuclear pseudogenes of mitochondrial DNA as a variable part of the human genome. Cell Res 9: 281-290.
-
(1999)
Cell Res
, vol.9
, pp. 281-290
-
-
Yuan, J.D.1
Shi, J.X.2
Meng, G.X.3
An, L.G.4
Hu, G.X.5
-
16
-
-
0000387373
-
Nuclear integrations: Challenges for mitochondrial DNA markers
-
Zhang DX, Hewitt GM (1996) Nuclear integrations: Challenges for mitochondrial DNA markers. Trends Ecol Evol 11: 247-251.
-
(1996)
Trends Ecol Evol
, vol.11
, pp. 247-251
-
-
Zhang, D.X.1
Hewitt, G.M.2
-
17
-
-
0037309706
-
Evolutionary dynamics of large numts in the human genome: Rarity of independent insertions and abundance of post-insertion duplications
-
Hazkani-Covo E, Sorek R, Graur D (2003) Evolutionary dynamics of large numts in the human genome: Rarity of independent insertions and abundance of post-insertion duplications. J Mol Evol 56: 169-174.
-
(2003)
J Mol Evol
, vol.56
, pp. 169-174
-
-
Hazkani-Covo, E.1
Sorek, R.2
Graur, D.3
-
18
-
-
0036073133
-
Pattern of organization of human mitochondrial pseudogenes in the nuclear genome
-
Woischnik M, Moraes CT (2002) Pattern of organization of human mitochondrial pseudogenes in the nuclear genome. Genome Res 12: 885-893.
-
(2002)
Genome Res
, vol.12
, pp. 885-893
-
-
Woischnik, M.1
Moraes, C.T.2
-
19
-
-
33846094306
-
An enhanced MITOMAP with a global mtDNA mutational phylogeny
-
Ruiz-Pesini E, Lott MT, Procaccio V, Poole JC, Brandon MC, et al. (2007) An enhanced MITOMAP with a global mtDNA mutational phylogeny. Nucleic Acids Res 35: D823-D828.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Ruiz-Pesini, E.1
Lott, M.T.2
Procaccio, V.3
Poole, J.C.4
Brandon, M.C.5
-
20
-
-
0036544631
-
Rescue of a deficiency in ATP synthesis by transfer of MTATP6, a mitochondrial DNA-encoded gene, to the nucleus
-
Manfredi G, Fu J, Ojaimi J, Sadlock JE, Kwong JQ, et al. (2002) Rescue of a deficiency in ATP synthesis by transfer of MTATP6, a mitochondrial DNA-encoded gene, to the nucleus. Nat Genet 30: 394-399.
-
(2002)
Nat Genet
, vol.30
, pp. 394-399
-
-
Manfredi, G.1
Fu, J.2
Ojaimi, J.3
Sadlock, J.E.4
Kwong, J.Q.5
-
21
-
-
33845907665
-
-
Hazkani-Covo E, D. G (2007) A cComparative analysis of numt evolution in human and chimpanzee. Mol Biol Evol 24: 13-18.
-
Hazkani-Covo E, D. G (2007) A cComparative analysis of numt evolution in human and chimpanzee. Mol Biol Evol 24: 13-18.
-
-
-
-
22
-
-
0034237205
-
Organellar genes: Why do they end up in the nucleus?
-
Blanchard JL, Lynch M (2000) Organellar genes: Why do they end up in the nucleus? Trends Genet 16: 315-320.
-
(2000)
Trends Genet
, vol.16
, pp. 315-320
-
-
Blanchard, J.L.1
Lynch, M.2
-
23
-
-
0034882969
-
The human genome project reveals a continuous transfer of large mitochondrial fragments to the nucleus
-
Mourier T, Hansen AJ, Willerslev E, Arctander P (2001) The human genome project reveals a continuous transfer of large mitochondrial fragments to the nucleus. Mol Biol Evol 18: 1833-1837.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1833-1837
-
-
Mourier, T.1
Hansen, A.J.2
Willerslev, E.3
Arctander, P.4
-
24
-
-
0028363062
-
Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat
-
Lopez JV, Yuhki N, Masuda R, Modi W, O'Brien SJ (1994) Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat. J Mol Biol 39: 174-190.
-
(1994)
J Mol Biol
, vol.39
, pp. 174-190
-
-
Lopez, J.V.1
Yuhki, N.2
Masuda, R.3
Modi, W.4
O'Brien, S.J.5
-
25
-
-
0026091126
-
RNA-mediated transfer of the gene coxII from the mitochondrion to the nucleus during flowering plant evolution
-
Nugent JM, Palmer JD (1991) RNA-mediated transfer of the gene coxII from the mitochondrion to the nucleus during flowering plant evolution. Cell 66: 473-481.
-
(1991)
Cell
, vol.66
, pp. 473-481
-
-
Nugent, J.M.1
Palmer, J.D.2
-
26
-
-
0036296922
-
Structure and chromosomal distribution of human mitochondrial pseudogenes
-
Tourmen Y, Baris O, Dessen P, Jacques C, Malthiery Y, et al. (2002) Structure and chromosomal distribution of human mitochondrial pseudogenes. Genomics 80: 71-77.
-
(2002)
Genomics
, vol.80
, pp. 71-77
-
-
Tourmen, Y.1
Baris, O.2
Dessen, P.3
Jacques, C.4
Malthiery, Y.5
-
27
-
-
0037047628
-
Recent segmental duplications in the human genome
-
Bailey JA, Gu Z, Clark RA, Reinert K, Samonte RV, et al. (2002) Recent segmental duplications in the human genome. Science 297: 1003-1007.
-
(2002)
Science
, vol.297
, pp. 1003-1007
-
-
Bailey, J.A.1
Gu, Z.2
Clark, R.A.3
Reinert, K.4
Samonte, R.V.5
-
28
-
-
19344368527
-
Continued colonization of the human genome by mitochondrial DNA
-
Ricchetti M, Tekaia F, Dujon B (2004) Continued colonization of the human genome by mitochondrial DNA. PLOS Biol 2: e273.
-
(2004)
PLOS Biol
, vol.2
-
-
Ricchetti, M.1
Tekaia, F.2
Dujon, B.3
-
29
-
-
0037359926
-
Human genetic disease caused by de novo mitochondrial-nuclear DNA transfer
-
Turner C, Killoran C, Thomas NS, Rosenberg M, Chuzhanova NA, et al. (2003) Human genetic disease caused by de novo mitochondrial-nuclear DNA transfer. Hum Genet 112: 303-309.
-
(2003)
Hum Genet
, vol.112
, pp. 303-309
-
-
Turner, C.1
Killoran, C.2
Thomas, N.S.3
Rosenberg, M.4
Chuzhanova, N.A.5
-
30
-
-
33845883023
-
Paleontological evidence to date the tree of life
-
Benton MJ, Donoghue PC (2007) Paleontological evidence to date the tree of life. Mol Biol Evol 24: 26-53.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 26-53
-
-
Benton, M.J.1
Donoghue, P.C.2
-
31
-
-
0033735946
-
Estimating divergence times in the presence of an overdispersed molecular clock
-
Cutler DJ (2000) Estimating divergence times in the presence of an overdispersed molecular clock. Mol Biol Evol 17: 1647-1660.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1647-1660
-
-
Cutler, D.J.1
-
32
-
-
0028340205
-
Evidence that most Alu sequences were inserted in a process that ceased about 30 million years ago
-
Britten RJ (1994) Evidence that most Alu sequences were inserted in a process that ceased about 30 million years ago. Proc Natl Acad Sci U S A 91: 6148-6150.
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, pp. 6148-6150
-
-
Britten, R.J.1
-
33
-
-
1542682570
-
Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular LI subfamilies in ancestral primates
-
Ohshima K, Hattori M, Yada T, Gojobori T, Sakaki Y, et al. (2003) Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular LI subfamilies in ancestral primates. Genome Biol 4: R74.
-
(2003)
Genome Biol
, vol.4
-
-
Ohshima, K.1
Hattori, M.2
Yada, T.3
Gojobori, T.4
Sakaki, Y.5
-
34
-
-
0024836563
-
The population genetics of Drosophila transposable elements
-
Charlesworth B, Langley CH (1989) The population genetics of Drosophila transposable elements. Annu Rev Genet 23: 251-287.
-
(1989)
Annu Rev Genet
, vol.23
, pp. 251-287
-
-
Charlesworth, B.1
Langley, C.H.2
-
35
-
-
0033288823
-
Sure facts, speculations, and open questions about the evolution of transposable element copy number
-
Nuzhdin SV (1999) Sure facts, speculations, and open questions about the evolution of transposable element copy number. Genetica 107: 129-137.
-
(1999)
Genetica
, vol.107
, pp. 129-137
-
-
Nuzhdin, S.V.1
-
36
-
-
84871459062
-
Mammalian responses to climate change at the Paleocene-Eocene boundary: Polecat Bench record in the northern Bighorn Basin, Wyoming
-
Gingerich PD (2003) Mammalian responses to climate change at the Paleocene-Eocene boundary: Polecat Bench record in the northern Bighorn Basin, Wyoming. Geol Soc Amer 369: 463-478.
-
(2003)
Geol Soc Amer
, vol.369
, pp. 463-478
-
-
Gingerich, P.D.1
-
37
-
-
0034612238
-
Molecular evidence for a relationship between LINE-1 elements and X chromosome inactivation: The Lyon repeat hypothesis
-
Bailey JA, Carrel L, Chakravarti A, Eichler EE (2000) Molecular evidence for a relationship between LINE-1 elements and X chromosome inactivation: The Lyon repeat hypothesis. Proc Natl Acad Sci U S A 97: 6634-6639.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6634-6639
-
-
Bailey, J.A.1
Carrel, L.2
Chakravarti, A.3
Eichler, E.E.4
-
38
-
-
4644324088
-
Widespread RNA editing of embedded alu elements in the human transcriptome
-
Kim DD, Kim TT, Walsh T, Kobayashi Y, Matise TC, et al. (2004) Widespread RNA editing of embedded alu elements in the human transcriptome. Genome Res 14: 1719-1725.
-
(2004)
Genome Res
, vol.14
, pp. 1719-1725
-
-
Kim, D.D.1
Kim, T.T.2
Walsh, T.3
Kobayashi, Y.4
Matise, T.C.5
-
39
-
-
0028334711
-
Complete mitochondrial genome amplification
-
Cheng S, Higuchi R, Stoneking M (1994) Complete mitochondrial genome amplification. Nat Genet 7: 350-351.
-
(1994)
Nat Genet
, vol.7
, pp. 350-351
-
-
Cheng, S.1
Higuchi, R.2
Stoneking, M.3
-
40
-
-
0029922167
-
Isolation of human cell lines lacking mitochondrial DNA
-
King MP, Attardi G (1996) Isolation of human cell lines lacking mitochondrial DNA. Methods Enzymol 264: 304-313.
-
(1996)
Methods Enzymol
, vol.264
, pp. 304-313
-
-
King, M.P.1
Attardi, G.2
-
41
-
-
0031004203
-
Diagnosis of CMT1A duplications and HNPP deletions by interphase FISH: Implications for testing in the cytogenetics laboratory
-
Shaffer LG, Kennedy GM, Spikes AS, Lupski JR (1997) Diagnosis of CMT1A duplications and HNPP deletions by interphase FISH: Implications for testing in the cytogenetics laboratory. Am J Med Genet 69: 325-331.
-
(1997)
Am J Med Genet
, vol.69
, pp. 325-331
-
-
Shaffer, L.G.1
Kennedy, G.M.2
Spikes, A.S.3
Lupski, J.R.4
-
42
-
-
0029791627
-
The gene encoding the p60 subunit of chromatin assembly factor I (CAF1P60) maps to human chromosome 21q22.2, a region associated with some of the major features of Down syndrome
-
Katsanis N, Fisher EMC (1996) The gene encoding the p60 subunit of chromatin assembly factor I (CAF1P60) maps to human chromosome 21q22.2, a region associated with some of the major features of Down syndrome. Hum Genet 98: 497-499.
-
(1996)
Hum Genet
, vol.98
, pp. 497-499
-
-
Katsanis, N.1
Fisher, E.M.C.2
|