메뉴 건너뛰기




Volumn 10, Issue 1, 2008, Pages 81-86

Duplex - Reverse transcription - Polymerase chain reaction (D-RT-PCR)-A technique for the simultaneous detection of viruses causing sugarcane mosaic

Author keywords

Duplex Reverse Transcription Polymerase Chain Reaction (D RT PCR); Sugarcane mosaic virus (SCMV); Sugarcane streak mosaic virus (SCSMV)

Indexed keywords

RNA VIRUSES; SUGARCANE MOSAIC VIRUS; SUGARCANE STREAK MOSAIC VIRUS;

EID: 53949123954     PISSN: 09721525     EISSN: 09740740     Source Type: Journal    
DOI: 10.1007/s12355-008-0014-0     Document Type: Article
Times cited : (22)

References (49)
  • 1
    • 34247143278 scopus 로고    scopus 로고
    • Simultaneous detection of potato viruses, PLRV, PVA, PVX and PVY from dormant potato tubers by TaqMan® real-time RT-PCR
    • B.O. Agindotan P.J. Shiel P.H. Berger 2006 Simultaneous detection of potato viruses, PLRV, PVA, PVX and PVY from dormant potato tubers by TaqMan® real-time RT-PCR J Virol Methods 142 1 9
    • (2006) J Virol Methods , vol.142 , pp. 1-9
    • Agindotan, B.O.1    Shiel, P.J.2    Berger, P.H.3
  • 2
    • 35548995799 scopus 로고    scopus 로고
    • Development of a single-tube multiplex RT-PCR for the simultaneous detection of Cucumber mosaic virus and Piper yellow mottle virus associated with stunt disease of black pepper
    • A.I. Bhat S. Siju 2007 Development of a single-tube multiplex RT-PCR for the simultaneous detection of Cucumber mosaic virus and Piper yellow mottle virus associated with stunt disease of black pepper Curr Sci 93 973 976 (Pubitemid 350013944)
    • (2007) Current Science , vol.93 , Issue.7 , pp. 973-976
    • Bhat, A.I.1    Siju, S.2
  • 4
    • 21244475936 scopus 로고
    • The mosaic mottling disease of the sugarcane
    • C.A. Barber 1921 The mosaic mottling disease of the sugarcane International Sugar Journal 23 12 19
    • (1921) International Sugar Journal , vol.23 , pp. 12-19
    • Barber, C.A.1
  • 5
    • 0027745555 scopus 로고
    • Specificity, efficiency, and fidelity of PCR
    • R.S. Cha W.G. Thilly 1993 Specificity, efficiency, and fidelity of PCR PCR Methods Appl 3 S18 S29
    • (1993) PCR Methods Appl , vol.3
    • Cha, R.S.1    Thilly, W.G.2
  • 8
    • 32044463593 scopus 로고    scopus 로고
    • Optimization and application of a multiplex RT-PCR system for simultaneous detection of five potato viruses using 18S rRNA as an internal control
    • DOI 10.1094/PD-90-0185
    • Z.Y. Du J. S. Chen C. Hiruki 2006 Optimization and application of a multiplex RT-PCR system for simultaneous detection of five potato viruses using 18s rRNA as an internal control Pl Dis 90 185 189 (Pubitemid 43199232)
    • (2006) Plant Disease , vol.90 , Issue.2 , pp. 185-189
    • Du, Z.1    Chen, J.2    Hiruki, C.3
  • 9
    • 0033790518 scopus 로고    scopus 로고
    • Multiplex PCR: Optimization and application in diagnostic virology
    • DOI 10.1128/CMR.13.4.559-570.2000
    • E.M. Elnifro A.M. Ahsshi R.J. Cooper P.E. Klapper 2000 Multipleplex PCR: optimization and application in diagnostic virology Clin Microbiol Rev 13 559 570 (Pubitemid 30782010)
    • (2000) Clinical Microbiology Reviews , vol.13 , Issue.4 , pp. 559-570
    • Elnifro, E.M.1    Ashshi, A.M.2    Cooper, R.J.3    Klapper, P.E.4
  • 10
    • 0038385765 scopus 로고    scopus 로고
    • Molecular characterization of a distinct potyvirus from whitegrass in China
    • Z. Fan H. Chen S. Cai C. Deng W. Wang X. Liang H. Li 2003 Molecular characterization of a distinct Potyvirus from whitegrass in China Arch Virol 148 1219 1224 (Pubitemid 36720316)
    • (2003) Archives of Virology , vol.148 , Issue.6 , pp. 1219-1224
    • Fan, Z.1    Chen, H.2    Cai, S.3    Deng, C.4    Wang, W.5    Liang, X.6    Li, H.7
  • 11
    • 0346146949 scopus 로고    scopus 로고
    • Molecular Characterization of Sugarcane Mosaic Virus Isolate from North Eastern Region of India
    • R.K. Gaur M. Singh G.P. Rao 2003 Molecular characterization of Sugarcane mosaic virus isolate from North Eastern Region of India Sugar Tech 5 3 149 153 (Pubitemid 37519222)
    • (2003) Sugar Tech , vol.5 , Issue.3 , pp. 149-153
    • Gaur, R.K.1    Singh, M.2    Rao, G.P.3
  • 12
    • 33745784124 scopus 로고    scopus 로고
    • Identification and molecular characterization of Sugarcane streak mosaic virus in North India
    • R.K. Gaur M. Singh A. Singh L.C. Mishra G.P. Rao 2006 Identification and molecular characterization of Sugarcane streak mosaic virus in North India Sugarcane International 24 2 13 17
    • (2006) Sugarcane International , vol.24 , Issue.2 , pp. 13-17
    • Gaur, R.K.1    Singh, M.2    Singh, A.3    Mishra, L.C.4    Rao, G.P.5
  • 13
    • 0039781127 scopus 로고
    • Identification of Sugarcane mosaic virus and characterization of strains of the virus from Pakistan, Iran and Cameroon
    • A.G. Gillaspie Jr R.G. Mock F.F. Smith 1978 Identification of Sugarcane mosaic virus and characterization of strains of the virus from Pakistan, Iran and Cameroon Proc. Int. Soc. Sugar Cane Technol 16 347 355
    • (1978) Proc. Int. Soc. Sugar Cane Technol , vol.16 , pp. 347-355
    • Gillaspie Jr, A.G.1    Mock, R.G.2    Smith, F.F.3
  • 14
    • 0035984629 scopus 로고    scopus 로고
    • The complete sequence of the genome of Cocksfoot streak virus (CSV), a grass infecting Potyvirus
    • R. Gotz E. Maiss 2002 The complete sequence of the genome of Cocksfoot streak virus (CSV), a grass infecting Potyvirus Arch Virol 147 1573 1583
    • (2002) Arch Virol , vol.147 , pp. 1573-1583
    • Gotz, R.1    Maiss, E.2
  • 15
    • 0032782521 scopus 로고    scopus 로고
    • Multiplex reverse transcriptase-polymerase chain reaction applied to virus detection in globe artichoke
    • DOI 10.1046/j.1439-0434.1999.147003183.x
    • F. Grieco D. Gallitelli 1999 Multiplex reverse transcriptase polymerase chain reaction applied to virus detection in globe artichoke J Phytopathol 147 183 185 (Pubitemid 29373149)
    • (1999) Journal of Phytopathology , vol.147 , Issue.3 , pp. 183-185
    • Grieco, F.1    Gallitelli, D.2
  • 17
    • 0028035911 scopus 로고
    • Strains of sorghum mosaic virus causing sugarcane mosaic in Louisiana
    • M.P. Grisham 1994 Strains of Sorghum mosaic virus causing sugarcane mosaic in Louisiana Plant Dis 78 729 732 (Pubitemid 2119527)
    • (1994) Plant Disease , vol.78 , Issue.7 , pp. 729-732
    • Grisham, M.P.1
  • 18
    • 0032233760 scopus 로고    scopus 로고
    • Molecular Cloning, Sequencing, and Phylogenetic Relationships of a New Potyvirus: Sugarcane Streak Mosaic Virus, and a Reevaluation of the Classification of the Potyviridae
    • DOI 10.1006/mpev.1998.0535, PII S1055790398905358
    • J.S. Hall B. Adams T.J. Parsons R. French L.C. Lane S.G. Jensen 1998 Molecular cloning, sequencing, and phylogenetic relationships of a new Potyvirus: Sugarcane mosaic virus, and a reevaluation of the classification of the Potyviridae Mol Phylogen Evol 10 323 332 (Pubitemid 128350295)
    • (1998) Molecular Phylogenetics and Evolution , vol.10 , Issue.3 , pp. 323-332
    • Hall, J.S.1    Adams, B.2    Parsons, T.J.3    French, R.4    Lane, L.C.5    Jensen, S.G.6
  • 19
    • 0038724021 scopus 로고    scopus 로고
    • Development of recombinant coat protein antibody based IC-RT-PCR for detection and discrimination of sugarcane streak mosaic virus isolates from Southern India
    • DOI 10.1007/s00705-003-0015-y
    • M. Hema N. Kirth P. Sreenivasulu H.S. Savithri 2003 Development of recombinant coat protein antibody based IC-RT-PCR for detection and discrimination of Sugarcane streak mosaic virus isolates from South India Arch Virol 148 1185 1193 (Pubitemid 36720313)
    • (2003) Archives of Virology , vol.148 , Issue.6 , pp. 1185-1193
    • Hema, M.1    Kirthi, N.2    Sreenivasulu, P.3    Savithri, H.S.4
  • 20
    • 0011048873 scopus 로고    scopus 로고
    • Biological, antigenic and genomic relationships among the virus isolates causing mosaic disease of sugarcane in South India
    • M. Hema M. Venkatramana H.S. Savithri P. Sreenivasulu 1999 Biological, antigenic and genomic relationships among the virus isolates causing mosaic disease of sugarcane in South India Curr Sci 77 698 702 (Pubitemid 129558417)
    • (1999) Current Science , vol.77 , Issue.5 , pp. 698-702
    • Hema, M.1    Venkatramana, M.2    Savithri, H.S.3    Sreenivasulu, P.4
  • 21
    • 0003816029 scopus 로고    scopus 로고
    • Development of a multiplex immunocapture RT-PCR assay for detection and differentiation of tomato and tobacco mosaic tobamoviruses
    • DOI 10.1016/S0166-0934(98)00086-X, PII S016609349800086X
    • V. Jacobi G.D. Bachand R.C. Hamelin J.D. Castello 1998 Development of a multiplex immunocapture RT-PCR assay for detection and differentiation of tomato and tobacco mosaic tobamoviruses J Virol Methods 74 167 178 (Pubitemid 29023129)
    • (1998) Journal of Virological Methods , vol.74 , Issue.2 , pp. 167-178
    • Jacobi, V.1    Bachand, G.D.2    Hamelin, R.C.3    Castello, J.D.4
  • 22
    • 0032704891 scopus 로고    scopus 로고
    • A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay
    • DOI 10.1016/S0166-0934(99)00078-6, PII S0166093499000786
    • D. James 1999 A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay J Virol Methods 83 1 9 (Pubitemid 29528538)
    • (1999) Journal of Virological Methods , vol.83 , Issue.1-2 , pp. 1-9
    • James, D.1
  • 24
    • 0029170645 scopus 로고
    • Sugarcane mosaic virus-an important pathogen on maize in Yugoslavia
    • B. Krstic M. Tosic 1995 Sugarcane mosaic virus-an important pathogen on maize in Yugoslavia J Plant Dis Prot 102 34 39
    • (1995) J Plant Dis Prot , vol.102 , pp. 34-39
    • Krstic, B.1    Tosic, M.2
  • 26
    • 0034056944 scopus 로고    scopus 로고
    • Differentiation of Poaceae potyviruses by reverse transcription- polymerase chain reaction and restriction analysis
    • DOI 10.1046/j.1439-0434.2000.00473.x
    • V. Marie-Jeanne R. Loos J. Peyre B. Alliot P. Signoret 2000 Differentiation of Poaceae Potyviruses by reverse transcription polymerase chain reaction and restriction analysis J Phytopathol 148 141 151 (Pubitemid 30231089)
    • (2000) Journal of Phytopathology , vol.148 , Issue.3 , pp. 141-151
    • Marie-Jeanne, V.1    Ioos, R.2    Peyre, J.3    Alliot, B.4    Signoret, P.5
  • 27
    • 0013433538 scopus 로고
    • Confirmation that the sugarcane mosaic virus subgroup consists of four distinct potyviruses by using peptide profiles of coat proteins
    • N.M. Mckern D.D. Shukla R.D. Toler S.G. Jensen M. Tosic R.E. Ford O. Leon C.W. Ward 1991 Confirmation that the sugarcane mosaic virus subgroup consists of four distinct potyviruses by using peptide profiles of coat proteins Phytopathology 81 1025 1029
    • (1991) Phytopathology , vol.81 , pp. 1025-1029
    • McKern, N.M.1    Shukla, D.D.2    Toler, R.D.3    Jensen, S.G.4    Tosic, M.5    Ford, R.E.6    Leon, O.7    Ward, C.W.8
  • 28
    • 0028181841 scopus 로고
    • Sensitive detection of grapevine virus A, B, or leafroll-associated III from viruliferous mealybugs and infected tissue by cDNA amplification
    • DOI 10.1016/0166-0934(94)90076-0
    • A. Minafra A. Hadidi 1994 Sensitive detection of grapevine virus A, B or leafroll-associated virus III from viruliferous mealybugs and infected tissue J Virol Methods 47 175 187 (Pubitemid 24142017)
    • (1994) Journal of Virological Methods , vol.47 , Issue.1-2 , pp. 175-187
    • Minafra, A.1
  • 29
    • 0033822897 scopus 로고    scopus 로고
    • Improved RNA extraction and one-tube RT-PCR assay for simultaneous detection of control plant RNA plus several viruses in plant extracts
    • DOI 10.1016/S0166-0934(00)00211-1, PII S0166093400002111
    • A. Nassuth E. Pollari K. Helmeczy S. Stewart S.A. Kofalvi 2000 Improved RNA extraction and one-tube RT-PCR assay for simultaneous detection of control plant RNA plus several viruses in plant extracts J Virol Method 90 37 49 (Pubitemid 30697046)
    • (2000) Journal of Virological Methods , vol.90 , Issue.1 , pp. 37-49
    • Nassuth, A.1    Pollari, E.2    Helmeczy, K.3    Stewart, S.4    Kofalvi, S.A.5
  • 30
    • 0034972561 scopus 로고    scopus 로고
    • RT-PCR for detecting five distinct Tospovirus species using degenerate primers and dsRNA template
    • DOI 10.1016/S0166-0934(01)00321-4, PII S0166093401003214
    • M. Okuda K. Hanada 2001 RT-PCR for detecting five distinct Tospovirus species using degenerate primers and dsRNA template J Virol Methods 96 149 156 (Pubitemid 32607535)
    • (2001) Journal of Virological Methods , vol.96 , Issue.2 , pp. 149-156
    • Okuda, M.1    Hanada, K.2
  • 31
    • 0036803377 scopus 로고    scopus 로고
    • Simultaneous and co-operational amplification (Co-PCR): A new concept for detection of plant viruses
    • DOI 10.1016/S0166-0934(02)00132-5, PII S0166093402001325
    • A. Olmos E. Bertolini M. Cambra 2002 Simultaneous and co-operational amplification (Co-PCR): a new concept for detection of plant viruses J Virol Methods 106 51 59 (Pubitemid 35279649)
    • (2002) Journal of Virological Methods , vol.106 , Issue.1 , pp. 51-59
    • Olmos, A.1    Bertolini, E.2    Cambra, M.3
  • 32
    • 53949096136 scopus 로고    scopus 로고
    • Sensitive detection of potato viruses, PVX, PLRV and PVS, by RT-PCR in potato leaf and tuber
    • M. Peiman C. Xie 2006 Sensitive detection of potato viruses, PVX, PLRV and PVS, by RT-PCR in potato leaf and tuber Australasian Pl Dis Notes 1 41 46
    • (2006) Australasian Pl Dis Notes , vol.1 , pp. 41-46
    • Peiman, M.1    Xie, C.2
  • 34
    • 33745787037 scopus 로고    scopus 로고
    • Distribution of sugarcane mosaic and sugarcane streak mosaic virus in India
    • G.P. Rao M. Chatenet J.G. Girard P. Rott 2006 Distribution of Sugarcane mosaic and Sugarcane streak mosaic virus in India Sugar Tech 8 1 79 81 (Pubitemid 44020700)
    • (2006) Sugar Tech , vol.8 , Issue.1 , pp. 79-81
    • Rao, G.P.1    Chatenet, M.2    Girard, J.G.3    Rott, P.4
  • 35
    • 0012200871 scopus 로고
    • Purification and electron microscopy and serology of strains A and F of Sugarcane mosaic virus
    • N. Rishi S. Rishi 1985 Purification and electron microscopy and serology of strains A and F of Sugarcane mosaic virus Ind J Virol 1 79 86
    • (1985) Ind J Virol , vol.1 , pp. 79-86
    • Rishi, N.1    Rishi, S.2
  • 36
    • 24044523651 scopus 로고    scopus 로고
    • A multiplex polymerase chain reaction method for reliable, sensitive and simultaneous detection of multiple viruses in citrus trees
    • DOI 10.1016/j.jviromet.2005.05.008, PII S0166093405001606
    • A. Roy A. Fayad G. Barthe R.H. Brlansky 2005 A multiplex polymerase chain reaction method for reliable, sensitive and simultaneous detection of multiple viruses in citrus trees J Virol Methods 129 47 55 (Pubitemid 41224771)
    • (2005) Journal of Virological Methods , vol.129 , Issue.1 , pp. 47-55
    • Roy, A.1    Fayad, A.2    Barthe, G.3    Brlansky, R.H.4
  • 37
    • 0032722836 scopus 로고    scopus 로고
    • Comparison of PLRV and PVY detection in potato seed samples tested by Florida winter field inspection and RT-PCR
    • P. Russo L. Miller R.P. Singh S.A. Slack 1999 Comparison of PLRV and PVY detection in potato seed samples tested by Florida winter field inspection and RT-PCR Am J Potato Res 76 313 316 (Pubitemid 29506639)
    • (1999) American Journal of Potato Research , vol.76 , Issue.5 , pp. 313-316
    • Russo, P.1    Miller, L.2    Singh, R.P.3    Slack, S.A.4
  • 38
    • 0033679171 scopus 로고    scopus 로고
    • Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridization and multiplex reverse-transcription polymerase chain reaction
    • M. Saade F. Aparicio J.A. Sanchez-Navarro M.C. Herranz A.M.B. Di-Terlizzi V. Pallas 2000 Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridization and multiplex reverse-transcription polymerase chain reaction Phytopathology 90 1330 1336 (Pubitemid 30949646)
    • (2000) Phytopathology , vol.90 , Issue.12 , pp. 1330-1336
    • Saade, M.1    Aparicio, F.2    Sanchez-Navarro, J.A.3    Herranz, M.C.4    Myrta, A.5    Di Terlizzi, B.6    Pallas, V.7
  • 41
    • 0001503080 scopus 로고
    • Taxonomy of Potyvirus infecting maize, sorghum and sugarcane in Australia and United States as determined by reactivities of polyclonal antibodies directed towards virus specific N-termini of coat proteins
    • D.D. Shukla M. Tosic J. Jilka R.E. Ford R.W. Taker M.A.C. Langham 1989 Taxonomy of Potyvirus infecting maize, sorghum and sugarcane in Australia and United States as determined by reactivities of polyclonal antibodies directed towards virus specific N-termini of coat proteins Phytopathology 79 223 229
    • (1989) Phytopathology , vol.79 , pp. 223-229
    • Shukla, D.D.1    Tosic, M.2    Jilka, J.3    Ford, R.E.4    Taker, R.W.5    Langham, M.A.C.6
  • 42
  • 43
    • 21244477464 scopus 로고    scopus 로고
    • Progressive decline in yield and quality of sugarcane due to Sugarcane mosaic virus
    • V. Singh O.K. Sinha R. Kumar 2003 Progressive decline in yield and quality of sugarcane due to Sugarcane mosaic virus Indian Phytopathol 56 500 502
    • (2003) Indian Phytopathol , vol.56 , pp. 500-502
    • Singh, V.1    Sinha, O.K.2    Kumar, R.3
  • 44
    • 0038306625 scopus 로고    scopus 로고
    • Multiple virus and viroid detection and strain separation via multiplex reverse transcription - Polymerase chain reaction
    • R.P. Singh X. Nie 2003 Multiplex virus and viroid detection and strain separation via multiplex reverse transcription polymerase chain reaction Can J Pl Pathol 25 127 134 (Pubitemid 36820985)
    • (2003) Canadian Journal of Plant Pathology , vol.25 , Issue.2 , pp. 127-134
    • Singh, R.P.1    Nie, X.2
  • 45
    • 0029941681 scopus 로고    scopus 로고
    • Detection of stylet-borne and circulative potato viruses in aphids by duplex reverse transcription polymerase chain reaction
    • DOI 10.1016/0166-0934(96)02043-5
    • R.P. Singh J. Kurz G. Boiteau 1996 Detection of stylet-borne and circulative potato viruses in aphids by duplex reverse transcription polymerase chain reaction J Virol Methods 59 189 196 (Pubitemid 26189360)
    • (1996) Journal of Virological Methods , vol.59 , Issue.1-2 , pp. 189-196
    • Singh, R.P.1    Kurz, J.2    Boiteau, G.3
  • 46
    • 0028052416 scopus 로고
    • Detection of sugarcane mosaic virus and Fiji disease virus in diseased sugarcane using the polymerase chain reaction
    • G.R. Smith R. Van de Velde 1994 Detection of Sugarcane mosaic virus and Fiji disease virus in diseased sugarcane using the polymerase chain reaction Pl Dis 78 557 561 (Pubitemid 2099716)
    • (1994) Plant Disease , vol.78 , Issue.6 , pp. 557-561
    • Smith, G.R.1    Van De Velde, R.2
  • 47
    • 21244466811 scopus 로고    scopus 로고
    • Impact of mosaic infection on growth and yield of sugarcane
    • R. Viswanathan M. Balamuralikrishnan 2005 Impact of mosaic infection on growth and yield of sugarcane Sugar Tech 7 1 61 65 (Pubitemid 40886015)
    • (2005) Sugar Tech , vol.7 , Issue.1 , pp. 61-65
    • Viswanathan, R.1    Balamuralikrishnan, M.2
  • 48
    • 43049095424 scopus 로고    scopus 로고
    • Sugarcane mosaic in India: A cause of combined infection of Sugarcane mosaic virus and Sugarcane streak mosaic virus
    • R. Viswanathan M. Balamuralikrishnan R. Karuppaiah 2007 Sugarcane mosaic in India: A cause of combined infection of Sugarcane mosaic virus and Sugarcane streak mosaic virus Sugarcane International 25 2 6 14
    • (2007) Sugarcane International , vol.25 , Issue.2 , pp. 6-14
    • Viswanathan, R.1    Balamuralikrishnan, M.2    Karuppaiah, R.3
  • 49
    • 0030867178 scopus 로고    scopus 로고
    • Sequence and relationships of sugarcane mosaic and sorghum mosaic virus strains and development of RT-PCR-based RFLPS for strain discrimination
    • Z.N. Yang T.E. Mirkov 1997 Sequence and relationship of sugarcane mosaic and sorghum mosaic virus strains and development of RT-PCR based RFLPS for strain discrimination Phytopathology 87 932 939 (Pubitemid 27372577)
    • (1997) Phytopathology , vol.87 , Issue.9 , pp. 932-939
    • Yang, Z.N.1    Mirkov, T.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.