메뉴 건너뛰기




Volumn 379, Issue 1-2, 2006, Pages 148-155

Screening for inter-individual splicing differences in human GSTM4 and the discovery of a single nucleotide substitution related to the tandem skipping of two exons

Author keywords

Glutathione S transferase; Polymorphism; Skipping; Splicing; Tandem

Indexed keywords

COMPLEMENTARY DNA; ENZYME; GLUTATHIONE S TRANSFERASE M4; UNCLASSIFIED DRUG;

EID: 33747342207     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2006.05.012     Document Type: Article
Times cited : (13)

References (28)
  • 1
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul S.F., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 3
    • 0031021397 scopus 로고    scopus 로고
    • Structure, catalytic mechanism, and evolution of the glutathione transferases
    • Armstrong R.N. Structure, catalytic mechanism, and evolution of the glutathione transferases. Chem. Res. Toxicol. 10 (1997) 2-18
    • (1997) Chem. Res. Toxicol. , vol.10 , pp. 2-18
    • Armstrong, R.N.1
  • 4
    • 0036048429 scopus 로고    scopus 로고
    • Meta- and pooled analyses of the effects of glutathione S-transferase M1 polymorphisms and smoking on lung cancer risk
    • Benhamou S., et al. Meta- and pooled analyses of the effects of glutathione S-transferase M1 polymorphisms and smoking on lung cancer risk. Carcinogenesis 23 (2002) 1343-1350
    • (2002) Carcinogenesis , vol.23 , pp. 1343-1350
    • Benhamou, S.1
  • 5
    • 0028895417 scopus 로고
    • Exon recognition in vertebrate splicing
    • Berget S.M. Exon recognition in vertebrate splicing. J. Biol. Chem. 270 (1995) 2411-2414
    • (1995) J. Biol. Chem. , vol.270 , pp. 2411-2414
    • Berget, S.M.1
  • 6
    • 0032429154 scopus 로고    scopus 로고
    • A DNA polymorphism discovery resource for research on human genetic variation
    • Collins F.S., Brooks L.D., and Chakravarti A. A DNA polymorphism discovery resource for research on human genetic variation. Genome Res. 8 (1998) 1229-1231
    • (1998) Genome Res. , vol.8 , pp. 1229-1231
    • Collins, F.S.1    Brooks, L.D.2    Chakravarti, A.3
  • 7
    • 0027182019 scopus 로고
    • Isolation and analysis of the gene and cDNA for a human Mu class glutathione S-transferase, GSTM4
    • Comstock K.E., Johnson K.J., Rifenbery D., and Henner W.D. Isolation and analysis of the gene and cDNA for a human Mu class glutathione S-transferase, GSTM4. J. Biol. Chem. 268 (1993) 16958-16965
    • (1993) J. Biol. Chem. , vol.268 , pp. 16958-16965
    • Comstock, K.E.1    Johnson, K.J.2    Rifenbery, D.3    Henner, W.D.4
  • 8
    • 0028245964 scopus 로고
    • A comparison of the enzymatic and physicochemical properties of human glutathione transferase M4-4 and three other human Mu class enzymes
    • Comstock K.E., Widersten M., Hao X.Y., Henner W.D., and Mannervik B. A comparison of the enzymatic and physicochemical properties of human glutathione transferase M4-4 and three other human Mu class enzymes. Arch. Biochem. Biophys. 311 (1994) 487-495
    • (1994) Arch. Biochem. Biophys. , vol.311 , pp. 487-495
    • Comstock, K.E.1    Widersten, M.2    Hao, X.Y.3    Henner, W.D.4    Mannervik, B.5
  • 9
    • 0034908554 scopus 로고    scopus 로고
    • Nomenclature for the description of human sequence variations
    • den Dunnen J.T., and Antonarakis S.E. Nomenclature for the description of human sequence variations. Hum. Genet. 109 (2001) 121-124
    • (2001) Hum. Genet. , vol.109 , pp. 121-124
    • den Dunnen, J.T.1    Antonarakis, S.E.2
  • 10
    • 0037100373 scopus 로고    scopus 로고
    • Pooled analysis and meta-analysis of glutathione S-transferase M1 and bladder cancer: a HuGE review
    • Engel L.S., et al. Pooled analysis and meta-analysis of glutathione S-transferase M1 and bladder cancer: a HuGE review. Am. J. Epidemiol. 156 (2002) 95-109
    • (2002) Am. J. Epidemiol. , vol.156 , pp. 95-109
    • Engel, L.S.1
  • 11
    • 0037106544 scopus 로고    scopus 로고
    • Cloning and expression of a novel Mu class murine glutathione transferase isoenzyme
    • Guo J., Zimniak L., Zimniak P., Orchard J.L., and Singh S.V. Cloning and expression of a novel Mu class murine glutathione transferase isoenzyme. Biochem. J. 366 (2002) 817-824
    • (2002) Biochem. J. , vol.366 , pp. 817-824
    • Guo, J.1    Zimniak, L.2    Zimniak, P.3    Orchard, J.L.4    Singh, S.V.5
  • 13
    • 0035071598 scopus 로고    scopus 로고
    • Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression
    • Kuehl P., et al. Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression. Nat. Genet. 27 (2001) 383-391
    • (2001) Nat. Genet. , vol.27 , pp. 383-391
    • Kuehl, P.1
  • 14
    • 0037439397 scopus 로고    scopus 로고
    • Nonsense mediated decay downregulates conserved alternatively spliced ABCC4 transcripts bearing nonsense codons
    • Lamba J.K., et al. Nonsense mediated decay downregulates conserved alternatively spliced ABCC4 transcripts bearing nonsense codons. Hum. Mol. Genet. 12 (2003) 99-109
    • (2003) Hum. Mol. Genet. , vol.12 , pp. 99-109
    • Lamba, J.K.1
  • 15
    • 0037246718 scopus 로고    scopus 로고
    • ASAP: the Alternative Splicing Annotation Project
    • Lee C., Atanelov L., Modrek B., and Xing Y. ASAP: the Alternative Splicing Annotation Project. Nucleic Acids Res. 31 (2003) 101-105
    • (2003) Nucleic Acids Res. , vol.31 , pp. 101-105
    • Lee, C.1    Atanelov, L.2    Modrek, B.3    Xing, Y.4
  • 16
    • 0036021719 scopus 로고    scopus 로고
    • A T2517C polymorphism in the GSTM4 gene is associated with risk of developing lung cancer
    • Liloglou T., Walters M., Maloney P., Youngson J., and Field J.K. A T2517C polymorphism in the GSTM4 gene is associated with risk of developing lung cancer. Lung Cancer 37 (2002) 143-146
    • (2002) Lung Cancer , vol.37 , pp. 143-146
    • Liloglou, T.1    Walters, M.2    Maloney, P.3    Youngson, J.4    Field, J.K.5
  • 17
    • 0035949674 scopus 로고    scopus 로고
    • A computational analysis of sequence features involved in recognition of short introns
    • Lim L.P., and Burge C.B. A computational analysis of sequence features involved in recognition of short introns. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 11193-11198
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 11193-11198
    • Lim, L.P.1    Burge, C.B.2
  • 18
    • 0030872838 scopus 로고    scopus 로고
    • PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing
    • Nickerson D.A., Tobe V.O., and Taylor S.L. PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing. Nucleic Acids Res. 25 (1997) 2745-2751
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2745-2751
    • Nickerson, D.A.1    Tobe, V.O.2    Taylor, S.L.3
  • 19
    • 0033932053 scopus 로고    scopus 로고
    • Two linked mutations in transcriptional regulatory elements of the CYP3A5 gene constitute the major genetic determinant of polymorphic activity in humans
    • Paulussen A., et al. Two linked mutations in transcriptional regulatory elements of the CYP3A5 gene constitute the major genetic determinant of polymorphic activity in humans. Pharmacogenetics 10 (2000) 415-424
    • (2000) Pharmacogenetics , vol.10 , pp. 415-424
    • Paulussen, A.1
  • 20
    • 0029009677 scopus 로고
    • Using information content and base frequencies to distinguish mutations from genetic polymorphisms in splice junction recognition sites
    • Rogan P.K., and Schneider T.D. Using information content and base frequencies to distinguish mutations from genetic polymorphisms in splice junction recognition sites. Hum. Mutat. 6 (1995) 74-76
    • (1995) Hum. Mutat. , vol.6 , pp. 74-76
    • Rogan, P.K.1    Schneider, T.D.2
  • 21
    • 0031880376 scopus 로고    scopus 로고
    • Information analysis of human splice site mutations
    • Rogan P.K., Faux B.M., and Schneider T.D. Information analysis of human splice site mutations. Hum. Mutat. 12 (1998) 153-171
    • (1998) Hum. Mutat. , vol.12 , pp. 153-171
    • Rogan, P.K.1    Faux, B.M.2    Schneider, T.D.3
  • 22
    • 0027296348 scopus 로고
    • Molecular cloning and heterologous expression of an alternatively spliced human Mu class glutathione S-transferase transcript
    • Ross V.L., and Board P.G. Molecular cloning and heterologous expression of an alternatively spliced human Mu class glutathione S-transferase transcript. Biochem. J. 294 Pt 2 (1993) 373-380
    • (1993) Biochem. J. , vol.294 , Issue.PART 2 , pp. 373-380
    • Ross, V.L.1    Board, P.G.2
  • 23
    • 0031583033 scopus 로고    scopus 로고
    • Information content of individual genetic sequences
    • Schneider T.D. Information content of individual genetic sequences. J. Theor. Biol. 189 (1997) 427-441
    • (1997) J. Theor. Biol. , vol.189 , pp. 427-441
    • Schneider, T.D.1
  • 24
    • 0035173378 scopus 로고    scopus 로고
    • dbSNP: the NCBI database of genetic variation
    • Sherry S.T., et al. dbSNP: the NCBI database of genetic variation. Nucleic Acids Res. 29 (2001) 308-311
    • (2001) Nucleic Acids Res. , vol.29 , pp. 308-311
    • Sherry, S.T.1
  • 25
    • 3042600930 scopus 로고    scopus 로고
    • Polymorphism of human mu class glutathione transferases
    • Tetlow N., Robinson A., Mantle T., and Board P. Polymorphism of human mu class glutathione transferases. Pharmacogenetics 14 (2004) 359-368
    • (2004) Pharmacogenetics , vol.14 , pp. 359-368
    • Tetlow, N.1    Robinson, A.2    Mantle, T.3    Board, P.4
  • 26
    • 2042445716 scopus 로고    scopus 로고
    • Ex vivo analysis of aberrant splicing induced by two donor site mutations in PKLR of a patient with severe pyruvate kinase deficiency
    • Wijk R., van Wesel A.C., Thomas A.A., Rijksen G., and van Solinge W.W. Ex vivo analysis of aberrant splicing induced by two donor site mutations in PKLR of a patient with severe pyruvate kinase deficiency. Br. J. Haematol. 125 (2004) 253-263
    • (2004) Br. J. Haematol. , vol.125 , pp. 253-263
    • Wijk, R.1    van Wesel, A.C.2    Thomas, A.A.3    Rijksen, G.4    van Solinge, W.W.5
  • 27
    • 23244443123 scopus 로고    scopus 로고
    • Distribution of exonic splicing enhancer elements in human genes
    • Wu Y., Zhang Y., and Zhang J. Distribution of exonic splicing enhancer elements in human genes. Genomics 86 (2005) 329-336
    • (2005) Genomics , vol.86 , pp. 329-336
    • Wu, Y.1    Zhang, Y.2    Zhang, J.3
  • 28
    • 0027409870 scopus 로고
    • Deduced amino acid sequence, gene structure and chromosomal location of a novel human class Mu glutathione S-transferase, GSTM4
    • Zhong S., Spurr N.K., Hayes J.D., and Wolf C.R. Deduced amino acid sequence, gene structure and chromosomal location of a novel human class Mu glutathione S-transferase, GSTM4. Biochem. J. 291 Pt 1 (1993) 41-50
    • (1993) Biochem. J. , vol.291 , Issue.PART 1 , pp. 41-50
    • Zhong, S.1    Spurr, N.K.2    Hayes, J.D.3    Wolf, C.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.