메뉴 건너뛰기




Volumn 162, Issue 1, 2008, Pages 40-51

5′ sequence- and chromatin modification-dependent gene expression in Plasmodium falciparum erythrocytic stage

Author keywords

Chromatin modification; Intraerythrocytic cell cycle; Peroxiredoxin; Plasmodium; Transcription factor; Transcriptional regulation

Indexed keywords

DNA BINDING PROTEIN; HISTONE ACETYLTRANSFERASE; PEROXIREDOXIN; PROTOZOAL PROTEIN;

EID: 52049108023     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molbiopara.2008.07.002     Document Type: Article
Times cited : (11)

References (45)
  • 1
    • 15044338866 scopus 로고    scopus 로고
    • The global distribution of clinical episodes of Plasmodium falciparum malaria
    • Snow R.W., Guerra C.A., Noor A.M., Myint H.Y., and Hay S.I. The global distribution of clinical episodes of Plasmodium falciparum malaria. Nature 434 (2005) 214-217
    • (2005) Nature , vol.434 , pp. 214-217
    • Snow, R.W.1    Guerra, C.A.2    Noor, A.M.3    Myint, H.Y.4    Hay, S.I.5
  • 2
    • 0037841805 scopus 로고    scopus 로고
    • The deep roots of eukaryotes
    • Baldauf S.L. The deep roots of eukaryotes. Science 300 (2003) 1703-1706
    • (2003) Science , vol.300 , pp. 1703-1706
    • Baldauf, S.L.1
  • 3
    • 0037015614 scopus 로고    scopus 로고
    • Genome sequence of the human malaria parasite Plasmodium falciparum
    • Gardner M.J., Hall N., Fung E., et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419 (2002) 498-511
    • (2002) Nature , vol.419 , pp. 498-511
    • Gardner, M.J.1    Hall, N.2    Fung, E.3
  • 4
    • 4243071596 scopus 로고    scopus 로고
    • The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum
    • Bozdech Z., Llinas M., Pulliam B.L., Wong E.D., Zhu J., and DeRisi J.L. The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. PLoS Biol 1 (2003) E5
    • (2003) PLoS Biol , vol.1
    • Bozdech, Z.1    Llinas, M.2    Pulliam, B.L.3    Wong, E.D.4    Zhu, J.5    DeRisi, J.L.6
  • 5
    • 0141633042 scopus 로고    scopus 로고
    • Discovery of gene function by expression profiling of the malaria parasite life cycle
    • Le Roch K.G., Zhou Y., Blair P.L., et al. Discovery of gene function by expression profiling of the malaria parasite life cycle. Science 301 (2003) 1503-1508
    • (2003) Science , vol.301 , pp. 1503-1508
    • Le Roch, K.G.1    Zhou, Y.2    Blair, P.L.3
  • 6
    • 0037015602 scopus 로고    scopus 로고
    • A proteomic view of the Plasmodium falciparum life cycle
    • Florens L., Washburn M.P., Raine J.D., et al. A proteomic view of the Plasmodium falciparum life cycle. Nature 419 (2002) 520-526
    • (2002) Nature , vol.419 , pp. 520-526
    • Florens, L.1    Washburn, M.P.2    Raine, J.D.3
  • 7
    • 8744234024 scopus 로고    scopus 로고
    • Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle
    • Le Roch K.G., Johnson J.R., Florens L., et al. Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle. Genome Res 14 (2004) 2308-2318
    • (2004) Genome Res , vol.14 , pp. 2308-2318
    • Le Roch, K.G.1    Johnson, J.R.2    Florens, L.3
  • 8
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • Jenuwein T., and Allis C.D. Translating the histone code. Science 293 (2001) 1074-1080
    • (2001) Science , vol.293 , pp. 1074-1080
    • Jenuwein, T.1    Allis, C.D.2
  • 9
    • 4644353894 scopus 로고    scopus 로고
    • Comparative analysis of apicomplexa and genomic diversity in eukaryotes
    • Templeton T.J., Iyer L.M., Anantharaman V., et al. Comparative analysis of apicomplexa and genomic diversity in eukaryotes. Genome Res 14 (2004) 1686-1695
    • (2004) Genome Res , vol.14 , pp. 1686-1695
    • Templeton, T.J.1    Iyer, L.M.2    Anantharaman, V.3
  • 10
  • 11
    • 4444339460 scopus 로고    scopus 로고
    • Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum
    • Coulson R.M., Hall N., and Ouzounis C.A. Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum. Genome Res 14 (2004) 1548-1554
    • (2004) Genome Res , vol.14 , pp. 1548-1554
    • Coulson, R.M.1    Hall, N.2    Ouzounis, C.A.3
  • 12
    • 0032939607 scopus 로고    scopus 로고
    • Isolation and functional characterization of two distinct sexual-stage-specific promoters of the human malaria parasite Plasmodium falciparum
    • Dechering K.J., Kaan A.M., Mbacham W., et al. Isolation and functional characterization of two distinct sexual-stage-specific promoters of the human malaria parasite Plasmodium falciparum. Mol Cell Biol 19 (1999) 967-978
    • (1999) Mol Cell Biol , vol.19 , pp. 967-978
    • Dechering, K.J.1    Kaan, A.M.2    Mbacham, W.3
  • 13
    • 0037898921 scopus 로고    scopus 로고
    • Identification of nuclear proteins that interact differentially with Plasmodium falciparum var gene promoters
    • Voss T.S., Kaestli M., Vogel D., Bopp S., and Beck H.P. Identification of nuclear proteins that interact differentially with Plasmodium falciparum var gene promoters. Mol Microbiol 48 (2003) 1593-1607
    • (2003) Mol Microbiol , vol.48 , pp. 1593-1607
    • Voss, T.S.1    Kaestli, M.2    Vogel, D.3    Bopp, S.4    Beck, H.P.5
  • 14
    • 1642554364 scopus 로고    scopus 로고
    • Identification of regulatory elements in the Plasmodium falciparum genome
    • Militello K.T., Dodge M., Bethke L., and Wirth D.F. Identification of regulatory elements in the Plasmodium falciparum genome. Mol Biochem Parasitol 134 (2004) 75-88
    • (2004) Mol Biochem Parasitol , vol.134 , pp. 75-88
    • Militello, K.T.1    Dodge, M.2    Bethke, L.3    Wirth, D.F.4
  • 15
    • 31444437901 scopus 로고    scopus 로고
    • Combinatorial gene regulation in Plasmodium falciparum
    • van Noort V., and Huynen M.A. Combinatorial gene regulation in Plasmodium falciparum. Trends Genet 22 (2006) 73-78
    • (2006) Trends Genet , vol.22 , pp. 73-78
    • van Noort, V.1    Huynen, M.A.2
  • 16
    • 20144389848 scopus 로고    scopus 로고
    • Heterochromatin silencing and locus repositioning linked to regulation of virulence genes in Plasmodium falciparum
    • Duraisingh M.T., Voss T.S., Marty A.J., et al. Heterochromatin silencing and locus repositioning linked to regulation of virulence genes in Plasmodium falciparum. Cell 121 (2005) 13-24
    • (2005) Cell , vol.121 , pp. 13-24
    • Duraisingh, M.T.1    Voss, T.S.2    Marty, A.J.3
  • 17
    • 20144389331 scopus 로고    scopus 로고
    • Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites
    • Freitas-Junior L.H., Hernandez-Rivas R., Ralph S.A., et al. Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites. Cell 121 (2005) 25-36
    • (2005) Cell , vol.121 , pp. 25-36
    • Freitas-Junior, L.H.1    Hernandez-Rivas, R.2    Ralph, S.A.3
  • 18
    • 17244382283 scopus 로고    scopus 로고
    • Antigenic variation in Plasmodium falciparum is associated with movement of var loci between subnuclear locations
    • Ralph S.A., Scheidig-Benatar C., and Scherf A. Antigenic variation in Plasmodium falciparum is associated with movement of var loci between subnuclear locations. Proc Natl Acad Sci USA 102 (2005) 5414-5419
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 5414-5419
    • Ralph, S.A.1    Scheidig-Benatar, C.2    Scherf, A.3
  • 19
    • 27944481176 scopus 로고    scopus 로고
    • Histone-modifying complexes regulate gene expression pertinent to the differentiation of the protozoan parasite Toxoplasma gondii
    • Saksouk N., Bhatti M.M., Kieffer S., et al. Histone-modifying complexes regulate gene expression pertinent to the differentiation of the protozoan parasite Toxoplasma gondii. Mol Cell Biol 25 (2005) 10301-10314
    • (2005) Mol Cell Biol , vol.25 , pp. 10301-10314
    • Saksouk, N.1    Bhatti, M.M.2    Kieffer, S.3
  • 20
    • 0034908118 scopus 로고    scopus 로고
    • Molecular characterization of a 2-Cys peroxiredoxin from the human malaria parasite Plasmodium falciparum
    • Kawazu S., Komaki K., Tsuji N., et al. Molecular characterization of a 2-Cys peroxiredoxin from the human malaria parasite Plasmodium falciparum. Mol Biochem Parasitol 116 (2001) 73-79
    • (2001) Mol Biochem Parasitol , vol.116 , pp. 73-79
    • Kawazu, S.1    Komaki, K.2    Tsuji, N.3
  • 21
    • 0033844270 scopus 로고    scopus 로고
    • Molecular cloning and characterization of a peroxiredoxin from the human malaria parasite Plasmodium falciparum
    • Kawazu S., Tsuji N., Hatabu T., Kawai S., Matsumoto Y., and Kano S. Molecular cloning and characterization of a peroxiredoxin from the human malaria parasite Plasmodium falciparum. Mol Biochem Parasitol 109 (2000) 165-169
    • (2000) Mol Biochem Parasitol , vol.109 , pp. 165-169
    • Kawazu, S.1    Tsuji, N.2    Hatabu, T.3    Kawai, S.4    Matsumoto, Y.5    Kano, S.6
  • 22
    • 13844267219 scopus 로고    scopus 로고
    • Expression of mRNAs and proteins for peroxiredoxins in Plasmodium falciparum erythrocytic stage
    • Yano K., Komaki-Yasuda K., Kobayashi T., et al. Expression of mRNAs and proteins for peroxiredoxins in Plasmodium falciparum erythrocytic stage. Parasitol Int 54 (2005) 35-41
    • (2005) Parasitol Int , vol.54 , pp. 35-41
    • Yano, K.1    Komaki-Yasuda, K.2    Kobayashi, T.3
  • 23
    • 17144413378 scopus 로고    scopus 로고
    • Roles of 1-Cys peroxiredoxin in haem detoxification in the human malaria parasite Plasmodium falciparum
    • Kawazu S., Ikenoue N., Takemae H., Komaki-Yasuda K., and Kano S. Roles of 1-Cys peroxiredoxin in haem detoxification in the human malaria parasite Plasmodium falciparum. FEBS J 272 (2005) 1784-1791
    • (2005) FEBS J , vol.272 , pp. 1784-1791
    • Kawazu, S.1    Ikenoue, N.2    Takemae, H.3    Komaki-Yasuda, K.4    Kano, S.5
  • 24
    • 0038643671 scopus 로고    scopus 로고
    • Disruption of the Plasmodium falciparum 2-Cys peroxiredoxin gene renders parasites hypersensitive to reactive oxygen and nitrogen species
    • Komaki-Yasuda K., Kawazu S., and Kano S. Disruption of the Plasmodium falciparum 2-Cys peroxiredoxin gene renders parasites hypersensitive to reactive oxygen and nitrogen species. FEBS Lett 547 (2003) 140-144
    • (2003) FEBS Lett , vol.547 , pp. 140-144
    • Komaki-Yasuda, K.1    Kawazu, S.2    Kano, S.3
  • 25
    • 0017311840 scopus 로고
    • Human malaria parasites in continuous culture
    • Trager W., and Jensen J.B. Human malaria parasites in continuous culture. Science 193 (1976) 673-675
    • (1976) Science , vol.193 , pp. 673-675
    • Trager, W.1    Jensen, J.B.2
  • 26
    • 0018704491 scopus 로고
    • Synchronization of Plasmodium falciparum erythrocytic stages in culture
    • Lambros C., and Vanderberg J.P. Synchronization of Plasmodium falciparum erythrocytic stages in culture. J Parasitol 65 (1979) 418-420
    • (1979) J Parasitol , vol.65 , pp. 418-420
    • Lambros, C.1    Vanderberg, J.P.2
  • 28
    • 0030885188 scopus 로고    scopus 로고
    • Transformation with human dihydrofolate reductase renders malaria parasites insensitive to WR99210 but does not affect the intrinsic activity of proguanil
    • Fidock D.A., and Wellems T.E. Transformation with human dihydrofolate reductase renders malaria parasites insensitive to WR99210 but does not affect the intrinsic activity of proguanil. Proc Natl Acad Sci USA 94 (1997) 10931-10936
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 10931-10936
    • Fidock, D.A.1    Wellems, T.E.2
  • 29
    • 0037124114 scopus 로고    scopus 로고
    • Plasmodium falciparum possesses a cell cycle-regulated short type replication protein A large subunit encoded by an unusual transcript
    • Voss T.S., Mini T., Jenoe P., and Beck H.P. Plasmodium falciparum possesses a cell cycle-regulated short type replication protein A large subunit encoded by an unusual transcript. J Biol Chem 277 (2002) 17493-17501
    • (2002) J Biol Chem , vol.277 , pp. 17493-17501
    • Voss, T.S.1    Mini, T.2    Jenoe, P.3    Beck, H.P.4
  • 30
    • 3042724213 scopus 로고    scopus 로고
    • Plasmodium falciparum histone acetyltransferase, a yeast GCN5 homologue involved in chromatin remodeling
    • Fan Q., An L., and Cui L. Plasmodium falciparum histone acetyltransferase, a yeast GCN5 homologue involved in chromatin remodeling. Eukaryot Cell 3 (2004) 264-276
    • (2004) Eukaryot Cell , vol.3 , pp. 264-276
    • Fan, Q.1    An, L.2    Cui, L.3
  • 31
    • 0026517912 scopus 로고
    • Evidence for kinesin-related proteins in the mitotic apparatus using peptide antibodies
    • Sawin K.E., Mitchison T.J., and Wordeman L.G. Evidence for kinesin-related proteins in the mitotic apparatus using peptide antibodies. J Cell Sci 101 Pt 2 (1992) 303-313
    • (1992) J Cell Sci , vol.101 , Issue.PART 2 , pp. 303-313
    • Sawin, K.E.1    Mitchison, T.J.2    Wordeman, L.G.3
  • 32
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 33
    • 3042756189 scopus 로고    scopus 로고
    • PfADA2, a Plasmodium falciparum homologue of the transcriptional coactivator ADA2 and its in vivo association with the histone acetyltransferase PfGCN5
    • Fan Q., An L., and Cui L. PfADA2, a Plasmodium falciparum homologue of the transcriptional coactivator ADA2 and its in vivo association with the histone acetyltransferase PfGCN5. Gene 336 (2004) 251-261
    • (2004) Gene , vol.336 , pp. 251-261
    • Fan, Q.1    An, L.2    Cui, L.3
  • 35
    • 0037208166 scopus 로고    scopus 로고
    • TRANSFAC: transcriptional regulation, from patterns to profiles
    • Matys V., Fricke E., Geffers R., et al. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res 31 (2003) 374-378
    • (2003) Nucleic Acids Res , vol.31 , pp. 374-378
    • Matys, V.1    Fricke, E.2    Geffers, R.3
  • 36
    • 34447546839 scopus 로고    scopus 로고
    • PfGCN5-mediated histone H3 acetylation plays a key role in gene expression in Plasmodium falciparum
    • Cui L., Miao J., Furuya T., Li X., Su X.Z., and Cui L. PfGCN5-mediated histone H3 acetylation plays a key role in gene expression in Plasmodium falciparum. Eukaryot Cell 6 (2007) 1219-1227
    • (2007) Eukaryot Cell , vol.6 , pp. 1219-1227
    • Cui, L.1    Miao, J.2    Furuya, T.3    Li, X.4    Su, X.Z.5    Cui, L.6
  • 37
    • 0034508137 scopus 로고    scopus 로고
    • Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription
    • Kuo M.H., vom Baur E., Struhl K., and Allis C.D. Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription. Mol Cell 6 (2000) 1309-1320
    • (2000) Mol Cell , vol.6 , pp. 1309-1320
    • Kuo, M.H.1    vom Baur, E.2    Struhl, K.3    Allis, C.D.4
  • 38
    • 0032581751 scopus 로고    scopus 로고
    • Transcriptional activators direct histone acetyltransferase complexes to nucleosomes
    • Utley R.T., Ikeda K., Grant P.A., et al. Transcriptional activators direct histone acetyltransferase complexes to nucleosomes. Nature 394 (1998) 498-502
    • (1998) Nature , vol.394 , pp. 498-502
    • Utley, R.T.1    Ikeda, K.2    Grant, P.A.3
  • 39
    • 0037440195 scopus 로고    scopus 로고
    • The phylogenetic diversity of eukaryotic transcription
    • Coulson R.M., and Ouzounis C.A. The phylogenetic diversity of eukaryotic transcription. Nucleic Acids Res 31 (2003) 653-660
    • (2003) Nucleic Acids Res , vol.31 , pp. 653-660
    • Coulson, R.M.1    Ouzounis, C.A.2
  • 40
    • 25444456367 scopus 로고    scopus 로고
    • Prediction of the general transcription factors associated with RNA polymerase II in Plasmodium falciparum: conserved features and differences relative to other eukaryotes
    • Callebaut I., Prat K., Meurice E., Mornon J.P., and Tomavo S. Prediction of the general transcription factors associated with RNA polymerase II in Plasmodium falciparum: conserved features and differences relative to other eukaryotes. BMC Genomics 6 (2005) 100
    • (2005) BMC Genomics , vol.6 , pp. 100
    • Callebaut, I.1    Prat, K.2    Meurice, E.3    Mornon, J.P.4    Tomavo, S.5
  • 41
    • 0842263778 scopus 로고    scopus 로고
    • The multicoloured world of promoter recognition complexes
    • Muller F., and Tora L. The multicoloured world of promoter recognition complexes. EMBO J 23 (2004) 2-8
    • (2004) EMBO J , vol.23 , pp. 2-8
    • Muller, F.1    Tora, L.2
  • 42
    • 27644484749 scopus 로고    scopus 로고
    • A protein interaction network of the malaria parasite Plasmodium falciparum
    • LaCount D.J., Vignali M., Chettier R., et al. A protein interaction network of the malaria parasite Plasmodium falciparum. Nature 438 (2005) 103-107
    • (2005) Nature , vol.438 , pp. 103-107
    • LaCount, D.J.1    Vignali, M.2    Chettier, R.3
  • 43
    • 23144448511 scopus 로고    scopus 로고
    • Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains
    • Balaji S., Babu M.M., Iyer L.M., and Aravind L. Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains. Nucleic Acids Res 33 (2005) 3994-4006
    • (2005) Nucleic Acids Res , vol.33 , pp. 3994-4006
    • Balaji, S.1    Babu, M.M.2    Iyer, L.M.3    Aravind, L.4
  • 44
    • 46149107652 scopus 로고    scopus 로고
    • Specific DNA-binding by Apicomplexan AP2 transcription factors
    • De Silva E.K., Gehrke A.R., Olszewski K., et al. Specific DNA-binding by Apicomplexan AP2 transcription factors. Proc Natl Acad Sci USA 105 (2008) 8393-8398
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 8393-8398
    • De Silva, E.K.1    Gehrke, A.R.2    Olszewski, K.3
  • 45
    • 0141953974 scopus 로고    scopus 로고
    • Transcription factors as molecular targets: molecular mechanisms of decoy ODN and their design
    • Tomita N., Ogihara T., and Morishita R. Transcription factors as molecular targets: molecular mechanisms of decoy ODN and their design. Curr Drug Targets 4 (2003) 603-608
    • (2003) Curr Drug Targets , vol.4 , pp. 603-608
    • Tomita, N.1    Ogihara, T.2    Morishita, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.