Gene Cloning and Expression in Molecular Colonies

Cell-Free Protein Synthesis: Methods and Protocols

Volumn , Issue , 2008, Pages 191-206

  Chetverin, Alexander B ^a   Samatov, Timur R ^a   Chetverina, Helena V ^a  

^a INSTITUTE OF PROTEIN RESEARCH   (Russian Federation)

Author keywords

Cell free biotechnology; Expression in molecular colonies; Gene cloning; Molecular colony protocols; Molecular colony technique; Role of thiol compounds; Transcription; Translation

Indexed keywords

EID: 53249089421     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9783527622702.ch11     Document Type: Chapter

References (55)

1. Khorana, H. G., in Nobel Lectures, Physiology or Medicine 1963-1970, Elsevier, Amsterdam, 1972.
2. Kelly, T. J., Jr., Smith, H. O., J. Mol. Biol. 1970, 51, 393-409.
3. Weiss, B., Richardson, C. C., Proc. Natl. Acad. Sci. U.S.A. 1967, 57, 1021-1028.
4. Saiki, R. K., Gelfand, D. H., Stoffel, Scharf, S. J., Higuchi, R., Horn, G. T., Mullis, K. B., Erlich, H. A., Science 1988, 239, 487-491.
5. Chetverina, H. V., Chetverin, A. B., Nucleic Acids Res. 1993, 21, 2349-2353.
6. Chetverin, A. B.,Chetverina, H. V., Russian Federation Pat. 2,048,522, 1995.
7. Chetverin, A. B., Chetverina, H. V., U.S. Pat. 5,616,478, 1997.
8. Chetverin, A. B., Chetverina, H. V., Munishkin, A. V., J. Mol. Biol. 1991, 222, 3-9.
9. Hill, D., Blumenthal, T., Nature 1983, 301, 350-352.
10. Sumper, M., Luce, R., Proc. Natl. Acad. Sci. U.S.A. 1975, 72, 162-166.
11. Biebricher, C. K., Eigen, M., Luce, R., Nature 1986, 321, 89-91.
12. Chetverin, A. B., FEBS Lett. 2004, 567, 35-41.
13. Chetverin, A. B., Chetverina, H. V., Demidenko, A. A., Ugarov, V. I., Cell 1997, 88, 503-513.
14. Chetverin, A. B., Spirin, A. S., Prog. Nucleic Acid Res. Mol. Biol. 1995, 51, 225-270.
15. Morozov, I. Yu., Ugarov, V. I., Chetverin, A. B., Spirin, A. S., Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 9325-9329.
16. Chetverina, H. V., Demidenko, A. A., Ugarov, V. I., Chetverin, A. B., FEBS Lett. 1999, 450, 89-94.
17. Guatelli, J. C.,Whitfield, K. M., Kwoh, D. Y., Barringer, K. J., Richman, D. D., Gingeras, T. R., Proc. Natl. Acad. Sci. U.S.A. 1990, 87, 1874-1878.
18. Compton, J., Nature 1991, 350, 91-92.
19. Walker, G. T., Little,M. C., Nadeau, J. G., Shank, D. D., Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 392-396.
20. Fire, A., Xu, S.-Q., Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 4641-4645.
21. Notomi, T., Okayama, H., Masubuchi, H., Yonekawa, T., Watanabe, K., Amino, N., Hase, T., Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000, 28, e63.
22. Mitra, R. D., Church, G. M., Nucleic Acids Res. 1999, 27, e34.
23. Boles, T. C., Kron, S. J., Adams, C. P., U.S. Pat. 5,932,711, 1999.
24. Chetverina, H. V., Samatov, T. R., Ugarov, V. I., Chetverin, A. B., BioTechniques 2002, 33, 150-156.
25. Mitra, R. D., Butty, V. L., Shendure, J., Williams, B. R., Housman, D. E., Church, G. M., Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 5926-5931.
26. Merritt, J., DiTonno, J. R., Mitra, R. D., Church, G. M., Edwards, J. S., Nucleic Acids Res. 2003, 31, e84.
27. Butz, J., Wickstrom, E., Edwards, J., BMC Biotechnol. 2003, 3, 11.
28. Mikkilineni, V., Mitra, R. D., Merritt, J., DiTonno, J. R., Church, G. M., Ogunnaike, B., Edwards, J. S., Biotechnol. Bioeng. 2004, 86, 117-124.
29. Butz, J. A., Roberts, K. G., Edwards, J. S., Biotechnol. Prog. 2004, 20, 1836-1839.
30. Butz, J. A., Yan,H., Mikkilineni, V., Edwards, J. S., BMC Genetics 2004, 5, 3.
31. Merritt, J., Ogunnaike, B. A., Edwards, J. S., Biotechnol Bioeng. 2005, 92, 519-531.
32. Mitra, R. D., Shendure, J., Olejnik, J., Olejnik, E. K., Church, G. M., Anal. Biochem., 2003, 320, 55-65.
33. Zhu, J., Shendure, J., Mitra, R. D., Church, G. M., Science 2003, 301, 836-838.
34. Chetverina, H. V., Falaleeva, M. V., Chetverin, A. B., Anal. Biochem., 2004, 334, 376-381.
35. Samatov, T. R., Chetverina, H. V., Chetverin, A. B., Nucleic Acids Res. 2005, 33, e145.
36. Vogelstein, B., Kinzler, K. W., Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 9236-9241.
37. Chetverin, A. B., Kramer, F. R., Bio/Technology 1994, 12, 1093-1100.
38. Brenner, S., Williams, S. R., Vermaas, E.H., Storck, T., Moon, K., McCollum, C., Mao, J.-I., Luo, S., Kirchner, J. J., Eletr, S., DuBridge, R. B., Burcham, T., Albrecht, G., Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 1665-1670.
39. Sepp, A., Tawfik, D. S., Griffiths, A. D., FEBS Lett. 2002, 532, 455-458.
40. Dressman, D., Yan, H., Traverso, G., Kinzler, K. W., Vogelstein, B., Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 8817-8822.
41. Dabrowski, S., Kur, J., Protein Expr. Purif. 1998, 14, 131-138.
42. Sambrook, J., Russell, D. W., Molecular Cloning, 3rd edn., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 2001.
43. Devine, J. H., Kutuzova, G. D., Green, V. A., Ugarova, N. N., Baldwin, T. O., Biochim. Biophys. Acta 1993, 1173, 121-132.
44. Chomczynski, P., Sacchi, N., Analyt. Biochem. 1987, 162, 156-159.
45. Alberts, B., Bray,D., Lewis, J., Raff,M., Roberts, K., Watson, J. D., Molecular Biology of the Cell, 3rd edn., Garland, New York, 1994.
46. Roberts, R. W., Ja, W. W., Curr. Opin. Struct. Biol. 1999, 9, 521-529.
47. Shaloiko, L. A., Granovsky, I. E., Ivashina, T. V., Ksenzenko, V. N., Shirokov, V. A., Spirin, A. S., Biotechnol. Bioeng. 2004, 88, 730-739.
48. Cormack, B. P., Valdivia, R. H., Falkow, S., Gene 1996, 173, 33-38.
49. Illarionov, B. A., Bondar, V. S., Illarionova, V. A., Vysotski, E. S., Gene 1995, 153, 273-274.
50. Timmer, R. T., Benkowski, L. A., Schodin, D., Lax, S. R.,Metz, A. M., Ravel, J. M., Browning, K. S., J. Biol. Chem. 1993, 268, 9504-9510.
51. Erickson, A. H., Blobel, G., Methods Enzymol. 1983, 96, 38-50.
52. Cody, C. W., Prasher, D. C., Westler, W.M., Prendergast, F. G.,Ward, W. W., Biochemistry 1993, 32, 1212-1218.
53. Lizardi, P. M., Huang, X., Zhu, Z., Bray-Ward, P., Thomas, D. C., Ward, D. C., Nat. Genet. 1998, 19, 225-232.
54. Shimizu, Y., Inoue, A., Tomari, Y., Suzuki, T., Yokogawa, T., Nishikawa, K., Ueda, T., Nat. Biotechnol. 2001, 19, 751-755.
55. Roche Applied Science, Taq DNA Polymerase pack insert 2004 (www.roche-applied-science.com/packinsert/ 03734927001a.pdf).