Gene expression profiling in hepatic tissue of newly weaned pigs fed pharmacological zinc and phytase supplemented diets

BMC Genomics

Volumn 9, Issue , 2008, Pages

  Martínez Montemayor, Michelle M ^a,d   Hill, Gretchen M ^d   Raney, Nancy E ^d   Rilington, Valencia D ^d   Tempelman, Robert J ^d   Link, Jane E ^b,d   Wilkinson, Christopher P ^b,d   Ramos, Antonio M ^c,d   Ernst, Catherine W ^d  

^a SCHOOL OF MEDICINE   (Puerto Rico)

^b University of Texas at Austin   (United States)

^c WAGENINGEN UNIVERSITY   (Netherlands)

^d MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; AMINOACYLASE; CARBOXYPEPTIDASE B; GLUTATHIONE TRANSFERASE; GLUTATHIONE TRANSFERASE M4; GLYOXALASE; HEAT SHOCK PROTEIN 70; MESSENGER RNA; OLIGONUCLEOTIDE; OROSOMUCOID; PEROXIREDOXIN; PHYTASE; UNCLASSIFIED DRUG; ZINC OXIDE; ZINC;

AMINO ACID METABOLISM; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CELL FUNCTION; CONTROLLED STUDY; DETOXIFICATION; DIET SUPPLEMENTATION; DRUG EFFECT; DRUG MECHANISM; DRUG POTENTIATION; EXPRESSED SEQUENCE TAG; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; GENETIC TRANSCRIPTION; LIVER; MICROARRAY ANALYSIS; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATIVE STRESS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ANALYSIS; SEQUENCE HOMOLOGY; TISSUE SECTION; ANIMAL; METABOLISM; MOLECULAR GENETICS; SWINE; WEANING;

SUIDAE;

6-PHYTASE; ANIMALS; DIETARY SUPPLEMENTS; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; LIVER; MOLECULAR SEQUENCE DATA; OXIDATIVE STRESS; SWINE; WEANING; ZINC;

EID: 53749101270     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-421     Document Type: Article

References (71)

1. Junghans P Kaehne T Beyer M Metges CC Schwerin M Dietary protein-related changes in hepatic transcription correspond to modifications in hepatic protein expression in growing pigs J Nutr 2004, 134:43-47. 14704291
2. Hesketh JE Vasconcelos MH Bermano G Regulatory signals in messenger RNA: determinants of nutrient-gene interaction and metabolic compartmentation Br J Nutr 1998, 80:307-321. 9924273
3. Falchuk KH The molecular basis for the role of zinc in developmental biology Mol Cell Biochem 1998, 188:41-48. 9823009
4. Andreini C Banci L Bertini I Rosato A Counting the zinc-proteins encoded in the human genome J Proteome Res 2006, 5:196-201. 16396512
5. Kagi RHJ Evolution, structure and chemical activity of class I metallothioneins: Overview Metallothioneins III Switzerland: Birkhauser Verlag Basel Suzuki KT, Imura N, Kimura M 1993:29-56.
6. Richards MP Cousins RJ Mammalian zinc homeostasis requirement for RNA and metallothionein synthesis Biochem Biophys Res Comm 1975, 64:1215-1223. 1137597
7. Prassad A Zinc in Human Health: Effect of Zinc on Immune Cells Mol Med 2008, 14:353-357. 2277319 18385818
8. Harland BF Morris ER Phytate: A good or a bad food component Nutr Res 1995, 15:733-754.
9. Davies NT Nightingale R The effects of phytate on intestinal absorption and secretion of zinc, and whole-body retention of zinc, copper, iron and manganese in rats Br J Nutr 1975, 34:243-258. 1174496
10. Lei X Ku PK Miller EW Ullrey DE Yokoyama M Supplemental microbial phytase improves bioavailability of dietary zinc to weanling pigs J Nutr 1993, 123:1117-1123. 8389400
11. Martínez MM Hill GM Link JE Raney NE Tempelman RJ Ernst CW Pharmacological zinc and phytase supplementation enhance metallothionein mRNA abundance and protein concentration in newly weaned pigs J Nutr 2004, 134:538-544. 14988443
12. Adeola O Lawrence B Sutton A Cline T Phytase-induced changes in mineral utilization in zinc-supplemented diets for pigs J Anim Sci 1995, 73:3384-3391. 8586598
13. Cromwell GL Coffey MT Monegue HJ Randolph JH Efficacy of low-activity, microbial phytase in improving the bioavailability of phosphorus in corn-soybean meal diets for pigs J Anim Sci 1995, 73:449-456. 7601778
14. Sandberg AS Hulthen LR Turk M Dietary Aspergillus niger phytase increases iron absorption in humans J Nutr 1996, 126:476-480. 8632221
15. Bhutta ZA Bird SM Black RE Brown KH Gardner JM Hidayat A Therapeutic effects of oral zinc in acute and persistent diarrhea in children in developing countries: Pooled analysis of randomized controlled trials Am J Clin Nutr 2000, 72:1516-1522. 11101480
16. Rosado JL López P Muñoz E Martinez H Allen LH Zinc supplementation reduced morbidity, but neither zinc nor iron supplementation affected growth or body composition of Mexican preschoolers Am J Clin Nutr 1997, 65:13-19. 8988907
17. Boulay M Scott ME Conly SL Stevenson MM Koski KG Dietary protein and zinc restrictions independently modify a Heligmosomoides polygyrus (Nematoda) infection in mice Parasitology 1998, 116(Pt 5):449-62. 9614328
18. Hill GM Cromwell GL Crenshaw TD Dove CR Ewan RC Knabe DA Lewis AJ Libal GW Mahan DC Shurson GC Southern LL Veum TL Growth promotion effects and plasma changes from feeding high dietary concentrations of zinc and copper to weanling pigs (regional study) J Anim Sci 2000, 78:1010-1016. 10784192
19. Carlson MS Hill GM Link JE Early- and traditionally weaned nursery pigs benefit from phase-feeding pharmacological concentrations of zinc oxide: effect on metallothionein and mineral concentrations J Anim Sci 1999, 77:1199-1207. 10340587
20. Jin DY Chae HZ Rhee SG Jeang KT Regulatory role for a novel human thioredoxin peroxidase in Nf-κB activation J Biol Chem 1997, 272:30952-30961. 9388242
21. Ranganathan S Ciaccio PJ Walsh ES Tew KD Genomic sequence of human glyoxalase-I: Analysis of promoter activity and its regulation Gene 1999, 240:149-155. 10564821
22. Mitta M Ohnogi H Yamamoto A Kato I Sakiyama F Tsunasawa S The primary structure of porcine aminoacylase 1 deduced from cDNA sequence J Biochem 1992, 112:737-742. 1284246
23. Liang P Pardee AB Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction Science 1992, 257:967-971. 1354393
24. Cousins RJ Blanchard RK Moore JB Cui L Green CL Liuzzi JP Cao J Bobo JA Regulation of zinc metabolism and genomic outcomes J Nutr 2003, 133:1521S-1526S. 12730457
25. Stein J Liang P Differential display technology: A general guide Cell Mol Life Sci 2002, 59:1235-1240. 12363026
26. Gallagher BM Phelan SA Investigating transcriptional regulation of PRDX6 in mouse liver cells Free Radic Biol Med 2007, 42:1270-1277. 17382207
27. Sakurai A Hara S Okano N Kondo Y Inoue J Imura N Regulatory role of metallothionein in NF-[kappa]B activation FEBS Letters 1999, 455:55-58. 10428471
28. Zhou Z Wang L Song Z Saari JT McClain CJ Kang YJ Abrogation of nuclear factor-kappaB activation is involved in zinc inhibition of lipopolysaccharide-induced tumor necrosis factor-alpha production and liver injury Am J Pathol 2004, 164:1547-1556. 1615672 15111301
29. Kim CH Kim JH Lee J Ahn YS Zinc-induced NF-κB inhibition can be modulated by changes in the intracellular metallothionein level Toxicol Appl Pharmacol 2003, 190:189-196. 12878048
30. Uzzo RG Crispen PL Golovine K Makhov P Horwitz EM Kolenko VM Diverse effects of zinc on NF-κB and AP-1 transcription factors: implications for prostate cancer progression Carcinogenesis 2006, 27:1980-1990. 16606632
31. Roselli M Finamore A Garaguso I Britti MS Mengheri E Zinc oxide protects cultured enterocytes from the damage induced by Escherichia coli J Nutr 2003, 133:4077-4082. 14652351
32. Creighton DJ Hamilton DS Brief history of glyoxalase I and what we have learned about metal ion-dependent, enzyme catalyzed isomerizations Arch Biochem Biophys 2001, 387:1-10. 11368170
33. Creighton DJ Migliorini M Pourmotabbed T Guha MK Optimization of efficiency in the glyoxalase pathway Biochemistry 1988, 27(19):7376-84. 3207683
34. Brambilla G Sciaba L Faggin P Finollo R Bassi AM Ferro M Marinari UM Methylglyoxal-induced DNA-protein cross-links and cytotoxicity in Chinese hamster ovary cells Carcinogenesis 1985, 6:683-686. 4006054
35. Stuart GW Searle PF Cen HY Brinster RL Palmiter RD A 12-base-pair DNA motif that is repeated several times in metallothionein gene promoters confers metal regulation to a heterologous gene Proc Natl Acad Sci USA 1984, 81:7318-7322. 392137 6095286
36. Radtke F Heuchel R Georgiev O Hergersberg M Gariglio M Dembic Z Schaffner W Cloned transcription factor MTF-1 activates the mouse metallothionein I promoter EMBO J 1993, 12:1355-1362. 413347 8467794
37. Ho E Ames BN Low intracellular zinc induces oxidative DNA damage, disrupts p53, NFkappaB and AP1 binding and affects DNA repair in a rat glioma cell line Proc Natl Acad Sci USA 2002, 99:16770-16775. 139219 12481036
38. Denson J Xi Z Wu Y Yang W Neale G Zhang J Screening for inter-individual splicing differences in human GSTM4 and the discovery of a single nucleotide substitution related to the tandem skipping of two exons Gene 2006, 379:148-155. 16854533
39. tom Dieck H Döring F Roth HP Daniel H Changes in rat hepatic gene expression in response to zinc deficiency as assessed by DNA arrays J Nutr 2003, 133:1004-1010. 12672911
40. Wong KL Klaassen CD Relationship between liver and kidney levels of glutathione and metallothionein in rats Toxicology 1981, 19:39-47. 7222057
41. Haïdara K Moffatt P Denizeau F Metallothionein induction attenuates the effects of glutathione depletors in rat hepatocytes Toxicol Sci 1999, 49:297-305. 10416275
42. Har-El R Chevion M Zinc (II) protects against meta-mediated free radical induced damage: Studies on single and double-strand DNA breakage Free Radic Res Commun 1990, 12-13:509-515.
43. Imai J Yashiroda H Maruya M Yahara I Tanaka K Proteasomes and molecular chaperones: Cellular machinery responsible for folding and destruction of unfolded proteins Cell Cycle 2003, 2:585-590. 14512774
44. Bernardini C Zannoni A Turba ME Fantinati P Tamanini C Bacci ML Forni M Heat shock protein 70, heat shock protein 32, and vascular endothelial growth factor production and their effects on lipopolysaccharide-induced apoptosis in porcine aortic endothelial cells Cell Stress Chaperones 2005, 10:340-348. 1283877 16333987
45. Hatayama T Hayakawa M Differential temperature dependency of chemical stressors in HSF1-mediated stress response in mammalian cells Biochem Biophys Res Commun 1999, 265:763-769. 10600494
46. Higashi T Takechi H Uemura Y Kikuchi H Nagata K Differential induction of mRNA species encoding several classes of stress proteins following focal cerebral ischemia in rats Brain Res 1994, 650:239-248. 7953688
47. Soti C Csermely P Aging and molecular chaperones Exp Gerontol 2003, 38(10):1037-40. 14580856
48. Lindner H Hopfner S Tafler-Naumann M Miko M Konrad L Rohm KH The distribution of aminoacylase I among mammalian species and localization of the enzyme in porcine kidney Biochimie 2000, 82:129-137. 10727768
49. Giardina T Biagini A Dalle Ore F Ferre E Reynier M Puigserver A The hog intestinal mucosa acylase I: Subcellular localization, isolation, kinetic studies and biological function Biochimie 1997, 79:265-273. 9258435
50. Loffler HG Rohm KH Schneider F Studies on metal ion dependence, kinetics and SH (S-S) groups of acylaminoacid aminohydrolase Zinc Enzymes Boston: Birkhauser Bertini I, Luchinat C, Maret W, Zeppezauer M 1986:281-288.
51. Heese D Berger S Rohm KH Nuclear magnetic relaxation studies of the role of the metal ion in Mn+2-substituted aminoacylase I Eur J Biochem 1990, 188:175-180. 2318199
52. Dente L Human alpha-1-acid glycoprotein genes Prog Clin Biol Res 1989, 300:85-98. 2674976
53. Tan AK Eaton DL Activation and characterization of procarboxypeptidase B from human plasma Biochemistry 1995, 34:5811-5816. 7727441
54. Lampreave F Pineiro A The major serum protein of fetal and newborn pigs: biochemical properties and identification as a fetal form of alpha 1-acid glycoprotein Int J Biochem 1984, 16:47-53. 6698287
55. Son DS Shimoda M Kokve E Implication of altered levels of plasma alpha (1)-acid glycoprotein and its derived sialic acid on plasma protein binding of trimethoprim in pigs in physiological and pathological states Vet Q 1996, 18:10-13. 8833605
56. Stone RT Maurer RA Cloning and developmental regulation of alpha 1 acid glycoprotein in swine Dev Genet 1987, 8:295-304. 3502976
57. Mackiewicz A Dewey MJ Berger FG Baumann H Acute phase mediated change in glycosylation of rat α1-acid glycoprotein in transgenic mice Glycobiology 1991, 1:265-269. 1794039
58. Cooper R Eckley DM Papaconstantinou J Nucleotide sequence of the mouse alpha 1-acid glycoprotein gene 1 Biochemistry 1987, 26:5244-5250. 3676251
59. Yiangou M Ge X Carter K Papaconstantinou J Induction of several acute-phase protein genes by heavy metals: A new class of metal-responsive genes Biochemistry 1991, 30:3798-3806. 1707669
60. Hendriks D Scharpé S van Sande M Lommaert MP Characterization of a carboxypeptidase in human serum distinct from carboxypeptidase N J Clin Chem Clin Biochem 1989, 27:277-285. 2760564
61. Bouma BN Marx PF Mosnier LO Meijers JCM Thrombin-Activatable Fibrinolysis Inhibitor (TAFI, Plasma Procarboxypeptidase B, Procarboxypeptidase R, Procarboxypeptidase U) Thromb Res 2001, 101:329-354. 11297751
62. Eaton DL Malloy BE Tsai SP Henzel W Drayna D Isolation, molecular cloning, and partial characterization of a novel carboxypeptidase B from human plasma J Biol Chem 1991, 266:21833-21838. 1939207
63. Schatteman KA Goossens FJ Scharpe SS Hendriks D Activation of plasma carboxypeptidase U in different mammalian species points to a conserved pathway of inhibition of fibrinolysis Thromb Haemost 1999, 82:1718-1721. 10613660
64. Wang W Boffa PB Bajzar L Walker JB Nesheim ME A study of the mechanism of inhibition of fibrinolysis by activated thrombin-activatable fibrinolysis inhibitor J Biol Chem 1998, 273:27176-27181. 9765237
65. Wesolowski SR Raney NE Ernst CW Developmental changes in the fetal pig transcriptome Physiol Genomics 2004, 16:268-274. 14726603
66. Zhao SH Recknor J Lunney JK Nettleton D Kuhar D Orley S Tuggle CK Validation of a first-generation long-oligonucleotide microarray for transcriptional profiling in the pig Genomics 2005, 86:618-625. 16216716
67. Smyth GK Limma: Linear models for microarray data Bioinformatics and Computational Biology Solutions Using R and Bioconductor New York: Springer Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W 2005:397-420.
68. Livak KJ Schmittgen TD Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method Methods 2001, 25:402-408. 11846609
69. SAS Systems The SAS System for Windows, version 9.1.3 SAS Institute, Inc., Cary, NC 2007.
70. Satterthwaite FE An approximate distribution of estimates of variance components Biometrics Bull 1946, 2:110-114.
71. Poehlman ET Reduced metabolic rate after caloric restriction-can we agree on how to normalize the data? J Clin Endocrinol Metab 2003, 88:14-15. 12519820