Mutation of non-conserved amino acids surrounding catalytic site to shift pH optimum of Bacillus circulans xylanase

Journal of Molecular Catalysis B: Enzymatic

Volumn 55, Issue 3-4, 2008, Pages 130-136

  Kim, Seok Hwan ^a   Pokhrel, Subarna ^a   Yoo, Young Je ^a  

^a Seoul National University   (South Korea)

Author keywords

Bacillus circulans xylanase; Mutation; Non conserved residues; Optimum pH prediction

Indexed keywords

ACIDS; AMINES; AMINO ACIDS; BACTERIOLOGY; CHEMICAL ENGINEERING; FOOD ADDITIVES; INDUSTRIAL APPLICATIONS; ORGANIC ACIDS; TECHNOLOGY;

BACILLUS CIRCULANS; BACILLUS CIRCULANS XYLANASE; CATALYTIC RESIDUES; CATALYTIC SITES; CIRCULANS; ENZYMATIC ACTIVITIES; ENZYME FUNCTIONING; MUTATION; MUTATION SITES; NON-CONSERVED RESIDUES; OPTIMUM PH PREDICTION; PH OPTIMA; PH-DEPENDENCE; STRUCTURAL ALIGNMENTS; XYLANASE; XYLANASES;

ENZYME ACTIVITY;

AMINO ACID; XYLAN ENDO 1,3 BETA XYLOSIDASE;

ARTICLE; BACILLUS CIRCULANS; CATALYSIS; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME ENGINEERING; ENZYME MECHANISM; ENZYME STRUCTURE; PH;

BACILLUS CIRCULANS;

EID: 52049120812     PISSN: 13811177     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molcatb.2008.02.006     Document Type: Article

References (38)

1. Henrissat B., and Bairoch A. Biochem. J. 316 (1996) 695-696
2. Bray M.R., and Clarke A.J. Eur. J. Biochem. 204 (1992) 191-196
3. Torronen A., Kubicek C.P., and Henrissat B. FEBS Lett. 321 (1993) 135-139
4. Torronen A., and Rouvinen J. J. Biotechnol. 57 1 (1997) 137-149
5. Joshi M.D., Sidhu G., Pot I., Brayer G.D., Withers S.G., and McIntosh L.P. J. Mol. Biol. 299 (2000) 255-279
6. Wakarchuk W.W., Campbell R.L., Sung W.L., Davoodi J., and Yaguchi M. Protein Sci. 3 (1994) 467-475
7. Rye C.S., and Withers S.G. Curr. Opin. Chem. Biol. 4 (2000) 573-580
8. Gilkes N.R., Henrissat B., Kilburn D.G., Miller Jr. R.C., and Warren R.A.J. Microbiol. Rev. 55 (1991) 303-315
9. Jackson S.E., and Fersht A.R. Biochemistry 32 (1993) 13909-13916
10. Davoodi J., Wakarchuk W.W., Campbell R.L., Carey P.R., and Surewicz W.K. Eur. J. Biochem. 232 (1995) 839-843
11. Kiick D.M., Harris B.G., and Cook P.F. Biochemistry 25 (1986) 227-236
12. Torronen A., and Rouvinen J. Biochemistry 34 (1995) 847-856
13. de Lemos Esteves F., Ruelle F., Lamotte-Brasseur V., Quinting B., and Frere J.M. Protein Sci. 13 (2004) 1209-1218
14. Esteban R., Villanueva J.R., and Villa T.G. Can. J. Microbiol. 28 (1982) 733-739
15. Tenkanen M., Puls J., and Poutanen K. Enzyme Microb. Technol. 14 (1992) 566-574
16. Cesar T., and Mrsa V. Enzyme Microb. Technol. 19 (1996) 289-296
17. Nielsen P., Fritze D., and Priest F.G. Microbiology 141 (1995) 1745-1761
18. Sakka K., Yoshikawa K., Kojima Y., Karita S., Ohmiya K., and Shimada K. Biosci. Biotechnol. Biochem. 57 (1993) 268-272
19. Magnuson T.S., Roberts M.A., Crawford D.L., and Hertel G. Appl. Biochem. Biotechnol. 28 (1991) 433-443
20. Nakamura S., Nakai R., Namba K., Kubo T., Wakabayashi K., Aono R., and Horikoshi K. Nucleic Acids Symp. Ser. (1995) 99-100
21. Taylor W.R. J. Theor. Biol. 119 (1986) 205-218
22. Klapper I., Hagstrom R., Fine R., Sharp K., and Honig B. Proteins 1 (1986) 47-59
23. Nicholls A., Sharp K., and Honig B. Proteins 11 (1991) 281-296
24. Madura J.D., Briggs J.M., Wade R.C., Davis M.E., Luty B.A., Ilin A., Antosiewicz J., Gilson M.K., Bagheri B., Scott L.R., and McCammon J.A. Comput. Phys. Commun. 91 (1995) 57-95
25. Sham Y.Y., Chu Z.T., and Warshel A. J. Phys. Chem. 101 (1997) 4458-4472
26. Sidhu G., Withers S.G., Nguyen N.T., McIntosh L.P., Ziser L., and Brayer G.D. Biochemistry 38 17 (1999) 5346-5354
27. Joshi M.D., Sidhu G., Nielsen J.E., Brayer G.D., Withers S.G., and McIntosh L.P. Biochemistry 40 (2001) 10115-10139
28. Li Z.L., Terry M.B., and Robert B. Biochem. Biophys. Acta 1460 (2000) 384-389
29. Laemmli U.K. Nature 227 (1970) 680-685
30. Miller G.L. Anal. Chem. 31 (1959) 426-428
31. Krengel U.B., and Dijkstra W. J. Mol. Biol. 263 (1996) 70-78
32. Balakrishnan H., Satyanarayana L., Gaikwad S.M., and Suresh C.G. Enzyme Microb. Technol. 39 (2006) 67-73
33. McIntosh L.P., Hand G., Johnson P.E., Joshi M.D., Korner M., Plesniak L.A., Ziser L., Wakarchuck W.W., and Withers S.G. Biochemistry 35 (1996) 9958-9966
34. Nielsen J.E., and Vriend G. Proteins: Struct. Funct. Genet. 43 (2001) 403-412
35. Sapag A., Wouters J., Lambert C., de Ioannes P., Eyzaguirre J., and Depiereux E. J. Biotechnol. 95 2 (2002) 109-131
36. Muilu J., Torronen A., Perakyla M., and Rouvinen J. Proteins 31 (1998) 434-444
37. Campbell R.L., Rose D.R., Wakarchuk W.W., To R., Sung W.S., and Yaguchi M. In: Suominen P., and Reinikainen T. (Eds). Trichoderma reesei Cellulases and Other Hydrolases vol. 8 (1993), Foundation for Biotechnical and Industrial Fermentation Research, Espoo, Finland 63-72
38. Tina K.G., Bhadra R., and Srinivasan N. Nucleic Acids Res. 35 (2007) W473-W476